Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1011
         (466 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   7.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   9.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   9.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    20   9.8  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 94  SVCHASFPSAR*RHAS*YYSLINHSIEHE 8
           S CH  F S+   + S Y S   H ++H+
Sbjct: 136 SSCHQGFSSSTWCNYSAYSSASRHHVDHQ 164


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 222 VHAYSPHTTFVWRYLEV 172
           VHA +  +TF W +++V
Sbjct: 91  VHAITIRSTFSWTFIDV 107


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 208 RVRVHLPDHYPFKSPSIGFMNKVYHP 285
           R R H P+ YP + P I   +  Y P
Sbjct: 20  RKRPHSPEPYPPRCPPIYEPSCQYSP 45


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 37  NSITKHVVTERWETTHGT 90
           N  T+H++  R  T H T
Sbjct: 267 NRFTRHLIQRRTHTRHTT 284


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 334 AWTALYDLSNIFESFLP 384
           A+T  YDL+  FE+ LP
Sbjct: 423 AFTIGYDLNQHFETGLP 439


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 44   SRSMSSPSAGKRRMAH 91
            SR +++PSA +R +AH
Sbjct: 1912 SRLVNNPSARRRFIAH 1927


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 232 DREGARVLSTHHLRMALPGGPKNF 161
           + +  R+L   H+ +A PG  K+F
Sbjct: 276 NHQRGRILGGCHILVATPGRLKDF 299


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 128 HFVLAFDKFDDIGVPCVVSQRSVTTCFVI 42
           +FV+   + D I   C +    + TC++I
Sbjct: 33  NFVIISPRCDKISAICFLLSTILGTCWII 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,364
Number of Sequences: 336
Number of extensions: 2506
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)