Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1017
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    24   4.0  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    23   7.0  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   9.2  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.2  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   9.2  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   9.2  

>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +1

Query: 88  TISNLLFRDKTRARVFTLMQCLQPLVERTSHFTHTEC*SKFPGSRFAKD 234
           T+S      K R     +++C   +V+  +H T  EC  K    RF  D
Sbjct: 139 TLSPTFTGSKMRQMFAMILECSDNMVQALAHPTGRECEVKDLFIRFTND 187


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +3

Query: 288 RSIAPQ*KAARQLRRRHDALVNARRDSTECASRRGDEKD 404
           + +AP+ +  + +R R + +V+ + +     SRRG E++
Sbjct: 247 KPVAPKVEPKKMIRYRDNKIVSFKGERYTEVSRRGGEEE 285


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 48  GCSTSLIQSHSKINHIKLTVSGQDASTCF 134
           GC    I S  K+ HI++  S   +S  +
Sbjct: 137 GCEVGFIPSPVKLEHIRMQASAARSSKLY 165


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 27  HAQYRLTGCSTSLIQSHSKINHIKL 101
           H+Q  +T C TS  Q  S I+ + L
Sbjct: 37  HSQSVITDCDTSKCQPLSNISEVSL 61


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 355 RGAILQSAQADGAMKRMRGNRGA 423
           RGA +   Q+DG + RM   RGA
Sbjct: 266 RGADVLFMQSDGGLTRMEHFRGA 288


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 355 RGAILQSAQADGAMKRMRGNRGA 423
           RGA +   Q+DG + RM   RGA
Sbjct: 266 RGADVLFMQSDGGLTRMEHFRGA 288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,389
Number of Sequences: 2352
Number of extensions: 14184
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)