BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1009 (498 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 169 3e-41 UniRef50_Q9BPP9 Cluster: Gag-like protein; n=2; Bombyx mori|Rep:... 118 6e-26 UniRef50_Q5KTL1 Cluster: Putative uncharacterized protein; n=1; ... 72 8e-12 UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 64 1e-09 UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 61 1e-08 UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 46 5e-04 UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 45 8e-04 UniRef50_Q3LG55 Cluster: Reverse transcriptase; n=4; Bilateria|R... 41 0.018 UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 40 0.031 UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2... 38 0.095 UniRef50_UPI0000E4A868 Cluster: PREDICTED: similar to glutamine-... 38 0.17 UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like p... 37 0.29 UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1... 36 0.51 UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 36 0.51 UniRef50_A6S863 Cluster: Putative uncharacterized protein; n=2; ... 35 1.2 UniRef50_A7RML8 Cluster: Predicted protein; n=2; Nematostella ve... 34 1.5 UniRef50_A7SP32 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.0 UniRef50_UPI0000E46BAD Cluster: PREDICTED: similar to ReO_6; n=3... 33 2.7 UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c... 32 6.2 UniRef50_Q60QT4 Cluster: Putative uncharacterized protein CBG216... 32 6.2 UniRef50_A5C6D8 Cluster: Putative uncharacterized protein; n=5; ... 32 8.2 >UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like protein; n=9; cellular organisms|Rep: Endonuclease and reverse transcriptase-like protein - Bombyx mori (Silk moth) Length = 960 Score = 169 bits (411), Expect = 3e-41 Identities = 78/86 (90%), Positives = 81/86 (94%) Frame = +2 Query: 239 MAYISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY 418 MAY SR+KPLSVTIGFFNAYGLANQRDQV DFLRDHQIDIFLVQETLLKPARRDPKIANY Sbjct: 1 MAYKSRLKPLSVTIGFFNAYGLANQRDQVCDFLRDHQIDIFLVQETLLKPARRDPKIANY 60 Query: 419 NMXRNDRLSARGGGTAIYYRRALHCV 496 NM RNDR +ARGGGT IYYRRALHC+ Sbjct: 61 NMVRNDRRTARGGGTVIYYRRALHCI 86 >UniRef50_Q9BPP9 Cluster: Gag-like protein; n=2; Bombyx mori|Rep: Gag-like protein - Bombyx mori (Silk moth) Length = 553 Score = 118 bits (285), Expect = 6e-26 Identities = 58/58 (100%), Positives = 58/58 (100%) Frame = +2 Query: 59 DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR 232 DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR Sbjct: 496 DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR 553 >UniRef50_Q5KTL1 Cluster: Putative uncharacterized protein; n=1; Bombyx mori|Rep: Putative uncharacterized protein - Bombyx mori (Silk moth) Length = 37 Score = 71.7 bits (168), Expect = 8e-12 Identities = 32/37 (86%), Positives = 33/37 (89%) Frame = +2 Query: 239 MAYISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQ 349 M YI R+KPLSV IGFFNAYGLANQRDQV DFLRDHQ Sbjct: 1 MTYIDRMKPLSVRIGFFNAYGLANQRDQVCDFLRDHQ 37 >UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase) - Tribolium castaneum Length = 1336 Score = 64.5 bits (150), Expect = 1e-09 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%) Frame = +2 Query: 266 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS 445 LS + F+NA GL RD++ +F+ Q+DI LV ET L+P DPKI + + R DR Sbjct: 486 LSAFVAFWNANGLRAARDELEEFVDRLQLDIVLVCETKLQPQTTDPKIRGFTLHRADRGI 545 Query: 446 ARGGGTAIYY-RRALHCV 496 GGGTAI+ R H V Sbjct: 546 GPGGGTAIFVSNRIKHSV 563 >UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase), partial; n=1; Tribolium castaneum|Rep: PREDICTED: similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase), partial - Tribolium castaneum Length = 830 Score = 61.3 bits (142), Expect = 1e-08 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Frame = +2 Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448 S + F+NA GL R+++ +F+ Q+DI LV ET L+P DPKI ++ + R DR Sbjct: 130 SFQVAFWNANGLRAARNELEEFVDRLQLDIVLVCETKLQPQTTDPKIRDFTLHRADRGIG 189 Query: 449 RGGGTAIYY-RRALHCV 496 GGGTAI+ R H V Sbjct: 190 PGGGTAIFVSNRIKHSV 206 >UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep: ORF1 - Drosophila melanogaster (Fruit fly) Length = 884 Score = 46.0 bits (104), Expect = 5e-04 Identities = 26/67 (38%), Positives = 39/67 (58%) Frame = +2 Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448 ++ I +NA + N+R ++ FL ++ I I L+ ET L + R I Y + RNDR + Sbjct: 11 NLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKES 69 Query: 449 RGGGTAI 469 RGGG AI Sbjct: 70 RGGGVAI 76 >UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; n=80; Culicimorpha|Rep: Reverse transcriptase homolog protein - Chironomus thummi Length = 883 Score = 45.2 bits (102), Expect = 8e-04 Identities = 23/73 (31%), Positives = 38/73 (52%) Frame = +2 Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448 S+ + ++NA GL ++ D+L +D+ + ET LKP + +Y + R DR+ Sbjct: 7 SINVLYWNANGLTDKMLAFLDYLSKQNVDVACISETFLKPNSKIDSHPDYVIHRLDRVDR 66 Query: 449 RGGGTAIYYRRAL 487 GG AI +R L Sbjct: 67 PKGGVAIIVKRNL 79 >UniRef50_Q3LG55 Cluster: Reverse transcriptase; n=4; Bilateria|Rep: Reverse transcriptase - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 965 Score = 40.7 bits (91), Expect = 0.018 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Frame = +2 Query: 245 YISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKP---ARRDPKIAN 415 ++S I LS+++G +N N+ D ++ ++ + ET L+P A AN Sbjct: 30 HVSTISQLSLSVGLWNCQSAVNKADFITSIATYSDYNLMALTETWLRPEDTATHATLSAN 89 Query: 416 YNMXRNDRLSARGGGTAI 469 ++ R + RGGGT + Sbjct: 90 FSFSHTPRQTGRGGGTGL 107 >UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA polymerase from mobile element jockey - Drosophila melanogaster (Fruit fly) Length = 916 Score = 39.9 bits (89), Expect = 0.031 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +2 Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS- 445 ++ IG +NA GL +++ FL DH ID+ L ET ++ +R + Y M S Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQR-IYLPGYLMYHAHHPSG 63 Query: 446 -ARGGGTAIYYRRALH 490 +RGG I R H Sbjct: 64 NSRGGSAVIIKSRLCH 79 >UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2; Schistosoma|Rep: Endonuclease-reverse transcriptase - Schistosoma mansoni (Blood fluke) Length = 831 Score = 38.3 bits (85), Expect = 0.095 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Frame = +2 Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463 NA + N++ ++ F +Q + ++ E D I+ NY + R+DRL RGGG Sbjct: 5 NARSICNKKTDLALFASIYQPSLIMISEAWTNSNISDLSISLDNYLLYRSDRLKGRGGGC 64 Query: 464 AIYYRRALH 490 IY +L+ Sbjct: 65 LIYAHSSLN 73 >UniRef50_UPI0000E4A868 Cluster: PREDICTED: similar to glutamine-dependent nad(+) synthetase; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to glutamine-dependent nad(+) synthetase - Strongylocentrotus purpuratus Length = 863 Score = 37.5 bits (83), Expect = 0.17 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Frame = +2 Query: 281 GFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA-----NYNMXRNDRLS 445 G N+ L N+ DF+ DH++D + ET L + D +A +Y R+S Sbjct: 140 GTLNSRSLRNKSTIFQDFVVDHKLDFVCICETWLS-SDDDAVVADLCPGSYIFKHCPRVS 198 Query: 446 ARGGGTAIYYRRALHCV 496 RGGG A Y+ +L + Sbjct: 199 GRGGGVAFLYKDSLQVI 215 >UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to pol-like protein - Nasonia vitripennis Length = 751 Score = 36.7 bits (81), Expect = 0.29 Identities = 21/66 (31%), Positives = 37/66 (56%) Frame = +2 Query: 284 FFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSARGGGT 463 F+N + +++++ L++ IDI + E+ LKP + + KIA +N R DR +GGG Sbjct: 12 FWNPRSIKPRKNELGHILQE--IDILVCVESWLKP-KDNFKIAGFNTYRKDREDTQGGGI 68 Query: 464 AIYYRR 481 R+ Sbjct: 69 LYLIRK 74 >UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1; Schistosoma mansoni|Rep: Endonuclease-reverse transcriptase - Schistosoma mansoni (Blood fluke) Length = 1067 Score = 35.9 bits (79), Expect = 0.51 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +2 Query: 272 VTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDP--KIANYNMXRNDRLS 445 +T+ NA + N+ Q+ L H + L+ E+ L D +I Y + R DR++ Sbjct: 127 LTLMLINARSIQNKMTQLRALLLLHSPSLVLITESWLSSDITDTYLQIDTYELFRCDRVT 186 Query: 446 ARGGGTAIY 472 +GGG IY Sbjct: 187 KKGGGCLIY 195 >UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from transposon X-element; n=1; Drosophila melanogaster|Rep: Probable RNA-directed DNA polymerase from transposon X-element - Drosophila melanogaster (Fruit fly) Length = 908 Score = 35.9 bits (79), Expect = 0.51 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%) Frame = +2 Query: 263 PLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY-NMXRNDR 439 PL + + +NA G++ + +V F+R H+ID+ L+ ET K A PK+ + ND Sbjct: 3 PLRILV--WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGA-ETPKLFGFVAYTANDP 59 Query: 440 LSARG-GGTAIYYRRAL 487 GG AI + +L Sbjct: 60 SGGNAKGGAAILIKNSL 76 >UniRef50_A6S863 Cluster: Putative uncharacterized protein; n=2; Sclerotiniaceae|Rep: Putative uncharacterized protein - Botryotinia fuckeliana B05.10 Length = 477 Score = 34.7 bits (76), Expect = 1.2 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = +2 Query: 122 GDAIRAASTAQHFIAVVQEY-ADVYASLNTYVLPSLRR*SMAYISRIKPLSVTIG 283 G R +T Q F VV+ Y V ASL + +P + + Y++ +PLSV++G Sbjct: 177 GSCARLVATLQAFKRVVESYKTPVGASLTRHFIPHVLSPQIEYLASCRPLSVSMG 231 >UniRef50_A7RML8 Cluster: Predicted protein; n=2; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 297 Score = 34.3 bits (75), Expect = 1.5 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = +2 Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463 N LA + D+V + + + +D+ + ET L+ + IA YN+ R DR + GG Sbjct: 92 NVMSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 151 Query: 464 AIYYRRAL 487 I+ + ++ Sbjct: 152 CIFIKDSI 159 Score = 32.7 bits (71), Expect = 4.7 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = +2 Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463 N LA + D+V + + + +D+ + ET L+ + IA YN+ R DR + GG Sbjct: 198 NVMSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 257 Query: 464 AIYYRRAL 487 I + ++ Sbjct: 258 CILIKDSI 265 >UniRef50_A7SP32 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 211 Score = 33.9 bits (74), Expect = 2.0 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = +2 Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463 N LA + D+V + + + +D+ + ET L+ + IA YN+ R DR + GG Sbjct: 4 NVRSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 63 Query: 464 AIYYRRAL 487 I+ + ++ Sbjct: 64 CIFIKDSI 71 >UniRef50_UPI0000E46BAD Cluster: PREDICTED: similar to ReO_6; n=3; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ReO_6 - Strongylocentrotus purpuratus Length = 1194 Score = 33.5 bits (73), Expect = 2.7 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = +2 Query: 275 TIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSA 448 TI N L N+ D+ S + + D+ +V ET + + + A +Y + R S Sbjct: 141 TIYMCNPRSLNNKLDEFSVVVHELYCDVCVVTETWFRADQPESDFAVDDYLVFAKSRDSR 200 Query: 449 RGGGTAIY 472 RGGG AIY Sbjct: 201 RGGGVAIY 208 >UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to camp and camp-inhibited cgmp 3,5-cyclic phosphodiesterase - Strongylocentrotus purpuratus Length = 1197 Score = 32.3 bits (70), Expect = 6.2 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = +2 Query: 293 AYGLANQRDQVSDFLRDHQIDIFLVQETLLKPAR-RDPKIAN-YNMXRNDRLSARGGGTA 466 A + N+ D++ ++ + D+ V ET + D N + + DRL+ RGGG A Sbjct: 265 AASMNNKLDELYATVQVRRCDLVAVTETWFSESNPADANEMNGFTLFHKDRLNKRGGGVA 324 Query: 467 IYYRRAL 487 +Y R L Sbjct: 325 LYARNDL 331 >UniRef50_Q60QT4 Cluster: Putative uncharacterized protein CBG21685; n=1; Caenorhabditis briggsae|Rep: Putative uncharacterized protein CBG21685 - Caenorhabditis briggsae Length = 299 Score = 32.3 bits (70), Expect = 6.2 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%) Frame = +2 Query: 308 NQRDQV--SDFLRDHQIDIFLVQETLLKPARRD--PKIANYNMXRNDRLS----ARGGGT 463 +QR QV SD L D+QID+ V E+ L P+ D + + R DR S +GGG Sbjct: 204 DQRLQVLHSDML-DNQIDLHFVTESFLSPSVPDSLSSSSTLHCLRFDRRSPSPKGKGGGV 262 Query: 464 AIYYRRALHCV 496 A++ R+ + V Sbjct: 263 AVFARKDIQLV 273 >UniRef50_A5C6D8 Cluster: Putative uncharacterized protein; n=5; Vitis vinifera|Rep: Putative uncharacterized protein - Vitis vinifera (Grape) Length = 2064 Score = 31.9 bits (69), Expect = 8.2 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%) Frame = +2 Query: 257 IKPLSVTIGFFNAYGLANQRDQ--VSDFLRDHQIDIFLVQET 376 +K L + I +N GL +++ + V DFLR + D+ ++QET Sbjct: 1207 LKSLDIKIISWNTRGLGSRKKRRVVKDFLRSEKXDVVMIQET 1248 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 403,845,158 Number of Sequences: 1657284 Number of extensions: 7072159 Number of successful extensions: 20159 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 19580 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 20147 length of database: 575,637,011 effective HSP length: 95 effective length of database: 418,195,031 effective search space used: 29273652170 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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