Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1011
(466 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 153 1e-38
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 85 5e-18
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 85 7e-18
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 81 1e-16
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 79 2e-16
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 78 8e-16
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 75 7e-15
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 73 3e-14
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 64 8e-12
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 58 9e-10
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 54 8e-09
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 51 8e-08
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 33 0.028
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 31 0.11
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 28 0.81
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 3.3
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 26 3.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 3.3
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 26 3.3
SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo... 25 4.3
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 25 5.7
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 7.5
SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces pomb... 25 7.5
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 7.5
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 153 bits (371), Expect = 1e-38
Identities = 62/94 (65%), Positives = 78/94 (82%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TPY GG+W+V V LP YP+KSPSIGF+N+++HPNIDE+SG+VCLDVINQ W+ ++D+ N
Sbjct: 42 TPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMIN 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
IFE FLPQLL YPN DPLNG+AAA+ L +P Y
Sbjct: 102 IFEVFLPQLLRYPNASDPLNGEAAALLLREPNTY 135
Score = 33.1 bits (72), Expect = 0.021
Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +3
Query: 90 TDVIKLIESKHEVTILS-GLNEFCVKFFGP 176
TDV+KL+ S +EVT+++ + EF V+F GP
Sbjct: 10 TDVMKLLMSDYEVTLVNDNMQEFYVRFHGP 39
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 85.0 bits (201), Expect = 5e-18
Identities = 34/94 (36%), Positives = 55/94 (58%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TPYEGG + V + +P YPF+ P + F K+YHPN+ +G +CLD++ W+ +Y + +
Sbjct: 46 TPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKS 105
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
S L LL P P +P + A +YL +++
Sbjct: 106 ALIS-LQSLLCTPEPSNPQDAQVAQVYLQNYQQF 138
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 84.6 bits (200), Expect = 7e-18
Identities = 36/87 (41%), Positives = 55/87 (63%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ + +H P YPFK P + F ++YHPNI+ +G++CLD++ W+ +S
Sbjct: 43 SPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINS-NGSICLDILRDQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMY 444
+ S + LLT PNP DPL + A +Y
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHVY 127
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 80.6 bits (190), Expect = 1e-16
Identities = 37/94 (39%), Positives = 58/94 (61%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
T YEG +++ + P +YP+ P+I F + ++HPN+D +SG +CLD++ W+A+Y++
Sbjct: 71 TYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVD-MSGNICLDILKDKWSAVYNVQT 129
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I S L LL PN PLN AA ++ P EY
Sbjct: 130 ILLS-LQSLLGEPNNASPLNAQAAELWSKDPIEY 162
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 79.4 bits (187), Expect = 2e-16
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = +1
Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIF 369
Y+GG ++ R+ + D+YP P + +NK+YHPNID + G VCL+++ Q W + +L++I
Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNID-IEGNVCLNILRQDWNPVLNLNSIL 123
Query: 370 ESFLPQLLTYPNPIDPLNGDAAAMYLHK 453
L L PN DPLN +AAA LHK
Sbjct: 124 VG-LQFLFLSPNAEDPLNKEAAA-DLHK 149
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 77.8 bits (183), Expect = 8e-16
Identities = 32/89 (35%), Positives = 54/89 (60%)
Frame = +1
Query: 178 QVTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDL 357
Q + YEGG + + + LPD YP P++ F+ K+YHPN+D++ G +CL + + W+ +
Sbjct: 42 QQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKL-GRICLSTLKKDWSPALQI 100
Query: 358 SNIFESFLPQLLTYPNPIDPLNGDAAAMY 444
+ S + L+ PNP DPL+ D A ++
Sbjct: 101 RTVLLS-IQALMGAPNPDDPLDNDVAKIW 128
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 74.5 bits (175), Expect = 7e-15
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TPYEGG W + +H+ + YP PS+ F K+ HPNI +G VC+D++ W+ + L +
Sbjct: 47 TPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQS 106
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAM 441
+ + L Y + PLN DAA +
Sbjct: 107 ACLAIISLLSNY-DASSPLNVDAAKL 131
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 72.5 bits (170), Expect = 3e-14
Identities = 31/94 (32%), Positives = 55/94 (58%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TP+E G +++ + + YP K P + F++ ++HPN+ +G +CLD++ W+ YD++
Sbjct: 46 TPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNV-YANGELCLDILQNRWSPTYDVAA 104
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I S + LL PN P N +AA ++ +EY
Sbjct: 105 ILTS-IQSLLNDPNNASPANAEAAQLHRENKKEY 137
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 64.5 bits (150), Expect = 8e-12
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +1
Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI-NQAWTALYDLSNI 366
Y GG + + P YPF+ P+I F ++YHPN D G VCL ++ Q + L ++
Sbjct: 51 YAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDS-EGNVCLAILKQQVFKPSIKLRSV 109
Query: 367 FESFLPQLLTYPNPIDPLNGDAAAMY 444
E L QLL PNP DPL A Y
Sbjct: 110 LEQIL-QLLREPNPDDPLVASIAEQY 134
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 57.6 bits (133), Expect = 9e-10
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVIN--QAWTALYDL 357
T +EGG++++ + P+ YP + P F ++HPN+ SGTVCL ++N + W +
Sbjct: 51 TSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNV-YPSGTVCLSILNEEEGWKPAITI 109
Query: 358 SNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I + LL PN P +A M+ EY
Sbjct: 110 KQILLG-IQDLLDDPNIASPAQTEAYTMFKKDKVEY 144
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 54.4 bits (125), Expect = 8e-09
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
T YEGG + + P YP P + F +++HPN+ +G VC+ +++ Y +
Sbjct: 48 TLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNV-HPNGEVCISILHPPGDDKYGYED 106
Query: 364 IFESFLP------------QLLTYPNPIDPLNGDAAAMYLHKPEEY 465
E +LP +L+ PN P N DAA + P+E+
Sbjct: 107 AGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEF 152
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 51.2 bits (117), Expect = 8e-08
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI------------ 327
TP+EGG++ + P YP P++ F + +HPN+ + GTVC+ ++
Sbjct: 48 TPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYK-DGTVCISILHAPGDDPNMYES 106
Query: 328 -NQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
++ W+ + + I S + +L PN N DA M+ EEY
Sbjct: 107 SSERWSPVQSVEKILLSVM-SMLAEPNDESGANIDACKMWREDREEY 152
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 32.7 bits (71), Expect = 0.028
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSI 258
TPYEGG + + P YPFK P+I
Sbjct: 47 TPYEGGQYHGTLIFPPDYPFKPPAI 71
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 30.7 bits (66), Expect = 0.11
Identities = 14/74 (18%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVIN--QAWTALYDLSN 363
+E ++ +++H +YP P + F++++ P +D +G V I+ + W Y +
Sbjct: 53 HENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMET 112
Query: 364 IFESFLPQLLTYPN 405
+ ++ + N
Sbjct: 113 VLLDLKKEMASSSN 126
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 27.9 bits (59), Expect = 0.81
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 72 GNDAWHTDVIKLIESKHEVTILSGLNEFCV 161
G+D WH V K+ S +V ++S L E+ +
Sbjct: 283 GHDGWHCPVCKVQRSAKKVIMISKLPEYLI 312
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 25.8 bits (54), Expect = 3.3
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 181 VTPYEGGVWRVRVHLPDHYPFKS-PSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDL 357
V P+ + R+ L D + PSI F NKV N+ V+ TV ++ WT +
Sbjct: 667 VYPFSQFLGSYRIPLNDTVDVTTLPSIKFSNKVVKDNV--VNVTVTVEHPGLIWTVVSFD 724
Query: 358 SNIFESFLPQL 390
+++ LP++
Sbjct: 725 ADVLSWSLPEV 735
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1328
Score = 25.8 bits (54), Expect = 3.3
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 27 FIKE*YHEACRHRALGNDAWHTDVIKLIESKHEVTILSGLNEFCVKFFGPPGNAI 191
+IKE + +L DA +D+IKLIE K + + + K FG P A+
Sbjct: 1068 WIKEKGINSLTRVSLDEDALDSDIIKLIEEK--ASTIDSTYQVPKKVFGVPRYAL 1120
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 3.3
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 227 PIITPSSLRPSVS*IRSTTPT*MRCRGPCVLTSSTRRGLPFMT 355
P+ PSS PSVS RS+ P+ P +SS P T
Sbjct: 1238 PVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAPART 1280
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 25.8 bits (54), Expect = 3.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 75 NDAWHTDVIKLIESKHEVTILSGLNE 152
NDA+++D+ KLIE K V I + E
Sbjct: 221 NDAYNSDISKLIEHKTLVDIANARGE 246
>SPBC19G7.09 |ulp1||SUMO deconjugating enzyme
Ulp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 568
Score = 25.4 bits (53), Expect = 4.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 238 PFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQ 333
PF S + F N +PN D V+ LDV+++
Sbjct: 218 PFSSSPLHFTNSSPNPNSDIVTPDKQLDVVSE 249
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 25.0 bits (52), Expect = 5.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 271 KVYHPNIDEVSGTVCLDVINQAWTALYDLSNIFESFLPQLLTYPNPIDP 417
K++ P + E+S +CL + W+ + N F P L +P P
Sbjct: 1758 KMHIPGVIELSNHLCLTASSTEWSLIKHWCNFFTETGP-LCDFPRAYYP 1805
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 24.6 bits (51), Expect = 7.5
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 128 HFVL-AFDKFDDIGVPCVVSQRSVTTCFVILFLNKSQYRTRT 6
H++ A + D G+PC Q ++T C LN ++ + T
Sbjct: 1806 HYICQAVEVMLDSGLPCFKGQLTITHCLERFALNLNERQAST 1847
>SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 782
Score = 24.6 bits (51), Expect = 7.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 313 CLDVINQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAM 441
C D I A +Y L+ IF ++P T + LN AAA+
Sbjct: 700 CADAIGYALNLIYLLAAIFYPYMPS--TSTSIYKQLNAPAAAI 740
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 24.6 bits (51), Expect = 7.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 74 KRRMAHRCHQTYRKQARSDNPERP*RVLREILRTSR*RHTKVV 202
K R+ R + + SD+ E R+LRE++ SR H VV
Sbjct: 574 KNRIDGRFYAVKKLVLLSDDKENS-RILREVMTLSRLHHEHVV 615
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,983,900
Number of Sequences: 5004
Number of extensions: 41119
Number of successful extensions: 137
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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