Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1013
         (456 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    27   0.41 
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   1.7  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    24   2.2  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   2.9  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.6 bits (56), Expect = 0.41
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 241 NSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLA 372
           NSSE ++   ATGN  TN +  +  +  ++  +P  V+    LA
Sbjct: 806 NSSERMLPSGATGNNSTNSAYSMQSHQQQQHHQPSAVSNSNGLA 849


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 251 KVLLVGGRLAMK*PTTPLLYTSITPVNAVSLSMLLW 358
           ++L   G LA++  +TP+L T+ T     +   +LW
Sbjct: 413 ELLRAYGNLALRRTSTPMLSTTTTTTTNRTAETILW 448


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 74  VEMQILTELSAPYWARATKEWWK 142
           + + +LT L+A YW R    +W+
Sbjct: 3   ISLLVLTLLAAVYWIRQRLAYWE 25


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -2

Query: 437  PCFPFGTPNGTQTYARKPIRPPASEVS-RVTWTGSRHSR 324
            P  P+G  NGT +    P  PP S  S R+T  G   +R
Sbjct: 1120 PRTPYGLSNGTSS----PALPPKSPTSQRITLPGRYEAR 1154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,858
Number of Sequences: 2352
Number of extensions: 12440
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)