Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1010
         (474 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069241-1|AAL39386.1|  567|Drosophila melanogaster GM01569p pro...    28   5.6  
AE014297-1734|AAN13586.1|  567|Drosophila melanogaster CG9374-PI...    28   5.6  
AE014297-1733|AAN13585.1|  567|Drosophila melanogaster CG9374-PH...    28   5.6  
AE014297-1732|AAN13584.1|  567|Drosophila melanogaster CG9374-PF...    28   5.6  
AE014297-1731|AAN13583.1|  567|Drosophila melanogaster CG9374-PE...    28   5.6  
AE014297-1730|AAN13582.1|  567|Drosophila melanogaster CG9374-PD...    28   5.6  
AE014297-1729|AAN13581.1|  567|Drosophila melanogaster CG9374-PC...    28   5.6  
AE014297-1728|AAN13580.1|  567|Drosophila melanogaster CG9374-PB...    28   5.6  
AE014297-1727|AAF54972.2|  567|Drosophila melanogaster CG9374-PA...    28   5.6  

>AY069241-1|AAL39386.1|  567|Drosophila melanogaster GM01569p
           protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


>AE014297-1734|AAN13586.1|  567|Drosophila melanogaster CG9374-PI,
           isoform I protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


>AE014297-1733|AAN13585.1|  567|Drosophila melanogaster CG9374-PH,
           isoform H protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


>AE014297-1732|AAN13584.1|  567|Drosophila melanogaster CG9374-PF,
           isoform F protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


>AE014297-1731|AAN13583.1|  567|Drosophila melanogaster CG9374-PE,
           isoform E protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


>AE014297-1730|AAN13582.1|  567|Drosophila melanogaster CG9374-PD,
           isoform D protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


>AE014297-1729|AAN13581.1|  567|Drosophila melanogaster CG9374-PC,
           isoform C protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


>AE014297-1728|AAN13580.1|  567|Drosophila melanogaster CG9374-PB,
           isoform B protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


>AE014297-1727|AAF54972.2|  567|Drosophila melanogaster CG9374-PA,
           isoform A protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -1

Query: 189 KNSALVSCFLDIFEFGPQDLSVYFLIHNINE 97
           +NS ++  +L+ + +G Q+  VYF  H++N+
Sbjct: 457 RNSTVIP-YLEAYHYGTQEEDVYFTEHDVNQ 486


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,612,807
Number of Sequences: 53049
Number of extensions: 323855
Number of successful extensions: 630
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)