Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1009
(498 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 169 3e-41
UniRef50_Q9BPP9 Cluster: Gag-like protein; n=2; Bombyx mori|Rep:... 118 6e-26
UniRef50_Q5KTL1 Cluster: Putative uncharacterized protein; n=1; ... 72 8e-12
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 64 1e-09
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 61 1e-08
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 46 5e-04
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 45 8e-04
UniRef50_Q3LG55 Cluster: Reverse transcriptase; n=4; Bilateria|R... 41 0.018
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 40 0.031
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 38 0.095
UniRef50_UPI0000E4A868 Cluster: PREDICTED: similar to glutamine-... 38 0.17
UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like p... 37 0.29
UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1... 36 0.51
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 36 0.51
UniRef50_A6S863 Cluster: Putative uncharacterized protein; n=2; ... 35 1.2
UniRef50_A7RML8 Cluster: Predicted protein; n=2; Nematostella ve... 34 1.5
UniRef50_A7SP32 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.0
UniRef50_UPI0000E46BAD Cluster: PREDICTED: similar to ReO_6; n=3... 33 2.7
UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c... 32 6.2
UniRef50_Q60QT4 Cluster: Putative uncharacterized protein CBG216... 32 6.2
UniRef50_A5C6D8 Cluster: Putative uncharacterized protein; n=5; ... 32 8.2
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 169 bits (411), Expect = 3e-41
Identities = 78/86 (90%), Positives = 81/86 (94%)
Frame = +2
Query: 239 MAYISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY 418
MAY SR+KPLSVTIGFFNAYGLANQRDQV DFLRDHQIDIFLVQETLLKPARRDPKIANY
Sbjct: 1 MAYKSRLKPLSVTIGFFNAYGLANQRDQVCDFLRDHQIDIFLVQETLLKPARRDPKIANY 60
Query: 419 NMXRNDRLSARGGGTAIYYRRALHCV 496
NM RNDR +ARGGGT IYYRRALHC+
Sbjct: 61 NMVRNDRRTARGGGTVIYYRRALHCI 86
>UniRef50_Q9BPP9 Cluster: Gag-like protein; n=2; Bombyx mori|Rep:
Gag-like protein - Bombyx mori (Silk moth)
Length = 553
Score = 118 bits (285), Expect = 6e-26
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +2
Query: 59 DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR 232
DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR
Sbjct: 496 DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR 553
>UniRef50_Q5KTL1 Cluster: Putative uncharacterized protein; n=1;
Bombyx mori|Rep: Putative uncharacterized protein -
Bombyx mori (Silk moth)
Length = 37
Score = 71.7 bits (168), Expect = 8e-12
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +2
Query: 239 MAYISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQ 349
M YI R+KPLSV IGFFNAYGLANQRDQV DFLRDHQ
Sbjct: 1 MTYIDRMKPLSVRIGFFNAYGLANQRDQVCDFLRDHQ 37
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 64.5 bits (150), Expect = 1e-09
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 266 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS 445
LS + F+NA GL RD++ +F+ Q+DI LV ET L+P DPKI + + R DR
Sbjct: 486 LSAFVAFWNANGLRAARDELEEFVDRLQLDIVLVCETKLQPQTTDPKIRGFTLHRADRGI 545
Query: 446 ARGGGTAIYY-RRALHCV 496
GGGTAI+ R H V
Sbjct: 546 GPGGGTAIFVSNRIKHSV 563
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448
S + F+NA GL R+++ +F+ Q+DI LV ET L+P DPKI ++ + R DR
Sbjct: 130 SFQVAFWNANGLRAARNELEEFVDRLQLDIVLVCETKLQPQTTDPKIRDFTLHRADRGIG 189
Query: 449 RGGGTAIYY-RRALHCV 496
GGGTAI+ R H V
Sbjct: 190 PGGGTAIFVSNRIKHSV 206
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 46.0 bits (104), Expect = 5e-04
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448
++ I +NA + N+R ++ FL ++ I I L+ ET L + R I Y + RNDR +
Sbjct: 11 NLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKES 69
Query: 449 RGGGTAI 469
RGGG AI
Sbjct: 70 RGGGVAI 76
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 45.2 bits (102), Expect = 8e-04
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +2
Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448
S+ + ++NA GL ++ D+L +D+ + ET LKP + +Y + R DR+
Sbjct: 7 SINVLYWNANGLTDKMLAFLDYLSKQNVDVACISETFLKPNSKIDSHPDYVIHRLDRVDR 66
Query: 449 RGGGTAIYYRRAL 487
GG AI +R L
Sbjct: 67 PKGGVAIIVKRNL 79
>UniRef50_Q3LG55 Cluster: Reverse transcriptase; n=4; Bilateria|Rep:
Reverse transcriptase - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 965
Score = 40.7 bits (91), Expect = 0.018
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +2
Query: 245 YISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKP---ARRDPKIAN 415
++S I LS+++G +N N+ D ++ ++ + ET L+P A AN
Sbjct: 30 HVSTISQLSLSVGLWNCQSAVNKADFITSIATYSDYNLMALTETWLRPEDTATHATLSAN 89
Query: 416 YNMXRNDRLSARGGGTAI 469
++ R + RGGGT +
Sbjct: 90 FSFSHTPRQTGRGGGTGL 107
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 39.9 bits (89), Expect = 0.031
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS- 445
++ IG +NA GL +++ FL DH ID+ L ET ++ +R + Y M S
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQR-IYLPGYLMYHAHHPSG 63
Query: 446 -ARGGGTAIYYRRALH 490
+RGG I R H
Sbjct: 64 NSRGGSAVIIKSRLCH 79
>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
Schistosoma|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 831
Score = 38.3 bits (85), Expect = 0.095
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463
NA + N++ ++ F +Q + ++ E D I+ NY + R+DRL RGGG
Sbjct: 5 NARSICNKKTDLALFASIYQPSLIMISEAWTNSNISDLSISLDNYLLYRSDRLKGRGGGC 64
Query: 464 AIYYRRALH 490
IY +L+
Sbjct: 65 LIYAHSSLN 73
>UniRef50_UPI0000E4A868 Cluster: PREDICTED: similar to
glutamine-dependent nad(+) synthetase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
glutamine-dependent nad(+) synthetase -
Strongylocentrotus purpuratus
Length = 863
Score = 37.5 bits (83), Expect = 0.17
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 281 GFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA-----NYNMXRNDRLS 445
G N+ L N+ DF+ DH++D + ET L + D +A +Y R+S
Sbjct: 140 GTLNSRSLRNKSTIFQDFVVDHKLDFVCICETWLS-SDDDAVVADLCPGSYIFKHCPRVS 198
Query: 446 ARGGGTAIYYRRALHCV 496
RGGG A Y+ +L +
Sbjct: 199 GRGGGVAFLYKDSLQVI 215
>UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 751
Score = 36.7 bits (81), Expect = 0.29
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 284 FFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSARGGGT 463
F+N + +++++ L++ IDI + E+ LKP + + KIA +N R DR +GGG
Sbjct: 12 FWNPRSIKPRKNELGHILQE--IDILVCVESWLKP-KDNFKIAGFNTYRKDREDTQGGGI 68
Query: 464 AIYYRR 481
R+
Sbjct: 69 LYLIRK 74
>UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1;
Schistosoma mansoni|Rep: Endonuclease-reverse
transcriptase - Schistosoma mansoni (Blood fluke)
Length = 1067
Score = 35.9 bits (79), Expect = 0.51
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 272 VTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDP--KIANYNMXRNDRLS 445
+T+ NA + N+ Q+ L H + L+ E+ L D +I Y + R DR++
Sbjct: 127 LTLMLINARSIQNKMTQLRALLLLHSPSLVLITESWLSSDITDTYLQIDTYELFRCDRVT 186
Query: 446 ARGGGTAIY 472
+GGG IY
Sbjct: 187 KKGGGCLIY 195
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 35.9 bits (79), Expect = 0.51
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 263 PLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY-NMXRNDR 439
PL + + +NA G++ + +V F+R H+ID+ L+ ET K A PK+ + ND
Sbjct: 3 PLRILV--WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGA-ETPKLFGFVAYTANDP 59
Query: 440 LSARG-GGTAIYYRRAL 487
GG AI + +L
Sbjct: 60 SGGNAKGGAAILIKNSL 76
>UniRef50_A6S863 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 477
Score = 34.7 bits (76), Expect = 1.2
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 122 GDAIRAASTAQHFIAVVQEY-ADVYASLNTYVLPSLRR*SMAYISRIKPLSVTIG 283
G R +T Q F VV+ Y V ASL + +P + + Y++ +PLSV++G
Sbjct: 177 GSCARLVATLQAFKRVVESYKTPVGASLTRHFIPHVLSPQIEYLASCRPLSVSMG 231
>UniRef50_A7RML8 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 297
Score = 34.3 bits (75), Expect = 1.5
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463
N LA + D+V + + + +D+ + ET L+ + IA YN+ R DR + GG
Sbjct: 92 NVMSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 151
Query: 464 AIYYRRAL 487
I+ + ++
Sbjct: 152 CIFIKDSI 159
Score = 32.7 bits (71), Expect = 4.7
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463
N LA + D+V + + + +D+ + ET L+ + IA YN+ R DR + GG
Sbjct: 198 NVMSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 257
Query: 464 AIYYRRAL 487
I + ++
Sbjct: 258 CILIKDSI 265
>UniRef50_A7SP32 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 211
Score = 33.9 bits (74), Expect = 2.0
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463
N LA + D+V + + + +D+ + ET L+ + IA YN+ R DR + GG
Sbjct: 4 NVRSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 63
Query: 464 AIYYRRAL 487
I+ + ++
Sbjct: 64 CIFIKDSI 71
>UniRef50_UPI0000E46BAD Cluster: PREDICTED: similar to ReO_6; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
ReO_6 - Strongylocentrotus purpuratus
Length = 1194
Score = 33.5 bits (73), Expect = 2.7
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 275 TIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSA 448
TI N L N+ D+ S + + D+ +V ET + + + A +Y + R S
Sbjct: 141 TIYMCNPRSLNNKLDEFSVVVHELYCDVCVVTETWFRADQPESDFAVDDYLVFAKSRDSR 200
Query: 449 RGGGTAIY 472
RGGG AIY
Sbjct: 201 RGGGVAIY 208
>UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and
camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
camp and camp-inhibited cgmp 3,5-cyclic
phosphodiesterase - Strongylocentrotus purpuratus
Length = 1197
Score = 32.3 bits (70), Expect = 6.2
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 293 AYGLANQRDQVSDFLRDHQIDIFLVQETLLKPAR-RDPKIAN-YNMXRNDRLSARGGGTA 466
A + N+ D++ ++ + D+ V ET + D N + + DRL+ RGGG A
Sbjct: 265 AASMNNKLDELYATVQVRRCDLVAVTETWFSESNPADANEMNGFTLFHKDRLNKRGGGVA 324
Query: 467 IYYRRAL 487
+Y R L
Sbjct: 325 LYARNDL 331
>UniRef50_Q60QT4 Cluster: Putative uncharacterized protein CBG21685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG21685 - Caenorhabditis
briggsae
Length = 299
Score = 32.3 bits (70), Expect = 6.2
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Frame = +2
Query: 308 NQRDQV--SDFLRDHQIDIFLVQETLLKPARRD--PKIANYNMXRNDRLS----ARGGGT 463
+QR QV SD L D+QID+ V E+ L P+ D + + R DR S +GGG
Sbjct: 204 DQRLQVLHSDML-DNQIDLHFVTESFLSPSVPDSLSSSSTLHCLRFDRRSPSPKGKGGGV 262
Query: 464 AIYYRRALHCV 496
A++ R+ + V
Sbjct: 263 AVFARKDIQLV 273
>UniRef50_A5C6D8 Cluster: Putative uncharacterized protein; n=5; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 2064
Score = 31.9 bits (69), Expect = 8.2
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 257 IKPLSVTIGFFNAYGLANQRDQ--VSDFLRDHQIDIFLVQET 376
+K L + I +N GL +++ + V DFLR + D+ ++QET
Sbjct: 1207 LKSLDIKIISWNTRGLGSRKKRRVVKDFLRSEKXDVVMIQET 1248
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,845,158
Number of Sequences: 1657284
Number of extensions: 7072159
Number of successful extensions: 20159
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 19580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20147
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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