BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1018 (602 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 25 0.57 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.0 EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 4.0 AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 9.3 >DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor 2 protein. Length = 581 Score = 25.0 bits (52), Expect = 0.57 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +3 Query: 390 EEGRLIFDNLKKSIAYTLTSNIPEISPFLAFIL 488 + G +I D + S+ +TL + EIS L F+L Sbjct: 200 KNGSVILDTARCSMKWTLIEHAFEISTMLFFVL 232 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 22.6 bits (46), Expect = 3.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -2 Query: 592 SDSASS*AREMAGTMSVPRSMQRMV 518 SDS SS AGT+S + +RMV Sbjct: 1071 SDSGSSNGSWTAGTVSQQKQKRRMV 1095 >EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein protein. Length = 1010 Score = 22.2 bits (45), Expect = 4.0 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +3 Query: 297 VAMGIAGSDVSKQAADMILLD 359 VA+G+ +V ++AAD LL+ Sbjct: 11 VALGVCAPNVKQRAADQDLLN 31 >AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly protein 8 protein. Length = 416 Score = 21.0 bits (42), Expect = 9.3 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -2 Query: 100 WTTAALASRGFTSETGIFKRAAMSSTVSL 14 +TT + FT ++GIF A T +L Sbjct: 235 YTTFTINGESFTLQSGIFGMALSPLTQNL 263 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 164,727 Number of Sequences: 438 Number of extensions: 3392 Number of successful extensions: 5 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17726685 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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