Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1011
         (466 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.43 
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    25   0.99 
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   6.9  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   9.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   9.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.6 bits (56), Expect = 0.43
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 229  DHYPFKSPSIGFMNKVYHPNIDEVSGTVC 315
            DH  F   ++ F   VY P+  EV  T+C
Sbjct: 1467 DHVRFSPLNLNFRANVYTPDTAEVRATLC 1495


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -1

Query: 373 IQIYSISHKGQSTPG**RQDTRSPTPHLCWGGRPYS 266
           I +Y+I H   + P   R D     P  C   +PYS
Sbjct: 398 IPVYAIHHDADNYPDPERYDPDRFAPEACESRKPYS 433


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 280 GRPYS*NRWTET*RGNDREGARVLSTHHLRMALPGGPKNFTQNSLRP 140
           G+  S + W  T    D  G  VLS   L+++LP   +     + RP
Sbjct: 282 GKKLSVSGWGRTDIFKDNLGPDVLSPIKLKLSLPYVEREKCSKTFRP 328


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 311 CVLTSSTRRGLPFMTYRI 364
           CV+ SS RRG P +  R+
Sbjct: 706 CVMISSLRRGHPEIPIRV 723


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 188 GVTWRSEEFHAELVKAAQD 132
           G  WR+  F AEL   A D
Sbjct: 233 GTRWRTRHFDAELFGVALD 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,293
Number of Sequences: 2352
Number of extensions: 11397
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)