Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1011
(466 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 153 4e-38
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 152 1e-37
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 149 1e-36
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 91 4e-19
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 90 8e-19
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 90 8e-19
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 89 1e-18
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 89 1e-18
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 89 1e-18
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 89 1e-18
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 89 1e-18
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 89 2e-18
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 87 7e-18
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 87 7e-18
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 86 1e-17
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 85 2e-17
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 85 2e-17
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 84 5e-17
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 84 5e-17
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 84 5e-17
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 84 5e-17
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 83 7e-17
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 83 7e-17
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 83 1e-16
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 81 3e-16
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 75 2e-14
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 74 4e-14
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 73 1e-13
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 72 2e-13
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 71 3e-13
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 71 5e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 69 2e-12
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 64 3e-11
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 63 1e-10
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 63 1e-10
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 62 1e-10
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 51 3e-07
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 51 4e-07
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 50 6e-07
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 50 6e-07
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 50 8e-07
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 50 1e-06
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 49 1e-06
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 39 0.001
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 38 0.003
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 36 0.013
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 32 0.17
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 32 0.22
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 32 0.22
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 30 0.67
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 29 1.2
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 29 2.0
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 29 2.0
At1g70720.1 68414.m08152 invertase/pectin methylesterase inhibit... 28 2.7
At5g05650.1 68418.m00618 hypothetical protein 28 3.6
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 28 3.6
At2g02060.1 68415.m00141 calcium-dependent protein kinase-relate... 28 3.6
At2g40050.1 68415.m04921 DC1 domain-containing protein contains ... 27 4.7
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 27 4.7
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 27 6.2
At4g00300.1 68417.m00037 fringe-related protein + weak similarit... 27 8.3
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 27 8.3
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 153 bits (372), Expect = 4e-38
Identities = 61/92 (66%), Positives = 78/92 (84%)
Frame = +1
Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIF 369
YEGGVW++RV LPD YP+KSPS+GF+ K+YHPN+DE+SG+VCLDVINQ W+ ++DL N+F
Sbjct: 44 YEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVF 103
Query: 370 ESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
E+FLPQLL YPNP DPLNG+AAA+ + Y
Sbjct: 104 ETFLPQLLLYPNPSDPLNGEAAALMMRDRPTY 135
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 152 bits (369), Expect = 1e-37
Identities = 60/92 (65%), Positives = 78/92 (84%)
Frame = +1
Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIF 369
Y+GGVW++RV LPD YP+KSPS+GF+ K+YHPN+DE+SG+VCLDVINQ W+ ++DL N+F
Sbjct: 44 YQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVF 103
Query: 370 ESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
E+FLPQLL YPNP DPLNG+AAA+ + Y
Sbjct: 104 ETFLPQLLLYPNPSDPLNGEAAALMMRDRPAY 135
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 149 bits (360), Expect = 1e-36
Identities = 58/92 (63%), Positives = 76/92 (82%)
Frame = +1
Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIF 369
Y+GGVW+++V LP+ YP+KSPS+GF+NK+YHPN+DE SG VCLDVINQ W+ ++DL N+F
Sbjct: 44 YQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVF 103
Query: 370 ESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
ESFLPQLL YPNP DP NG+AA++ + Y
Sbjct: 104 ESFLPQLLLYPNPSDPFNGEAASLLMRDRAAY 135
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 90.6 bits (215), Expect = 4e-19
Identities = 41/94 (43%), Positives = 58/94 (61%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KVYHPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LLT PNP DPL + A MY +Y
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRSKY 134
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 89.8 bits (213), Expect = 8e-19
Identities = 40/94 (42%), Positives = 58/94 (61%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G++CLD++ + W+ +S
Sbjct: 73 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISK 131
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LLT PNP DPL + A MY +Y
Sbjct: 132 VLLS-ICSLLTDPNPDDPLVPEIAHMYKTDKNKY 164
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 89.8 bits (213), Expect = 8e-19
Identities = 40/94 (42%), Positives = 58/94 (61%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LLT PNP DPL + A MY +Y
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHMYKTDKNKY 134
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/94 (42%), Positives = 58/94 (61%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LLT PNP DPL + A MY +Y
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHMYKTDKNKY 134
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/94 (42%), Positives = 58/94 (61%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LLT PNP DPL + A MY +Y
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHMYKTDKNKY 134
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 89.0 bits (211), Expect = 1e-18
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G++CLD++ + W+ +S
Sbjct: 44 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISK 102
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMY 444
+ S + LLT PNP DPL + A MY
Sbjct: 103 VLLS-ICSLLTDPNPDDPLVPEIAHMY 128
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 89.0 bits (211), Expect = 1e-18
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMY 444
+ S + LLT PNP DPL + A MY
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHMY 127
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 89.0 bits (211), Expect = 1e-18
Identities = 39/87 (44%), Positives = 56/87 (64%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMY 444
+ S + LLT PNP DPL + A MY
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHMY 127
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPN++ +G++CLD++ + W+ +S
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMY 444
+ S + LLT PNP DPL + A MY
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHMY 127
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+P+ GGV+ V +H P YPFK P + F KVYHPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINS-NGSICLDILKEQWSPALTVSK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMY 444
+ S + LLT PNP DPL + A +Y
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHIY 127
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 86.6 bits (205), Expect = 7e-18
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+P+ GGV+ V +H P YPFK P + F KVYHPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINS-NGSICLDILKEQWSPALTVSK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMY 444
+ S + LLT PNP DPL + A +Y
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHIY 127
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 85.8 bits (203), Expect = 1e-17
Identities = 39/94 (41%), Positives = 56/94 (59%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G +CLD++ W+ +S
Sbjct: 43 SPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINS-NGNICLDILKDQWSPALTISK 101
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LLT PNP DPL + A +Y +Y
Sbjct: 102 VLLS-ICSLLTDPNPDDPLVPEIAHIYKTDKTKY 134
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/94 (37%), Positives = 59/94 (62%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TP++GG +++ + + YP K P++ F+++++HPNI G++CLD++ W+ +YD++
Sbjct: 46 TPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAA 104
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I S + LL PNP P N +AA MY EY
Sbjct: 105 ILTS-IQSLLCDPNPNSPANSEAARMYSESKREY 137
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 85.0 bits (201), Expect = 2e-17
Identities = 35/94 (37%), Positives = 59/94 (62%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TP++GG +++ + + YP K P++ F+++++HPNI G++CLD++ W+ +YD++
Sbjct: 46 TPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAA 104
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I S + LL PNP P N +AA MY EY
Sbjct: 105 ILTS-IQSLLCDPNPNSPANSEAARMYSESKREY 137
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 83.8 bits (198), Expect = 5e-17
Identities = 33/94 (35%), Positives = 59/94 (62%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TP++GG +++ +H + YP K P + F+++++HPNI G++CLD++ W+ +YD++
Sbjct: 46 TPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAA 104
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LL PNP P N +AA ++ EY
Sbjct: 105 VLTS-IQSLLCDPNPDSPANAEAARLFSENKREY 137
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 83.8 bits (198), Expect = 5e-17
Identities = 34/84 (40%), Positives = 56/84 (66%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PYEGGV+++ + LP+ YP +P + F+ K+YHPNID++ G +CLD++ W+ +
Sbjct: 47 SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRT 105
Query: 364 IFESFLPQLLTYPNPIDPLNGDAA 435
+ S + LL+ PNP DPL+ + A
Sbjct: 106 VLLS-IQALLSAPNPDDPLSENIA 128
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 83.8 bits (198), Expect = 5e-17
Identities = 34/84 (40%), Positives = 56/84 (66%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PYEGGV+++ + LP+ YP +P + F+ K+YHPNID++ G +CLD++ W+ +
Sbjct: 47 SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRT 105
Query: 364 IFESFLPQLLTYPNPIDPLNGDAA 435
+ S + LL+ PNP DPL+ + A
Sbjct: 106 VLLS-IQALLSAPNPDDPLSENIA 128
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 83.8 bits (198), Expect = 5e-17
Identities = 34/84 (40%), Positives = 56/84 (66%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PYEGGV+++ + LP+ YP +P + F+ K+YHPNID++ G +CLD++ W+ +
Sbjct: 14 SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRT 72
Query: 364 IFESFLPQLLTYPNPIDPLNGDAA 435
+ S + LL+ PNP DPL+ + A
Sbjct: 73 VLLS-IQALLSAPNPDDPLSENIA 95
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 83.4 bits (197), Expect = 7e-17
Identities = 39/94 (41%), Positives = 54/94 (57%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V + YPFK P + F KVYHPNID G++CLD++ + W+ S
Sbjct: 44 SPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDS-KGSICLDILKEQWSPAPTTSK 102
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LLT PNP DPL + A +Y +Y
Sbjct: 103 VLLS-ICSLLTDPNPNDPLVPEIAHLYKVDKSKY 135
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 83.4 bits (197), Expect = 7e-17
Identities = 34/94 (36%), Positives = 59/94 (62%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TP++GG +++ + + YP K P++ F+++++HPNI G++CLD++ W+ +YD++
Sbjct: 46 TPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAA 104
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I S + LL PNP P N +AA M+ EY
Sbjct: 105 ILTS-IQSLLCDPNPNSPANSEAARMFSESKREY 137
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 82.6 bits (195), Expect = 1e-16
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TPYEGG +++ + +PD YPF+ P + F KV+HPNI SG +CLD++ W+ L
Sbjct: 45 TPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKT 104
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYL 447
S + LL+ P P DP + A Y+
Sbjct: 105 ALVS-IQALLSAPEPKDPQDAVVAEQYM 131
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 81.4 bits (192), Expect = 3e-16
Identities = 30/83 (36%), Positives = 54/83 (65%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TPYEGGV+++ +P+ YP + P + F+ K++HPN+ +G +CLD++ AW+ + L +
Sbjct: 47 TPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQS 106
Query: 364 IFESFLPQLLTYPNPIDPLNGDA 432
+ + + L+ +P P PLN D+
Sbjct: 107 VCRAII-ALMAHPEPDSPLNCDS 128
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 74.9 bits (176), Expect = 2e-14
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TPYEGG++ + + P YPFK P F +YHPNI++ G++C++++ WT +
Sbjct: 49 TPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNIND-EGSICMNILKDKWTPALMVEK 107
Query: 364 IFESFLPQLLTYPNPIDPL 420
+ S L LL PNP DPL
Sbjct: 108 VLLSIL-LLLEKPNPDDPL 125
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 74.1 bits (174), Expect = 4e-14
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
T +EG +R+ + + YPFKSP + F +HPN+D + G +CLD++ W++ YD+
Sbjct: 78 TVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVD-LYGNICLDILQDKWSSAYDVRT 136
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I S + LL PN PLN AA ++ ++ EEY
Sbjct: 137 ILLS-IQSLLGEPNISSPLNNQAAQLWSNQ-EEY 168
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 72.9 bits (171), Expect = 1e-13
Identities = 36/94 (38%), Positives = 55/94 (58%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
T +EG +R+ + + YPFK P + F +HPN+D V G +CLD++ W++ YD+
Sbjct: 77 TVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVD-VYGNICLDILQDKWSSAYDVRT 135
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I S + LL PN PLN AA ++ ++ EEY
Sbjct: 136 ILLS-IQSLLGEPNISSPLNTQAAQLWSNQ-EEY 167
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 71.7 bits (168), Expect = 2e-13
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PY GGV+ V +H P YPFK P + F KV+HPNI+ +G++CLD++ + W+ +S
Sbjct: 43 SPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISK 101
Query: 364 I 366
+
Sbjct: 102 V 102
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 71.3 bits (167), Expect = 3e-13
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVIN----QAWTALY 351
T Y G++ +++ +P+ YPF+ P + F +YHPNID SG +CLD++N AW
Sbjct: 57 TVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDN-SGRICLDILNLPPKGAWQPSL 115
Query: 352 DLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
++S + S + LL+ PNP D L + + Y + + +
Sbjct: 116 NISTVLTS-MRLLLSEPNPDDGLMCEVSREYKYNRQTF 152
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 70.5 bits (165), Expect = 5e-13
Identities = 24/66 (36%), Positives = 44/66 (66%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
+PYEGGV+++ + LP+ YP +P + F+ K+YHPNID++ G +CLD++ W+ +
Sbjct: 47 SPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL-GRICLDILKDKWSPALQIRT 105
Query: 364 IFESFL 381
+ ++
Sbjct: 106 VLLRYM 111
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 68.5 bits (160), Expect = 2e-12
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +1
Query: 187 PYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNI 366
PYE GV+ V VH+P YP++ P I F K++HPNI E+ G + +D++ W++ ++ +
Sbjct: 73 PYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEI-GEIFVDILGSRWSSALTINLV 131
Query: 367 FESFLPQLLTYPNPIDPL--NGDAAAMYLHKPEEY 465
S L NP++PL + AA +Y + Y
Sbjct: 132 LLSICSIL---SNPVEPLLVSNHAARLYQKDRKAY 163
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 64.5 bits (150), Expect = 3e-11
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQ--AWTALYDL 357
T +EGG + + +H + YP K P F +HPN+ SGTVCL ++N+ W +
Sbjct: 52 TDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDYGWRPAITV 110
Query: 358 SNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
I + LL PNP DP D ++ P EY
Sbjct: 111 KQILVG-IQDLLDTPNPADPAQTDGYHLFCQDPVEY 145
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/94 (27%), Positives = 52/94 (55%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TPYEGG++ + + P YPFK P + F ++YH N+D +G + ++++ +W+ ++
Sbjct: 78 TPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVD-TAGDLSVNILRDSWSPALTITK 136
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ ++ + + P P P A +YL E++
Sbjct: 137 VLQA-IRSIFLKPEPYSPALPVIARLYLTDREKH 169
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 62.9 bits (146), Expect = 1e-10
Identities = 31/92 (33%), Positives = 51/92 (55%)
Frame = +1
Query: 190 YEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIF 369
Y G + + + YP ++P + KVYHPNID + G VCL+++ + W + +++ +
Sbjct: 74 YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNID-LEGNVCLNILREDWKPVLNINTVI 132
Query: 370 ESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
L L T PN DPLN +AAA+ P+ +
Sbjct: 133 YG-LFHLFTEPNYEDPLNHEAAAVLRDNPKTF 163
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSN 363
TPYE G++R+++ L +P P FM K++HPN+ +G +C++ + + W L +
Sbjct: 52 TPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVAS-NGEICVNTLKKDWNPSLGLRH 110
Query: 364 IFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
+ S + LL P P LN A M L +EY
Sbjct: 111 VL-SVVRCLLIEPFPESALNEQAGKMLLENYDEY 143
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 51.2 bits (117), Expect = 3e-07
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKV-YHPNIDEVSGTVCLDVINQAWTALYDLS 360
T Y ++++V P+HYP +SP + F++ HP+I +G +CLD++ +W+ +S
Sbjct: 56 TLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYS-NGHICLDILYDSWSPAMTVS 114
Query: 361 NIFESFLPQLLTYPNPIDPLNGD 429
+I S L L + P + D
Sbjct: 115 SICISILSMLSSSTEKQRPTDND 137
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 50.8 bits (116), Expect = 4e-07
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI------------ 327
T YEGG + + P +YP P++ F + ++HPN+ G VC+ ++
Sbjct: 47 TLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNV-YPDGRVCISILHPPGDDPSGYEL 105
Query: 328 -NQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
++ WT ++ + +I S + +L+ PN P N +AA + K +E+
Sbjct: 106 ASERWTPVHTVESIMLSII-SMLSGPNDESPANVEAAKEWREKRDEF 151
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 50.4 bits (115), Expect = 6e-07
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI------------ 327
T YEGG + + P +YP P++ F + ++HPN+ G VC+ ++
Sbjct: 79 TLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYS-DGRVCISILHPPGDDPSGYEL 137
Query: 328 -NQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
++ WT ++ + +I S + +L+ PN P N +AA + K +E+
Sbjct: 138 ASERWTPVHTVESIMLSII-SMLSGPNDESPANVEAAKEWRDKRDEF 183
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 50.4 bits (115), Expect = 6e-07
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKV-YHPNIDEVSGTVCLDVINQAWTALYDLS 360
T Y ++++V P+HYP ++P + F++ HP+I +G +CLD++ +W+ ++
Sbjct: 56 TLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYS-NGHICLDILYDSWSPAMTVN 114
Query: 361 NIFESFLPQLLTYPNPIDPLNGD 429
++ S L L + P P + D
Sbjct: 115 SVCISILSMLSSSPAKQRPADND 137
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 50.0 bits (114), Expect = 8e-07
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKV-YHPNIDEVSGTVCLDVINQAWTALYDLS 360
T Y + ++V P HYP ++P + F+ HP+I +G +CLD++ +W+ +S
Sbjct: 56 TLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYS-NGHICLDILYDSWSPAMTVS 114
Query: 361 NIFESFLPQLLTYPNPIDPLNGD 429
++ S L L + P P + D
Sbjct: 115 SVCISILSMLSSSPEKQRPTDND 137
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI------------ 327
T YEGG + + P++YP P++ F ++++HPN+ G VC+ ++
Sbjct: 48 TLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYS-DGKVCISILHPPGDDPHGYEL 106
Query: 328 -NQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEY 465
++ WT ++ + +I S + +L+ PN P N +AA + E+
Sbjct: 107 ASERWTPVHTVESIVLSII-SMLSGPNDESPANVEAAKEWRDNRAEF 152
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 49.2 bits (112), Expect = 1e-06
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKV-YHPNIDEVSGTVCLDVINQAWTALYDLS 360
T Y ++++V P+HYP ++P + F + HP+I +G +CLDV+ +W+ LS
Sbjct: 56 TLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYS-NGHICLDVLYDSWSPAMRLS 114
Query: 361 NIFESFLPQL 390
+I S L L
Sbjct: 115 SICLSILSML 124
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPN-IDEVSGTVCLDVIN---QAWTALY 351
T +EGG++ R+ LP YPFK PS FM + PN E + +CL + N + W +
Sbjct: 53 TEFEGGIYHGRIQLPADYPFKPPS--FM--LLTPNGRFETNTKICLSISNYHPEHWQPSW 108
Query: 352 DLSNIFESFLPQLLTYPN 405
+ + + + T PN
Sbjct: 109 SVRTALVALIAFMPTSPN 126
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVY--HPNIDEVSGTVCLDVINQAWT 342
TPY+ G++ HLP YP PS + + + +PN+ E G VCL ++N WT
Sbjct: 892 TPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYE-EGKVCLSLLN-TWT 944
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 35.9 bits (79), Expect = 0.013
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMN--KVYHPNIDEVSGTVCLDVINQAWTALYDL 357
TPY G++ + LP YP + P + + + +PN+ E SG VCL ++N + ++
Sbjct: 704 TPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYE-SGRVCLSLLNTWSGSGTEV 762
Query: 358 SNIFESFLPQLL 393
N S + QLL
Sbjct: 763 WNAGSSSILQLL 774
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVS-GTVCL---DVINQAWTALY 351
TP+ GG + ++ P YP+K P I PN V+ +CL D ++W ++
Sbjct: 47 TPFAGGFYYGKIKFPPEYPYKPPGITMTT----PNGRFVTQKKICLSMSDFHPESWNPMW 102
Query: 352 DLSNIFESFL 381
+S+I L
Sbjct: 103 SVSSILTGLL 112
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 31.9 bits (69), Expect = 0.22
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMN--KVYHPNIDEVSGTVCLDVINQAWT 342
TPY G++ + PD YP P + + + +PN+ + G VCL +I+ WT
Sbjct: 647 TPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYK-CGKVCLSLIS-TWT 699
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMN--KVYHPNIDEVSGTVCLDVI 327
TPY G++ + PD YP P++ + + +PN+ G VCL ++
Sbjct: 313 TPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYN-CGKVCLSLL 361
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 31.9 bits (69), Expect = 0.22
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVS-GTVCL---DVINQAWTALY 351
TP+ GG + ++ P YP+K P I PN ++ +CL D ++W ++
Sbjct: 47 TPFAGGFYYGKIKFPPEYPYKPPGITMTT----PNGRFMTQKKICLSMSDFHPESWNPMW 102
Query: 352 DLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHK 453
+S+I L LL++ P G + K
Sbjct: 103 SVSSI----LTGLLSFMMDTSPTTGSVNTTVIEK 132
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 30.3 bits (65), Expect = 0.67
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTV--CLDVINQAWTALYDL 357
T YEG ++++++ YP P++ F ++ ++ +G V L + W Y +
Sbjct: 57 TAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTM 116
Query: 358 SNIFESFLPQLLTYPN 405
+I +++T N
Sbjct: 117 EDILVKLKKEMMTSHN 132
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +1
Query: 181 VTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTV 312
VT +EG ++++++ YP K P++ F ++V ++ +G V
Sbjct: 59 VTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVV 102
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 QVTPYEGGVWRVRVHLPDHYPFKSPSIGFMN--KVYHPNIDEVSGTVCLDVINQAWT 342
Q TPY G++ + PD YP P + + + +PN+ G VCL ++ W+
Sbjct: 372 QGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYN-CGKVCLSLLG-TWS 426
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +1
Query: 181 VTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTV 312
VT +EG ++++++ YP K P++ F +++ ++ +G V
Sbjct: 58 VTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVV 101
>At1g70720.1 68414.m08152 invertase/pectin methylesterase inhibitor
family protein low similarity to pectinesterase from
Lycopersicon esculentum SP|Q43143, Arabidopsis thaliana
SP|Q42534, Phaseolus vulgaris SP|Q43111; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 200
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 364 IFESFLPQLLTYPNPIDPLNG 426
+F +FLPQ+LT P+ P NG
Sbjct: 13 LFSTFLPQILTVDPPLLPSNG 33
>At5g05650.1 68418.m00618 hypothetical protein
Length = 125
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 199 GVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVI 327
GVW ++ PD Y SI + V P E+ G VCL +I
Sbjct: 59 GVWSGCLYDPDIYTDGKISIQGVGGVLFPREAEIGGCVCLCLI 101
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 27.9 bits (59), Expect = 3.6
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTV 312
T +EG ++++++ YP K P++ F ++V ++ +G V
Sbjct: 59 TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVV 101
>At2g02060.1 68415.m00141 calcium-dependent protein kinase-related /
CDPK-related contains TIGRFAM TIGR01557: myb-like
DNA-binding domain, SHAQKYF class; contains Pfam
PF00249: Myb-like DNA-binding domain; similar to CDPK
substrate protein 1; CSP1 (GI:6942190) [Mesembryanthemum
crystallinum].
Length = 626
Score = 27.9 bits (59), Expect = 3.6
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Frame = +1
Query: 238 PFKSPSIGFMNKVYHPNIDEV-------SGTVCLDVINQAWTALYDLSNI-FESF 378
P SPS+ ++ P ++EV GTV L +N+AW A + ++ FESF
Sbjct: 310 PSPSPSLS-PEEIEEPKLEEVLRRAATKDGTVILTTLNEAWAAPGSVIDLFFESF 363
>At2g40050.1 68415.m04921 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 609
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 351 IKGSPRLVDDVKTHGPRHLIYVGVVDLIHETDGRRLE 241
++G P ++D + GP +I GV+ H RLE
Sbjct: 307 LEGIPEIIDITENDGPFEVISEGVILYFHHNHHLRLE 343
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTV 312
T YEG ++++++ YP P++ F +++ ++ +G V
Sbjct: 57 TAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVV 99
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 27.1 bits (57), Expect = 6.2
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = +1
Query: 184 TPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTV 312
T +EG ++++++ YP K P++ F +++ ++ +G V
Sbjct: 58 TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVV 100
>At4g00300.1 68417.m00037 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 785
Score = 26.6 bits (56), Expect = 8.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -1
Query: 220 ARVLSTHHLRMALPGGPKNFTQNSLRPLRIVTSCLLSISLMTSVCH 83
A ++S HHL + P PK N+L+ L I + + SVC+
Sbjct: 301 APIVSIHHLDVVDPIFPKTNRVNALKKLMIPAKLDSASLVQQSVCY 346
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 318 KTHGPRHLIYVGVVDLIHETDGRRLEGVMIGKV 220
+ H P +I +GV D H DG + IGKV
Sbjct: 678 EVHDPCTVITIGVFDNSHVNDGGDFKDQRIGKV 710
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,477,745
Number of Sequences: 28952
Number of extensions: 222273
Number of successful extensions: 680
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 782033640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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