Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1018
(602 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.) 290 5e-89
SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 192 2e-49
SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 3e-34
SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_52466| Best HMM Match : Cation_ATPase_C (HMM E-Value=6.7e-12) 73 2e-13
SB_43063| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_20525| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 58 4e-09
SB_19943| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_33263| Best HMM Match : Hydrolase (HMM E-Value=0.052) 44 1e-04
SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4) 39 0.003
SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85) 33 0.18
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 33 0.24
SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.54
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_53612| Best HMM Match : SRCR (HMM E-Value=0) 30 1.3
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 30 1.7
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 30 1.7
SB_11328| Best HMM Match : PAN (HMM E-Value=7.1e-06) 30 1.7
SB_56051| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_33705| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 2.9
SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2) 29 2.9
SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3) 29 2.9
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.8
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 28 5.1
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_42154| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_6241| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_30955| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_21895| Best HMM Match : E1-E2_ATPase (HMM E-Value=0.008) 28 6.7
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_22208| Best HMM Match : PAAR_motif (HMM E-Value=0.005) 27 8.8
SB_49764| Best HMM Match : HSA (HMM E-Value=2.2) 27 8.8
SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_42324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 290 bits (712), Expect(2) = 5e-89
Identities = 141/164 (85%), Positives = 153/164 (93%)
Frame = +3
Query: 111 LRELNSDQLDEILKFHTEIVFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKAD 290
++++ +D+ILK H EIVFARTSPQQKLIIVEGCQR GAIVAVTGDGVNDSPALKKAD
Sbjct: 126 VQDMTDKDIDDILKNHKEIVFARTSPQQKLIIVEGCQRNGAIVAVTGDGVNDSPALKKAD 185
Query: 291 IGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISP 470
IG+AMGI+GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEI+P
Sbjct: 186 IGIAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP 245
Query: 471 FLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEDAESDIMK 602
FL FI+ IP PLGT+TILCIDLGTDMVPAISLAYE+AESDIMK
Sbjct: 246 FLMFIVAGIPQPLGTITILCIDLGTDMVPAISLAYEEAESDIMK 289
Score = 55.6 bits (128), Expect(2) = 5e-89
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +3
Query: 3 ISEGNETVEDIAARLNIPVSEVNPREAKAAVVHGTELRELNSDQ 134
ISEG ETVEDI+ RL IPV EV+ +A A VVHG EL++L D+
Sbjct: 59 ISEGTETVEDISLRLEIPVEEVDKSQADAIVVHGGELKKLCGDR 102
>SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1003
Score = 192 bits (468), Expect = 2e-49
Identities = 95/118 (80%), Positives = 106/118 (89%)
Frame = +3
Query: 3 ISEGNETVEDIAARLNIPVSEVNPREAKAAVVHGTELRELNSDQLDEILKFHTEIVFART 182
ISEG ETVEDIA RLNIPV EV+ +AKA VVHG++L++ + +++D IL HTEIVFART
Sbjct: 649 ISEGTETVEDIAERLNIPVEEVDETKAKAIVVHGSQLKDYDQEKIDGILCNHTEIVFART 708
Query: 183 SPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILL 356
SPQQKLIIVEGCQR+GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMI L
Sbjct: 709 SPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIFL 766
>SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1154
Score = 142 bits (343), Expect = 3e-34
Identities = 76/167 (45%), Positives = 111/167 (66%)
Frame = +3
Query: 102 GTELRELNSDQLDEILKFHTEIVFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALK 281
G EL L+ QL I+ + VF R SP+ K+ IV+ Q+ G +VA+TGDGVND+ ALK
Sbjct: 640 GEELEALDGLQLSTIIDQVS--VFYRVSPRHKVAIVKALQQHGHVVAMTGDGVNDAVALK 697
Query: 282 KADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPE 461
+ADIG+AMG +G+DVSK+AA+MIL+DD+F +I+ +EEG+ IF N+K + + L+++I
Sbjct: 698 RADIGIAMGKSGTDVSKEAAEMILVDDDFNTIMAAIEEGKGIFYNIKNFVRFQLSTSIAA 757
Query: 462 ISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEDAESDIMK 602
IS +P PL + IL I++ D PA SL E +SD+M+
Sbjct: 758 ISLITISTFLKLPNPLNAMQILWINIIMDGPPAQSLGVEPVDSDVMR 804
>SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 95.9 bits (228), Expect = 2e-20
Identities = 67/167 (40%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Frame = +3
Query: 102 GTELRELN-SDQLDEILKFHTEIVFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPAL 278
G E +L S+Q + L+ +F+R P K IV Q G I A+TGDGVND+PAL
Sbjct: 673 GREFDDLTPSEQREACLRAR---LFSRVEPSHKSKIVTYLQEEGEISAMTGDGVNDAPAL 729
Query: 279 KKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 458
KKA+IGVAMG +G+ V+K A+ EEGR I+DN K+ I Y ++SNI
Sbjct: 730 KKAEIGVAMG-SGTAVAKTAS----------------EEGRSIYDNTKQFIRYLISSNIG 772
Query: 459 EISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEDAESDIM 599
E+ +P L V +L ++L TD PA +L++ +SDIM
Sbjct: 773 EVVSIFLTAALGMPEALIPVQLLWVNLMTDGPPATALSFNPPDSDIM 819
>SB_47271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 5/75 (6%)
Frame = +3
Query: 168 VFARTSPQQKLIIVEGC--QRLGA---IVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 332
V AR+SP+ K +V+G +L IVAVTGDG ND PALKKAD+G AMGIAG+DV+K
Sbjct: 737 VLARSSPEDKYTLVKGIIDSKLNPAREIVAVTGDGTNDGPALKKADVGFAMGIAGTDVAK 796
Query: 333 QAADMILLDDNFASI 377
+A+D+IL DDNF SI
Sbjct: 797 EASDIILTDDNFRSI 811
>SB_52466| Best HMM Match : Cation_ATPase_C (HMM E-Value=6.7e-12)
Length = 573
Score = 72.5 bits (170), Expect = 2e-13
Identities = 41/151 (27%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +3
Query: 168 VFARTSPQQKLIIVEGCQRL-----GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSK 332
V +R +P+ K ++ +R G +VAV GV+D+ L+ AD+G++MG G+D+++
Sbjct: 116 VVSRCTPEGKRSFMQAIRRSRVRREGEVVAVVASGVHDANFLRDADVGLSMGATGTDIAQ 175
Query: 333 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN-IPEISPFLAFILCDIPLPL 509
+A+D++L D F+S++ ++ GR I++ + K + + LT+ + I + IL +
Sbjct: 176 EASDIVLKGDKFSSVLDTIKWGRHIYETVLKFLQFQLTATWVTMIVLIIGAILFQKSI-F 234
Query: 510 GTVTILCIDLGTDMVPAISLAYEDAESDIMK 602
+L ++L D + +++L + DI++
Sbjct: 235 SAAQLLWLNLIMDALASLALTGDHPTDDILR 265
>SB_43063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/117 (34%), Positives = 65/117 (55%)
Frame = +3
Query: 168 VFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADM 347
VFA P K+ + Q G + A+ GDG+NDSPAL +A +G+A+G G+DV+ +AAD+
Sbjct: 6 VFAEVLPSHKVEKIRALQAKGFVTAMVGDGINDSPALAQAHVGIAIG-TGTDVAVEAADI 64
Query: 348 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTV 518
+L+ + + ++ R+ + + A+ L N+ I PF A + PLG V
Sbjct: 65 VLIKSDLMDVAAAIDLSRVTVRRIHLNFAFALLYNMIGI-PFAAGVF----EPLGVV 116
>SB_20525| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1145
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/69 (40%), Positives = 44/69 (63%)
Frame = +3
Query: 237 VAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDN 416
V + GDGVND PAL AD+G+AMG G+ ++ +AAD+ L+ +N A I V G+
Sbjct: 1006 VGMVGDGVNDGPALAAADLGIAMGAGGTALAVEAADVTLMSNNLAKIPELVSLGKFCRTI 1065
Query: 417 LKKSIAYTL 443
+ ++IA ++
Sbjct: 1066 ITQNIALSV 1074
>SB_19943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/99 (29%), Positives = 55/99 (55%)
Frame = +3
Query: 306 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFI 485
G++GSDV+K +AD++LLDDNF SIV ++ GR +++ + K + + T +
Sbjct: 1 GVSGSDVAKDSADVVLLDDNFGSIVWAIKWGRNVYNTVVKFLMFQFTVTWSAFIVVVIGA 60
Query: 486 LCDIPLPLGTVTILCIDLGTDMVPAISLAYEDAESDIMK 602
PLG +L ++L D + +++L + D+++
Sbjct: 61 CVTGRSPLGATQLLWVNLIMDSLASLALTRDFPTDDLLR 99
>SB_41088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +3
Query: 126 SDQLDEILKFHTEIVFARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAM 305
S D IL F VFAR +P+QK +++ + G + + GDG ND ALK A GVA+
Sbjct: 432 SKLFDAILPFVR--VFARVAPKQKELVITRLKSRGYVTLMCGDGTNDVGALKHAHCGVAL 489
>SB_33263| Best HMM Match : Hydrolase (HMM E-Value=0.052)
Length = 335
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Frame = +3
Query: 168 VFARTSPQQKLIIVE-----GCQRLGAIVAVTGDGVNDSPALKKADIGVAM 305
V AR + + K +V+ G R G +VAVTG GV+D P L+KAD+G M
Sbjct: 285 VLARATARDKYTLVKHVMGSGVNRQGEMVAVTGAGVHDGPVLRKADVGFTM 335
>SB_53526| Best HMM Match : Cohesin (HMM E-Value=8.4)
Length = 248
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = -2
Query: 418 KLSKISRPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTA 239
K++ + P+ TPVT +S + + + A P TP++A + A S TP+PVTA
Sbjct: 140 KVNADASPNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTAKVNADTSPTPTPVTA 199
Query: 238 TMAPRRWQPSTMIS 197
+ P ++
Sbjct: 200 KVCVETAPPQVCVA 213
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -2
Query: 418 KLSKISRPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTA 239
K++ + P+ TPVT + +S + + + A P TP++A + A S TP+PVTA
Sbjct: 110 KVNADTSPTPTPVTAKVNVDASPTPTPVTAKVNADASPNPTPVTAKVNADTSPTPTPVTA 169
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = -2
Query: 418 KLSKISRPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTA 239
K++ + P+ TPVT +S + + + A P TP++A + A S P+PVTA
Sbjct: 95 KVNADASPNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTAKVNADASPNPTPVTA 154
Score = 35.1 bits (77), Expect = 0.044
Identities = 29/107 (27%), Positives = 51/107 (47%)
Frame = -2
Query: 559 AGTMSVPRSMQRMVTVPRGRGMSQRMKARKGEISGMFEVRV*AIDFFKLSKISRPSSTPV 380
AG + V S V+ P+GR +A+ S ++ +++ A K++ + P+ TPV
Sbjct: 38 AGKVRVNISANVCVSTPQGRFYGCAERAQAPLFSDIW-LKMTA----KVNVDASPTPTPV 92
Query: 379 TMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTA 239
T +S + + + P TP++A + S TP+PVTA
Sbjct: 93 TAKVNADASPNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTA 139
Score = 34.3 bits (75), Expect = 0.077
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -2
Query: 418 KLSKISRPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTA 239
K++ + P+ TPVT +S + + + P TP++A + S TP+PVTA
Sbjct: 125 KVNVDASPTPTPVTAKVNADASPNPTPVTAKVNADTSPTPTPVTAKVNVDASPTPTPVTA 184
Query: 238 TM-APRRWQPSTMISFCCGEVRANTISV 158
+ A P+ + + C E + V
Sbjct: 185 KVNADTSPTPTPVTAKVCVETAPPQVCV 212
>SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1138
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +3
Query: 165 IVFARTSPQQKLIIVEGCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD--VSKQ 335
++ R +P QK +VE + L + GDG ND ++ AD+G+ GI G + +
Sbjct: 897 VLCCRATPMQKASVVELVRDGLKVMTLAIGDGANDVSMIQMADVGI--GITGQEGMQAVM 954
Query: 336 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 452
A+D + F + + V G +D + K I Y N
Sbjct: 955 ASDFAIARFRFLAQLLLV-HGHWCYDRITKMILYFFYKN 992
>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 165 IVFARTSPQQKLIIVEGCQ-RLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 323
++ R +P QK ++V+ + A+ GDG ND +K A IGV GI+G +
Sbjct: 741 VICCRVTPLQKALVVQLVKDNKKAVTLAIGDGANDVSMIKAAHIGV--GISGQE 792
>SB_31467| Best HMM Match : CTP_transf_2 (HMM E-Value=0.85)
Length = 1459
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 141 EILKFHTEIVFARTSPQQKLIIVE--GCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIA 314
E+ KF ++ R SP QK +V+ + + GDG ND +++A +G+ G+
Sbjct: 1178 EVCKFCMAVLCCRMSPLQKAQVVQLVKVSKEKPVTLAIGDGANDCGMIQEAHVGI--GVM 1235
Query: 315 GSD 323
G +
Sbjct: 1236 GKE 1238
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 32.7 bits (71), Expect = 0.24
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Frame = +3
Query: 15 NETVEDIAARLNIPVSEVNP---REAKAAVVHGTELRELNSDQLDEILKFHTEIVFARTS 185
+E +D+A ++N +E+ REA H TEL EL + E+++ +++ +
Sbjct: 15 DEKTKDLANQINDLKTEIQASEKREADLVTAHKTELEELQTSNESELMRVRSDLEEMTSL 74
Query: 186 PQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 365
Q K + +E + A + S + ++A++ G S+ L D+
Sbjct: 75 LQSKKVDLEKIKEQNEKAAKELTELKGSLSTREAEVESLQGQLKGKTSEINIMNAKLQDS 134
Query: 366 FASIVTGVEE 395
++ T +E
Sbjct: 135 TVALETASQE 144
>SB_56342| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 651
Score = 31.5 bits (68), Expect = 0.54
Identities = 21/88 (23%), Positives = 41/88 (46%)
Frame = +3
Query: 318 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDI 497
S+VS+ L D ++++ E + + +++ + L ++ E FL+ +L +
Sbjct: 162 SEVSQSEEFQALAPDEVVALISSEELNVRAEEEVFEAVMFWLKKDLDERRDFLSELLKHV 221
Query: 498 PLPLGTVTILCIDLGTDMVPAISLAYED 581
LPL LC + T+ + SLA D
Sbjct: 222 RLPLVRPQFLCDRIATEDLVRNSLACRD 249
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -2
Query: 394 SSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTATMAPRRWQ 215
SST VT S+ S P++ +T M+ + + +TPS ++T A
Sbjct: 1868 SSTQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASSTQVTPSVASSTQAAPSVT 1927
Query: 214 PSTMIS 197
PST+++
Sbjct: 1928 PSTLMT 1933
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 403 SRPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTATMAPR 224
S SST VT S+ S A + ++ ++ ++ + + +TPS ++T A
Sbjct: 1825 SAASSTQVTRSVASSTHLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASSTQAAT 1884
Query: 223 RWQPST 206
PST
Sbjct: 1885 SVTPST 1890
>SB_56407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = -2
Query: 418 KLSKISRPSSTPVTMDAKLSSSRIMSAACLETSEPAI-PIATPMSAFLRAGESLTPSPVT 242
KLS ++ S + VT+ AK SSR +S L E + ++ L+ S P+T
Sbjct: 625 KLSAVNSTSYSNVTLIAKWESSRNLSHGILAGYEVIYSSLENSNTSLLKVDNSSAVVPLT 684
Query: 241 ATMAPRRWQPSTMISFCCGEVRANTI 164
T +P T+ +FC VR NT+
Sbjct: 685 VT----DLKPCTVYAFC---VRPNTL 703
>SB_53612| Best HMM Match : SRCR (HMM E-Value=0)
Length = 409
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 433 AIDFFKLSKISRPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSA 284
AI KL ++ +STP T D+ R A +S+P+ P P SA
Sbjct: 356 AILKMKLQGLASSASTPATPDSSPKRKRTRQANSASSSQPSSPHPAPTSA 405
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -2
Query: 403 SRPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTATMAPR 224
+ P STPV+ + ++ ++ ++ E E A P S+TP +T +
Sbjct: 144 ANPLSTPVSTTSTKATQGLLPSSTPEMPETAKPTTVVTQVTTMPNTSVTPLTSPSTSVTQ 203
Query: 223 RWQPSTMIS 197
R +P+T ++
Sbjct: 204 RTRPTTPVT 212
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 56 RFRGESPRSQSRCRPRNRAPRTELRPAR*DP-QVPHRNRVRP 178
R+R S + R R R+R+P++ LR P ++ +R+R RP
Sbjct: 308 RYRDSSSCRRRRSRSRSRSPKSRLRSRSRSPYRIRYRSRSRP 349
>SB_11328| Best HMM Match : PAN (HMM E-Value=7.1e-06)
Length = 435
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -1
Query: 89 GFGFAGIHLGNGNIQTRSN--VLYGL 18
GF IHLGNG+I + N +LYG+
Sbjct: 210 GFNIVAIHLGNGSIHSARNFDILYGV 235
>SB_56051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 201 IIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAM 305
+++ + G + + GDG ND ALK A GVA+
Sbjct: 2 LVITRLKSRGYVTLMCGDGTNDVGALKHAHCGVAL 36
>SB_33705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 15 NETVEDIAARLNIPVSEVNPREAKAAVVHGTELRELNSDQLDEILKFHTEIVFARTSP 188
N+ E IA R+N + PR +H + LNS ++EI ++ +++ RT+P
Sbjct: 641 NQKSETIAKRIN---DDWIPRNGAPEQLHSDQAANLNSQNIEEIFQY-LKVLKTRTTP 694
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 11 R*RDRRGHCCAFEYSRFRGESPRSQSRCRPRNRAPRTELRP 133
R + GHCC+F + +RG S ++ R+R P L P
Sbjct: 2503 RQKSNDGHCCSFPFI-YRGRRYNSCTKAGRRDRRPWCSLTP 2542
>SB_36581| Best HMM Match : HR1 (HMM E-Value=2.2)
Length = 760
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Frame = +2
Query: 437 HPNFEHSRNLPLPCL----HPL-RHSSAPGYSNHPLHRSGNG 547
HP + HSR C+ HP RHS NHP +R G
Sbjct: 205 HPYYRHSRGDHKVCVVLDNHPYYRHSRGDHKDNHPYYRHSRG 246
>SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3)
Length = 474
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = -2
Query: 400 RPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSP 248
RP+ST +T A +SS +A+ TS P++T S A SLTP+P
Sbjct: 133 RPASTSLTTSAAFTSSTSSAAS---TSLTTSPVSTS-STSSAASTSLTPAP 179
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 28.7 bits (61), Expect = 3.8
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 17/86 (19%)
Frame = -2
Query: 427 DFFKLSKISRPSSTPV--------TMDAKLSSSRIMSAACLETSEPAI---------PIA 299
D F+L K+SRP S D LSSS SAA + +P+ P
Sbjct: 508 DNFRLGKLSRPKSMDALDRLGGGRVSDTNLSSS---SAATFDGVQPSAGSHVRYDTSPSL 564
Query: 298 TPMSAFLRAGESLTPSPVTATMAPRR 221
TPMSA R G T SP T+ + RR
Sbjct: 565 TPMSA-RRGGPVQTSSPQTSPILSRR 589
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 29 GHCCAFEYSRFRGESPRSQSRCRPRNRAPRTELRP 133
GHCC+F + +RG S ++ R+R P L P
Sbjct: 606 GHCCSFPFI-YRGRRYNSCTKAGRRDRRPWCSLTP 639
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 29 GHCCAFEYSRFRGESPRSQSRCRPRNRAPRTELRP 133
GHCC+F + +RG S ++ R+R P L P
Sbjct: 2769 GHCCSFPFI-YRGRRYNSCTKAGRRDRRPWCSLTP 2802
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +3
Query: 57 VSEVNPREAKAAVVHGTELRELNSDQLDEILKFHTEIVFARTSPQQKLIIVEGCQRLGAI 236
V+E + +A +V T + L +++ E F+ E+ + P+Q++ + E C++
Sbjct: 492 VTEKSSTNEEAVMVDRTGIN-LKAEETKECSTFNEEVTVDKIGPEQQVGVKEKCRKTKKR 550
Query: 237 VAVTGDGVNDSPALKK 284
V GV +K+
Sbjct: 551 VTADEIGVKSQVEVKE 566
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 329 QAGR*HDSTRRQLRVHRDRCRRRPTDL*QLEEVNRLHP-NFEHSRNLPLPCLHPLRHSSA 505
+A R H+ TR + H L + EV H + H+ +PL LHPL+ ++
Sbjct: 1586 RACRGHEYTRVYVHTHPRSTTSPSAALARACEVMNTHACTYTHTLEVPLARLHPLQEHAS 1645
Query: 506 P 508
P
Sbjct: 1646 P 1646
>SB_42154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 348 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLA 479
+L + N A++ G+E+G I+D L++S T +I E + +LA
Sbjct: 213 LLPESNVAAMCAGIEQGNRIYD-LQRSSLPTRYLSIEEAAGYLA 255
>SB_6241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 382 VTMDAKLSSSR-IMSAACLETSEPAIPIATP 293
VT+D S R +M CL EP+IP TP
Sbjct: 792 VTVDTWCCSERLVMKGNCLYQDEPSIPAPTP 822
>SB_30955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 348 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLA 479
+L + N A++ G+E+G I+D L++S T +I E + +LA
Sbjct: 819 LLPESNVAAMCVGIEQGNRIYD-LQRSSLPTRYLSIEEAAGYLA 861
>SB_21895| Best HMM Match : E1-E2_ATPase (HMM E-Value=0.008)
Length = 659
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 111 LRELNSDQLDEILKFHTEIVFARTSPQQKLIIVEGCQ 221
+RE + D L ++L T VFAR SP+QK +VE Q
Sbjct: 622 IRENDPDLLKKLLVCGT--VFARMSPEQKTHLVEELQ 656
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 307 PIATPMSAFLRAGESLTPSPVTATMAPRRWQPSTMISF 194
P+ P ++ + TPSP T +P +P+T + F
Sbjct: 31 PVTAPGKHINKSSKPFTPSPPRCTPSPLPRRPNTTVGF 68
>SB_22208| Best HMM Match : PAAR_motif (HMM E-Value=0.005)
Length = 316
Score = 27.5 bits (58), Expect = 8.8
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 4/170 (2%)
Frame = +3
Query: 3 ISEGNETVEDIAARLNIPVSEVNPREAKAAVVHGTELRELNSD----QLDEILKFHTEIV 170
+ EG+E V + + +EV ++ AAVV G E+ ++SD + DE++ ++
Sbjct: 112 VVEGDEVVVVDSDTAVVEGNEVVVVDSDAAVVEGDEVVVVDSDAAVVEGDEVVVVDSD-- 169
Query: 171 FARTSPQQKLIIVEGCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMI 350
A K+++V+ A+V VNDS A + G +V+ A +I
Sbjct: 170 -AAVVEGDKVVVVDSD---AAVVERDKVVVNDSDAAV---------VDGDEVAVVAWSLI 216
Query: 351 LLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIP 500
LDD+ A + F K+ A+ + PE S L+ L DIP
Sbjct: 217 -LDDSSAIFQFDDRQATSFFRGKGKASAWNVWEASPEASSALS-ALSDIP 264
>SB_49764| Best HMM Match : HSA (HMM E-Value=2.2)
Length = 342
Score = 27.5 bits (58), Expect = 8.8
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Frame = +3
Query: 51 IPVSEVNP---REAKAAVVHGTELRELNSDQLDEILKFHTEIVFARTSPQQKLIIVEGCQ 221
+ VSE P R+ K VV T ++LN+D + E+ + + + I+V+G
Sbjct: 14 VEVSEEVPKKKRKKKQKVVSNTSEKDLNNDDISEMAGKEAALSSQKMNANNLEILVDGDS 73
Query: 222 RLGAIVAVTGDGVNDSPALKK------ADIGVAMGIAGSDVSKQAA-----DMILLDDNF 368
+ ++ A G +S K+ D + G++ S S+ A D+++ DDN
Sbjct: 74 Q-SSLEAQRDTGHKNSKVSKRNKRKQQKDSVLENGVSDSHKSETEACLSTRDIVMEDDNA 132
Query: 369 ASIVTGVEE 395
G +E
Sbjct: 133 PKQTDGAKE 141
>SB_48138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1913
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = -2
Query: 418 KLSKISRPSSTPVTMDAKLSSSRIMSAACLETSEPAIPIATPMSAFLRAGESLTPSPVTA 239
K S S SS P T + + + +C E + P A+P S L P P A
Sbjct: 720 KGSPTSEKSSRPATRGRPSTGRKPSAKSCPEQDKKQAPAASPKSKSAVEAPELPPRPSVA 779
Query: 238 TMAPRRWQPSTMIS 197
+ +P+T++S
Sbjct: 780 S------KPTTLLS 787
>SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 228 GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLD-DNFASIVTGVEEGRL 404
G +V + ++ P ++ D+G MG+ G D +K D + + +N ++ + VEE
Sbjct: 262 GVLVPIRDHDLHVKPGVRIDDMGHKMGLNGVDNAKFYFDNVHVPRENLLNVYSEVEEDGT 321
Query: 405 IFDNLKKSI 431
+++ SI
Sbjct: 322 YTTSIEGSI 330
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,366,817
Number of Sequences: 59808
Number of extensions: 439029
Number of successful extensions: 2339
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2323
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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