Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1014
(784 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 246 1e-65
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 207 9e-54
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 207 9e-54
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 201 4e-52
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 156 2e-38
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 155 4e-38
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 125 3e-29
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 103 2e-22
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 99 5e-21
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 93 2e-19
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 69 4e-12
09_04_0030 + 13940168-13940250,13940703-13941714 53 2e-07
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 47 1e-05
09_04_0029 - 13932414-13933416,13933821-13933903 45 6e-05
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 45 8e-05
09_04_0028 - 13928542-13929538,13929736-13929818 44 1e-04
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 43 2e-04
09_04_0031 + 13946692-13946774,13947007-13948012 42 6e-04
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 42 6e-04
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 42 7e-04
03_01_0012 - 101584-101898,102274-102531,102932-103474 41 0.001
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 36 0.048
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 33 0.19
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 33 0.19
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 31 1.4
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 1.8
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 30 1.8
12_01_1019 - 10398880-10399314,10399401-10399481,10399560-103996... 29 5.5
03_02_0747 + 10888358-10888481,10888529-10888609,10889011-108892... 29 5.5
09_04_0643 + 19176561-19176644,19176761-19176902,19178084-191781... 28 7.3
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 7.3
08_02_0538 - 18321101-18321128,18321767-18322587 28 9.6
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 246 bits (603), Expect = 1e-65
Identities = 117/200 (58%), Positives = 140/200 (70%), Gaps = 1/200 (0%)
Frame = +2
Query: 128 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 307
ST G+VI C AAVAWEA +P++IE+++V PP+AGEVRVKI T +CHTD YT SGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 308 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 487
+FP +L T V+PGDHV+P Y +C CKFC + KTNLC KVR+ G
Sbjct: 64 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123
Query: 488 QGV-MPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLNKVCLLGCGVPT 664
GV M D RF G+ +YHFMG STFSQYTVV ++S+ K+ APL+KVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183
Query: 665 GYGAALNTAKVEPGSNCAIF 724
G GA NTAKVE GS AIF
Sbjct: 184 GLGAVWNTAKVEAGSIVAIF 203
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 207 bits (505), Expect = 9e-54
Identities = 100/202 (49%), Positives = 128/202 (63%), Gaps = 2/202 (0%)
Frame = +2
Query: 125 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 304
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVR+KI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRLKILYTALCHTDVYFWEAKGQT 60
Query: 305 GVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQ 484
VFP + T + PGDHV+P++ +C C+ CL+ ++NLC +R
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTELSPGDHVLPVFTGECGDCRHCLSEESNLCDLLRINT 120
Query: 485 GQGVM-PDGTRRFRCK-GQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLNKVCLLGCGV 658
+G M DG RF + GQ +YHF+G STFS+YTVV + K+ AAPL+KVC+L CG+
Sbjct: 121 DRGAMIGDGQTRFTARGGQPVYHFLGTSTFSEYTVVHVGCVAKIHPAAPLDKVCVLSCGI 180
Query: 659 PTGYGAALNTAKVEPGSNCAIF 724
TG+GA +N AK G AIF
Sbjct: 181 STGFGATVNVAKPPKGCTVAIF 202
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 207 bits (505), Expect = 9e-54
Identities = 99/201 (49%), Positives = 127/201 (63%), Gaps = 1/201 (0%)
Frame = +2
Query: 125 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 304
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQT 60
Query: 305 GVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQ 484
VFP +L T + PGDHV+P++ +C C C + ++N+C +R
Sbjct: 61 PVFPRILGHEAGGIVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINV 120
Query: 485 GQGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLNKVCLLGCGVP 661
+GVM DG RF KG+ ++HF+G STFS+YTV+ L K+ APL+KVC+L CG
Sbjct: 121 DRGVMIGDGKSRFTIKGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCILSCGFS 180
Query: 662 TGYGAALNTAKVEPGSNCAIF 724
TG+GA +N AK + G AIF
Sbjct: 181 TGFGATVNVAKPKKGQTVAIF 201
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 201 bits (491), Expect = 4e-52
Identities = 97/201 (48%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +2
Query: 125 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 304
M+T GKVIKC AAVAWEA KPL IEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 60
Query: 305 GVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQ 484
VFP + T + PGDHV+P++ +C C C + ++N+C +R
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINT 120
Query: 485 GQGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLNKVCLLGCGVP 661
+GVM DG RF G+ +YHF+G STFS+YTV+ + K+ AAPL+KVC+L CG+
Sbjct: 121 DRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGIS 180
Query: 662 TGYGAALNTAKVEPGSNCAIF 724
TG GA +N AK GS AIF
Sbjct: 181 TGLGATINVAKPPKGSTVAIF 201
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 156 bits (378), Expect = 2e-38
Identities = 87/212 (41%), Positives = 114/212 (53%), Gaps = 8/212 (3%)
Frame = +2
Query: 113 SSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 292
+ A T GK IKC AAVA G+ L +EE+EV PP EVR+K+ T +CHTD G
Sbjct: 14 NGAGADTKGKPIKCKAAVAHGPGEALVMEEVEVAPPARMEVRLKVLFTSICHTDLSAWKG 73
Query: 293 KDP-EGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQK 469
++ + FP +L + PGDHVVP++ +C C +C + K+NLC+
Sbjct: 74 ENELQRKFPRILGHEAAGVVESVGEGVEDLAPGDHVVPIFTGECGACTYCESSKSNLCKT 133
Query: 470 VRSTQGQGVM-PDGTRRF----RCKGQE--LYHFMGCSTFSQYTVVLEISLCKVAEAAPL 628
R + M DG RF R G +YHF+ STF++YTV+ K+ APL
Sbjct: 134 YRVNPFKSTMVTDGGTRFTMIDRSSGARNPVYHFLNTSTFAEYTVIDSACAVKINPKAPL 193
Query: 629 NKVCLLGCGVPTGYGAALNTAKVEPGSNCAIF 724
K+ LL CGV TG GAA NTA V GS AIF
Sbjct: 194 EKMSLLSCGVSTGVGAAWNTANVSKGSTVAIF 225
>02_05_0070 - 25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 155 bits (376), Expect = 4e-38
Identities = 75/203 (36%), Positives = 113/203 (55%), Gaps = 1/203 (0%)
Frame = +2
Query: 119 AVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKD 298
A S+ I C AAVAW G+ L +EE+EV PP+A E+RVK+ +T +C +D
Sbjct: 615 AAASSPAAAITCRAAVAWAPGQALVMEEVEVAPPEAMEIRVKVVSTSICRSDVTQWQSTA 674
Query: 299 PEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS 478
+FP + T + GDHV+ +++ +C +CK C++ K+N+CQK+
Sbjct: 675 QTDLFPRIFGHEASGVVESVGEGVTEFEVGDHVLTVFIGECMSCKHCVSGKSNMCQKL-G 733
Query: 479 TQGQGVM-PDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLNKVCLLGCG 655
+ +GVM D RF +G+ +YH+ S+FS+YTVV KV P++++CLL CG
Sbjct: 734 LERRGVMHSDQKTRFSLRGKPVYHYCAVSSFSEYTVVHSGCAVKVGPTVPMDRICLLSCG 793
Query: 656 VPTGYGAALNTAKVEPGSNCAIF 724
V G GAA A + GS+ IF
Sbjct: 794 VSAGLGAAWKVADISKGSSVVIF 816
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 125 bits (302), Expect = 3e-29
Identities = 73/177 (41%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
Frame = +2
Query: 140 KVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPV 319
K I+C AAV A +PL +EEI VDPPKA E+R+KI T +CHTD DP FP
Sbjct: 7 KPIRCKAAVCRAASEPLIVEEIVVDPPKAYEIRIKIICTSLCHTDVTLWHKVDP--AFPR 64
Query: 320 VLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM 499
+L + GD VVP ++ QC++C C TN C V T G G+
Sbjct: 65 ILGHEAYGVVESVGENVEGLAAGDTVVPTFMGQCDSCASCAAEWTNQCTAVPFTMGPGMR 124
Query: 500 PDGTRRF-RCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLNKVCLLGCGVPTG 667
DGT RF +G+ L + ++FSQYTVV + KV A P CLLGC TG
Sbjct: 125 RDGTTRFWDGEGKPLSDTVAVTSFSQYTVVDVNQVVKVDPAVPPKIACLLGCCGGTG 181
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 103 bits (246), Expect = 2e-22
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +2
Query: 386 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCK-GQELYHFMGCS 562
GD VVP ++ QC C C + ++N+C R G+ DGT RFR + G ++HF+G S
Sbjct: 31 GDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMPRDGTARFRDRHGAPIHHFLGVS 90
Query: 563 TFSQYTVVLEISLCKVAEAAPLNKVCLLGCGVPTGYGAALNTAKVEPGSNCAIF 724
+FS+YTVV + +V A P LL CG TG GAA AKVEPGS+ AIF
Sbjct: 91 SFSEYTVVDANQVVRVDPAVPPATASLLSCGATTGVGAAWKLAKVEPGSSVAIF 144
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 98.7 bits (235), Expect = 5e-21
Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Frame = +2
Query: 161 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXXX 340
AV WE G+PL++E+ + PKAGE+ +K A GVCH+D + L G+ P VV
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLKGELPFSSPCVVGHEITG 112
Query: 341 XXXXXXXXXXTSV----KPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPD 505
+ G HVV ++ C C +C+ + +LC+ + + +G + D
Sbjct: 113 EVVDHGTHTPAEIINRFPVGSHVVGAFIMPCGNCFYCVKGQEDLCESFFAYNRAKGTLYD 172
Query: 506 G-TRRF-RCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLNKVCLLGCGVPTGYGAA 679
G TR F R G+ +Y + ++Y VV +L + + P + +LGC V T YGA
Sbjct: 173 GQTRLFLRSNGKPVYMY-SMGGLAEYCVVPANALAVLPNSLPYTESAILGCAVFTAYGAL 231
Query: 680 LNTAKVEPGSNCAI 721
+ A++ G + A+
Sbjct: 232 RHAAEMRAGDSVAV 245
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 93.1 bits (221), Expect = 2e-19
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Frame = +2
Query: 395 VVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMP-DGTRRFRC--KGQELYHFMGCST 565
VVP++ QC+ C CL+ ++NLC K+ + G +MP D T RF G+ + HF+ S+
Sbjct: 2 VVPVFAAQCSECPDCLSDRSNLCSKLPNVAG--LMPRDRTTRFSSVSTGEPIRHFLSVSS 59
Query: 566 FSQYTVVLEISLCKVAEAAPLNKVCLLGCGVPTGYGAALNTAKVEPGSNCAIF 724
F++YTVV + K+ P CLL CG+ TG GAA A VEPGS+ A+F
Sbjct: 60 FAEYTVVDITHIVKLDVGFPPAMACLLSCGISTGVGAAWKVAAVEPGSSVAVF 112
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +2
Query: 146 IKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFP 316
I+C AAV AG+PL++EEI VDPPKA EVR+KI T +CH+D +D GVFP
Sbjct: 9 IRCKAAVCRAAGEPLAVEEIVVDPPKAHEVRIKIVCTSLCHSDVTFWRMQDFPGVFP 65
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 53.2 bits (122), Expect = 2e-07
Identities = 52/195 (26%), Positives = 72/195 (36%), Gaps = 7/195 (3%)
Frame = +2
Query: 158 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLX 328
AAV W A LS K +V +K+ G+CHTD + + ++PVV
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPG 66
Query: 329 XXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPD 505
T K GD V V +V C C+ C N N C K+ +T
Sbjct: 67 HEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTT-------- 118
Query: 506 GTRRFRCKGQELYHFMGCST---FSQYTVVLEISLCKVAEAAPLNKVCLLGCGVPTGYGA 676
C G + H G +T FS VV E + +V PL+ L C T Y
Sbjct: 119 ------CNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSP 172
Query: 677 ALNTAKVEPGSNCAI 721
+ PG + +
Sbjct: 173 MVIHGLNAPGKHVGV 187
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 47.2 bits (107), Expect = 1e-05
Identities = 51/189 (26%), Positives = 72/189 (38%), Gaps = 4/189 (2%)
Frame = +2
Query: 167 AWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXX 337
AW A P LS + ++ +V ++IT GVC+ D ++P+V
Sbjct: 12 AWAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNNSMYPLVPGHEI 71
Query: 338 XXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTR 514
S K GDHV V YV C C+ C + N C + T GV DGT
Sbjct: 72 AGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFT-FNGVDTDGT- 129
Query: 515 RFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLNKVCLLGCGVPTGYGAALNTAK 694
KG +S + VV E K+ + PL K L C T Y +
Sbjct: 130 --VTKG----------GYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNM 177
Query: 695 VEPGSNCAI 721
+PG + +
Sbjct: 178 NQPGKSLGV 186
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 45.2 bits (102), Expect = 6e-05
Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Frame = +2
Query: 158 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVLX 328
AAV W A LS K +V +K+ G+CHTD + + ++PVV
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPG 66
Query: 329 XXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLC 463
T K GD V V +V C TC C N C
Sbjct: 67 HEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYC 112
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 44.8 bits (101), Expect = 8e-05
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Frame = +2
Query: 203 IEVDPPKAGE--VRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTS 376
I + K G+ V +K+ G+CH+D +T+ + V+PVV
Sbjct: 38 IRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVAR 97
Query: 377 VKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRF 520
K GD V V V C C+ C + N C V DGTR +
Sbjct: 98 FKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTY 146
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 230 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHV-VPL 406
+V +K+ G+CHTD +T+ + ++PVV T K GD V V
Sbjct: 34 DVTIKVLYCGICHTDLHTIKNEWGNAMYPVVPGHEIVGVVAGVGAGVTRFKAGDTVGVGY 93
Query: 407 YVPQCNTCKFCLNPKTNLC 463
+V C C C N C
Sbjct: 94 FVDSCRACDSCGKGDENYC 112
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Frame = +2
Query: 116 SAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK 295
+A + G+ + + A ++ LS I +V +KI G+CH+D + + +
Sbjct: 4 TAASAAAGEEQQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNE 63
Query: 296 DPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKV 472
++P+V T K GD V V V C +C+ C N N C +
Sbjct: 64 WKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEG 123
Query: 473 RSTQGQGVMPDGT 511
T V DGT
Sbjct: 124 VFTY-NSVDKDGT 135
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +2
Query: 230 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHV-VPL 406
+V +K+ G+CHTD + + + ++PVV T K GD V V
Sbjct: 34 DVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGY 93
Query: 407 YVPQCNTCKFCLNPKTNLC 463
+V C C C N C
Sbjct: 94 FVDSCRACDSCGKGYENYC 112
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 41.9 bits (94), Expect = 6e-04
Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 1/148 (0%)
Frame = +2
Query: 230 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHV-VPL 406
+V +KI G+CH+D +++ + +P+V T K GD V V
Sbjct: 32 DVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGC 91
Query: 407 YVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVV 586
V C++C C N C V T V DGT + +S VV
Sbjct: 92 MVNSCHSCDSCNQGLENHCPGVIFTY-NSVDKDGTVTY-------------GGYSSMVVV 137
Query: 587 LEISLCKVAEAAPLNKVCLLGCGVPTGY 670
E + + EA PL+K L C T Y
Sbjct: 138 HERFVVRFPEAMPLDKGAPLLCAGITVY 165
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 230 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHV-VPL 406
+V +K+ G+CHTD + + ++PVV K GD V V
Sbjct: 37 DVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGC 96
Query: 407 YVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGT 511
C C+ C + N C KV T G+ DG+
Sbjct: 97 IAASCLDCEHCRRSEENYCDKVALTY-NGIFWDGS 130
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 143 VIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 292
V+KC+ + L E++EV PK GE+R+K TA GV D Y G
Sbjct: 46 VVKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQG 95
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 35.5 bits (78), Expect = 0.048
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 188 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 304
L+ EE+E+ P GE+R+K A GV + D Y +G E
Sbjct: 30 LTWEEVEIGEPSEGEIRIKNKAIGVNYVDIYYRTGLHQE 68
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
Frame = +2
Query: 167 AWEAGK-PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF---PVVLXXX 334
AW K L I ++ P +VRV++ A G+C +D + L P+V+
Sbjct: 26 AWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMVIGHE 85
Query: 335 XXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 475
T + GD V C C+ C + NLC+ ++
Sbjct: 86 CAGVIEEVGSGVTHLAVGDRVALEPGISCWRCRHCKGGRYNLCEDMK 132
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 33.5 bits (73), Expect = 0.19
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Frame = +2
Query: 230 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLY 409
+V VKI G+CH+D T+ + +PVV GD V Y
Sbjct: 34 DVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGY 93
Query: 410 VPQ-CNTCKFCLNPKTNLCQKVRSTQGQGVMPDG 508
+ C C C + N C + +PDG
Sbjct: 94 IASTCRACANCRDGFENYCAGL-VPSFNAALPDG 126
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 158 AAVAWEAGKPLSIEEIEVD----PPKAGEVRVKITATGVCHTDAYTLSGKDP 301
A V AG P +EE +V PP GEV V ++A GV D G+ P
Sbjct: 3 AVVIARAGGPEVLEERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYP 54
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 80 TIISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATG 259
T I CD L+ + T G V K ++W P ++ +E G+ V+++
Sbjct: 347 TFIREVCDLPLAEDIPITSGSVRKGKRLISWRPDMPSTLYWVEAQ--DGGDANVEVSPRD 404
Query: 260 VCHTD-AYTLSGKDPE 304
+ + + A L+G+ P+
Sbjct: 405 IVYMELADPLNGEKPQ 420
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +2
Query: 230 EVRVKITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHV-VPL 406
+V VK+ G+CHTD + +P+V T GD V V +
Sbjct: 36 DVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGV 95
Query: 407 YVPQCNTCKFCLNPKTNLCQK 469
V C C C C K
Sbjct: 96 IVGCCRECHPCKANVEQYCNK 116
>12_01_1019 -
10398880-10399314,10399401-10399481,10399560-10399652,
10399784-10399999,10403837-10403935,10404244-10404867,
10404946-10405033,10405167-10405430,10406437-10406504
Length = 655
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +3
Query: 156 WPQSRGKQASRCP-SRRLKWTRQKPVKCALR-SRPPESAILTRIHSP--EKILRECFL*Y 323
WP R Q S CP ++ + + K +K L S P L + S + C+ Y
Sbjct: 358 WPP-RNSQPSNCPQTQHVSTSNSKKMKFNLDLSEPHVKGCLELLFSSSYKTFHHRCYTHY 416
Query: 324 WDMKAAESWRVSVRESLQSSPGTT*YLC 407
+S R S E L+ PG +LC
Sbjct: 417 LKSGGGDSTRNSPYEPLRDRPGDWTWLC 444
>03_02_0747 +
10888358-10888481,10888529-10888609,10889011-10889227,
10889350-10889460,10889615-10889660,10889744-10889853,
10889926-10890429,10891466-10891594,10891934-10892230,
10892322-10892680,10892968-10893016,10893124-10893184,
10893429-10893578,10893659-10893796,10894525-10894805,
10895005-10895050
Length = 900
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 86 ISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVC 265
I CD L+ + V K ++ W KP + +E G+ +V+++ +
Sbjct: 360 IRELCDLPLAEDIPIATSSVRKGKRSIYWRPDKPAMLYWVETQ--DGGDAKVEVSPRDIV 417
Query: 266 HTD-AYTLSGKDPE 304
+ + A ++G+ PE
Sbjct: 418 YMENAEPINGEQPE 431
>09_04_0643 +
19176561-19176644,19176761-19176902,19178084-19178172,
19178470-19179195
Length = 346
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Frame = +2
Query: 149 KCLAAVAWE--AGKPLSIEEIEVD--PPKAGEVRVKITATGVCHTDAYTLSGKDPEGV-- 310
K + AV ++ G P ++ +EV PK GE+ +K+ A + D G +
Sbjct: 10 KTMRAVQYDKYGGGPEGLKHVEVPIPAPKEGELLIKMEAASINPIDWKIQKGMLRLFLPK 69
Query: 311 -FPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQC 421
FP + + KPGD VV + P C
Sbjct: 70 KFPFIPVGDLSGEVVELGGGVSGFKPGDKVVSMSFPNC 107
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 480 VERTFWHKLVFGFKQNLHVLHCGTYRGT 397
V + WH+LV G L ++ G+ RGT
Sbjct: 1112 VPSSIWHRLVAGLNAQLRLVRRGSLRGT 1139
>08_02_0538 - 18321101-18321128,18321767-18322587
Length = 282
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 300 GSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDS 187
G F + SV Q P+ ILT+ +P+ + S SS+D+
Sbjct: 222 GQFDYAALVSVSQRPIRDILTKIAPSVIPTDSSSSLDT 259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,416,637
Number of Sequences: 37544
Number of extensions: 492120
Number of successful extensions: 1301
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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