BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1011 (466 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 153 1e-38 SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 85 5e-18 SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 85 7e-18 SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 81 1e-16 SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 79 2e-16 SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 78 8e-16 SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 75 7e-15 SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 73 3e-14 SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 64 8e-12 SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 58 9e-10 SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 54 8e-09 SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 51 8e-08 SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 33 0.028 SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 31 0.11 SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 28 0.81 SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 3.3 SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 26 3.3 SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 3.3 SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 26 3.3 SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharo... 25 4.3 SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 25 5.7 SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 7.5 SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces pomb... 25 7.5 SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 7.5 >SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosaccharomyces pombe|chr 2|||Manual Length = 184 Score = 153 bits (371), Expect = 1e-38 Identities = 62/94 (65%), Positives = 78/94 (82%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363 TPY GG+W+V V LP YP+KSPSIGF+N+++HPNIDE+SG+VCLDVINQ W+ ++D+ N Sbjct: 42 TPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMIN 101 Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465 IFE FLPQLL YPN DPLNG+AAA+ L +P Y Sbjct: 102 IFEVFLPQLLRYPNASDPLNGEAAALLLREPNTY 135 Score = 33.1 bits (72), Expect = 0.021 Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = +3 Query: 90 TDVIKLIESKHEVTILS-GLNEFCVKFFGP 176 TDV+KL+ S +EVT+++ + EF V+F GP Sbjct: 10 TDVMKLLMSDYEVTLVNDNMQEFYVRFHGP 39 >SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 217 Score = 85.0 bits (201), Expect = 5e-18 Identities = 34/94 (36%), Positives = 55/94 (58%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363 TPYEGG + V + +P YPF+ P + F K+YHPN+ +G +CLD++ W+ +Y + + Sbjct: 46 TPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKS 105 Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465 S L LL P P +P + A +YL +++ Sbjct: 106 ALIS-LQSLLCTPEPSNPQDAQVAQVYLQNYQQF 138 >SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccharomyces pombe|chr 2|||Manual Length = 147 Score = 84.6 bits (200), Expect = 7e-18 Identities = 36/87 (41%), Positives = 55/87 (63%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363 +PY GGV+ + +H P YPFK P + F ++YHPNI+ +G++CLD++ W+ +S Sbjct: 43 SPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINS-NGSICLDILRDQWSPALTISK 101 Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMY 444 + S + LLT PNP DPL + A +Y Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHVY 127 >SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C |Schizosaccharomyces pombe|chr 3|||Manual Length = 176 Score = 80.6 bits (190), Expect = 1e-16 Identities = 37/94 (39%), Positives = 58/94 (61%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363 T YEG +++ + P +YP+ P+I F + ++HPN+D +SG +CLD++ W+A+Y++ Sbjct: 71 TYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVD-MSGNICLDILKDKWSAVYNVQT 129 Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465 I S L LL PN PLN AA ++ P EY Sbjct: 130 ILLS-LQSLLGEPNNASPLNAQAAELWSKDPIEY 162 >SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosaccharomyces pombe|chr 3|||Manual Length = 177 Score = 79.4 bits (187), Expect = 2e-16 Identities = 38/88 (43%), Positives = 56/88 (63%) Frame = +1 Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIF 369 Y+GG ++ R+ + D+YP P + +NK+YHPNID + G VCL+++ Q W + +L++I Sbjct: 65 YKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNID-IEGNVCLNILRQDWNPVLNLNSIL 123 Query: 370 ESFLPQLLTYPNPIDPLNGDAAAMYLHK 453 L L PN DPLN +AAA LHK Sbjct: 124 VG-LQFLFLSPNAEDPLNKEAAA-DLHK 149 >SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Schizosaccharomyces pombe|chr 1|||Manual Length = 148 Score = 77.8 bits (183), Expect = 8e-16 Identities = 32/89 (35%), Positives = 54/89 (60%) Frame = +1 Query: 178 QVTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDL 357 Q + YEGG + + + LPD YP P++ F+ K+YHPN+D++ G +CL + + W+ + Sbjct: 42 QQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKL-GRICLSTLKKDWSPALQI 100 Query: 358 SNIFESFLPQLLTYPNPIDPLNGDAAAMY 444 + S + L+ PNP DPL+ D A ++ Sbjct: 101 RTVLLS-IQALMGAPNPDDPLDNDVAKIW 128 >SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosaccharomyces pombe|chr 2|||Manual Length = 160 Score = 74.5 bits (175), Expect = 7e-15 Identities = 32/86 (37%), Positives = 49/86 (56%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363 TPYEGG W + +H+ + YP PS+ F K+ HPNI +G VC+D++ W+ + L + Sbjct: 47 TPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQS 106 Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAM 441 + + L Y + PLN DAA + Sbjct: 107 ACLAIISLLSNY-DASSPLNVDAAKL 131 >SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual Length = 151 Score = 72.5 bits (170), Expect = 3e-14 Identities = 31/94 (32%), Positives = 55/94 (58%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363 TP+E G +++ + + YP K P + F++ ++HPN+ +G +CLD++ W+ YD++ Sbjct: 46 TPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNV-YANGELCLDILQNRWSPTYDVAA 104 Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465 I S + LL PN P N +AA ++ +EY Sbjct: 105 ILTS-IQSLLNDPNNASPANAEAAQLHRENKKEY 137 >SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosaccharomyces pombe|chr 1|||Manual Length = 155 Score = 64.5 bits (150), Expect = 8e-12 Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 1/86 (1%) Frame = +1 Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI-NQAWTALYDLSNI 366 Y GG + + P YPF+ P+I F ++YHPN D G VCL ++ Q + L ++ Sbjct: 51 YAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDS-EGNVCLAILKQQVFKPSIKLRSV 109 Query: 367 FESFLPQLLTYPNPIDPLNGDAAAMY 444 E L QLL PNP DPL A Y Sbjct: 110 LEQIL-QLLREPNPDDPLVASIAEQY 134 >SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosaccharomyces pombe|chr 1|||Manual Length = 157 Score = 57.6 bits (133), Expect = 9e-10 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 2/96 (2%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVIN--QAWTALYDL 357 T +EGG++++ + P+ YP + P F ++HPN+ SGTVCL ++N + W + Sbjct: 51 TSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNV-YPSGTVCLSILNEEEGWKPAITI 109 Query: 358 SNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465 I + LL PN P +A M+ EY Sbjct: 110 KQILLG-IQDLLDDPNIASPAQTEAYTMFKKDKVEY 144 >SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosaccharomyces pombe|chr 2|||Manual Length = 167 Score = 54.4 bits (125), Expect = 8e-09 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 12/106 (11%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363 T YEGG + + P YP P + F +++HPN+ +G VC+ +++ Y + Sbjct: 48 TLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNV-HPNGEVCISILHPPGDDKYGYED 106 Query: 364 IFESFLP------------QLLTYPNPIDPLNGDAAAMYLHKPEEY 465 E +LP +L+ PN P N DAA + P+E+ Sbjct: 107 AGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEF 152 >SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizosaccharomyces pombe|chr 2|||Manual Length = 166 Score = 51.2 bits (117), Expect = 8e-08 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI------------ 327 TP+EGG++ + P YP P++ F + +HPN+ + GTVC+ ++ Sbjct: 48 TPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYK-DGTVCISILHAPGDDPNMYES 106 Query: 328 -NQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465 ++ W+ + + I S + +L PN N DA M+ EEY Sbjct: 107 SSERWSPVQSVEKILLSVM-SMLAEPNDESGANIDACKMWREDREEY 152 >SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosaccharomyces pombe|chr 1|||Manual Length = 227 Score = 32.7 bits (71), Expect = 0.028 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSI 258 TPYEGG + + P YPFK P+I Sbjct: 47 TPYEGGQYHGTLIFPPDYPFKPPAI 71 >SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizosaccharomyces pombe|chr 3|||Manual Length = 139 Score = 30.7 bits (66), Expect = 0.11 Identities = 14/74 (18%), Positives = 35/74 (47%), Gaps = 2/74 (2%) Frame = +1 Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVIN--QAWTALYDLSN 363 +E ++ +++H +YP P + F++++ P +D +G V I+ + W Y + Sbjct: 53 HENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMET 112 Query: 364 IFESFLPQLLTYPN 405 + ++ + N Sbjct: 113 VLLDLKKEMASSSN 126 >SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizosaccharomyces pombe|chr 2|||Manual Length = 438 Score = 27.9 bits (59), Expect = 0.81 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 Query: 72 GNDAWHTDVIKLIESKHEVTILSGLNEFCV 161 G+D WH V K+ S +V ++S L E+ + Sbjct: 283 GHDGWHCPVCKVQRSAKKVIMISKLPEYLI 312 >SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|||Manual Length = 822 Score = 25.8 bits (54), Expect = 3.3 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 181 VTPYEGGVWRVRVHLPDHYPFKS-PSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDL 357 V P+ + R+ L D + PSI F NKV N+ V+ TV ++ WT + Sbjct: 667 VYPFSQFLGSYRIPLNDTVDVTTLPSIKFSNKVVKDNV--VNVTVTVEHPGLIWTVVSFD 724 Query: 358 SNIFESFLPQL 390 +++ LP++ Sbjct: 725 ADVLSWSLPEV 735 >SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1328 Score = 25.8 bits (54), Expect = 3.3 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +3 Query: 27 FIKE*YHEACRHRALGNDAWHTDVIKLIESKHEVTILSGLNEFCVKFFGPPGNAI 191 +IKE + +L DA +D+IKLIE K + + + K FG P A+ Sbjct: 1068 WIKEKGINSLTRVSLDEDALDSDIIKLIEEK--ASTIDSTYQVPKKVFGVPRYAL 1120 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 25.8 bits (54), Expect = 3.3 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +2 Query: 227 PIITPSSLRPSVS*IRSTTPT*MRCRGPCVLTSSTRRGLPFMT 355 P+ PSS PSVS RS+ P+ P +SS P T Sbjct: 1238 PVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAPART 1280 >SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism |Schizosaccharomyces pombe|chr 2|||Manual Length = 325 Score = 25.8 bits (54), Expect = 3.3 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 75 NDAWHTDVIKLIESKHEVTILSGLNE 152 NDA+++D+ KLIE K V I + E Sbjct: 221 NDAYNSDISKLIEHKTLVDIANARGE 246 >SPBC19G7.09 |ulp1||SUMO deconjugating enzyme Ulp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 568 Score = 25.4 bits (53), Expect = 4.3 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 238 PFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQ 333 PF S + F N +PN D V+ LDV+++ Sbjct: 218 PFSSSPLHFTNSSPNPNSDIVTPDKQLDVVSE 249 >SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1958 Score = 25.0 bits (52), Expect = 5.7 Identities = 13/49 (26%), Positives = 22/49 (44%) Frame = +1 Query: 271 KVYHPNIDEVSGTVCLDVINQAWTALYDLSNIFESFLPQLLTYPNPIDP 417 K++ P + E+S +CL + W+ + N F P L +P P Sbjct: 1758 KMHIPGVIELSNHLCLTASSTEWSLIKHWCNFFTETGP-LCDFPRAYYP 1805 >SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 1877 Score = 24.6 bits (51), Expect = 7.5 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -3 Query: 128 HFVL-AFDKFDDIGVPCVVSQRSVTTCFVILFLNKSQYRTRT 6 H++ A + D G+PC Q ++T C LN ++ + T Sbjct: 1806 HYICQAVEVMLDSGLPCFKGQLTITHCLERFALNLNERQAST 1847 >SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces pombe|chr 2|||Manual Length = 782 Score = 24.6 bits (51), Expect = 7.5 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +1 Query: 313 CLDVINQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAM 441 C D I A +Y L+ IF ++P T + LN AAA+ Sbjct: 700 CADAIGYALNLIYLLAAIFYPYMPS--TSTSIYKQLNAPAAAI 740 >SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1576 Score = 24.6 bits (51), Expect = 7.5 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +2 Query: 74 KRRMAHRCHQTYRKQARSDNPERP*RVLREILRTSR*RHTKVV 202 K R+ R + + SD+ E R+LRE++ SR H VV Sbjct: 574 KNRIDGRFYAVKKLVLLSDDKENS-RILREVMTLSRLHHEHVV 615 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,983,900 Number of Sequences: 5004 Number of extensions: 41119 Number of successful extensions: 137 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 126 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 176367270 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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