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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1009
         (498 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-...   169   3e-41
UniRef50_Q9BPP9 Cluster: Gag-like protein; n=2; Bombyx mori|Rep:...   118   6e-26
UniRef50_Q5KTL1 Cluster: Putative uncharacterized protein; n=1; ...    72   8e-12
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct...    64   1e-09
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct...    61   1e-08
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:...    46   5e-04
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ...    45   8e-04
UniRef50_Q3LG55 Cluster: Reverse transcriptase; n=4; Bilateria|R...    41   0.018
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile...    40   0.031
UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2...    38   0.095
UniRef50_UPI0000E4A868 Cluster: PREDICTED: similar to glutamine-...    38   0.17 
UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like p...    37   0.29 
UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1...    36   0.51 
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr...    36   0.51 
UniRef50_A6S863 Cluster: Putative uncharacterized protein; n=2; ...    35   1.2  
UniRef50_A7RML8 Cluster: Predicted protein; n=2; Nematostella ve...    34   1.5  
UniRef50_A7SP32 Cluster: Predicted protein; n=1; Nematostella ve...    34   2.0  
UniRef50_UPI0000E46BAD Cluster: PREDICTED: similar to ReO_6; n=3...    33   2.7  
UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and c...    32   6.2  
UniRef50_Q60QT4 Cluster: Putative uncharacterized protein CBG216...    32   6.2  
UniRef50_A5C6D8 Cluster: Putative uncharacterized protein; n=5; ...    32   8.2  

>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
           transcriptase-like protein; n=9; cellular organisms|Rep:
           Endonuclease and reverse transcriptase-like protein -
           Bombyx mori (Silk moth)
          Length = 960

 Score =  169 bits (411), Expect = 3e-41
 Identities = 78/86 (90%), Positives = 81/86 (94%)
 Frame = +2

Query: 239 MAYISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY 418
           MAY SR+KPLSVTIGFFNAYGLANQRDQV DFLRDHQIDIFLVQETLLKPARRDPKIANY
Sbjct: 1   MAYKSRLKPLSVTIGFFNAYGLANQRDQVCDFLRDHQIDIFLVQETLLKPARRDPKIANY 60

Query: 419 NMXRNDRLSARGGGTAIYYRRALHCV 496
           NM RNDR +ARGGGT IYYRRALHC+
Sbjct: 61  NMVRNDRRTARGGGTVIYYRRALHCI 86


>UniRef50_Q9BPP9 Cluster: Gag-like protein; n=2; Bombyx mori|Rep:
           Gag-like protein - Bombyx mori (Silk moth)
          Length = 553

 Score =  118 bits (285), Expect = 6e-26
 Identities = 58/58 (100%), Positives = 58/58 (100%)
 Frame = +2

Query: 59  DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR 232
           DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR
Sbjct: 496 DNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR 553


>UniRef50_Q5KTL1 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 37

 Score = 71.7 bits (168), Expect = 8e-12
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = +2

Query: 239 MAYISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQ 349
           M YI R+KPLSV IGFFNAYGLANQRDQV DFLRDHQ
Sbjct: 1   MTYIDRMKPLSVRIGFFNAYGLANQRDQVCDFLRDHQ 37


>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
           DNA polymerase from mobile element jockey (Reverse
           transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
           similar to RNA-directed DNA polymerase from mobile
           element jockey (Reverse transcriptase) - Tribolium
           castaneum
          Length = 1336

 Score = 64.5 bits (150), Expect = 1e-09
 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = +2

Query: 266 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS 445
           LS  + F+NA GL   RD++ +F+   Q+DI LV ET L+P   DPKI  + + R DR  
Sbjct: 486 LSAFVAFWNANGLRAARDELEEFVDRLQLDIVLVCETKLQPQTTDPKIRGFTLHRADRGI 545

Query: 446 ARGGGTAIYY-RRALHCV 496
             GGGTAI+   R  H V
Sbjct: 546 GPGGGTAIFVSNRIKHSV 563


>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
           DNA polymerase from mobile element jockey (Reverse
           transcriptase), partial; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to RNA-directed DNA polymerase from
           mobile element jockey (Reverse transcriptase), partial -
           Tribolium castaneum
          Length = 830

 Score = 61.3 bits (142), Expect = 1e-08
 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = +2

Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448
           S  + F+NA GL   R+++ +F+   Q+DI LV ET L+P   DPKI ++ + R DR   
Sbjct: 130 SFQVAFWNANGLRAARNELEEFVDRLQLDIVLVCETKLQPQTTDPKIRDFTLHRADRGIG 189

Query: 449 RGGGTAIYY-RRALHCV 496
            GGGTAI+   R  H V
Sbjct: 190 PGGGTAIFVSNRIKHSV 206


>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
           ORF1 - Drosophila melanogaster (Fruit fly)
          Length = 884

 Score = 46.0 bits (104), Expect = 5e-04
 Identities = 26/67 (38%), Positives = 39/67 (58%)
 Frame = +2

Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448
           ++ I  +NA  + N+R ++  FL ++ I I L+ ET L  + R   I  Y + RNDR  +
Sbjct: 11  NLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKES 69

Query: 449 RGGGTAI 469
           RGGG AI
Sbjct: 70  RGGGVAI 76


>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
           n=80; Culicimorpha|Rep: Reverse transcriptase homolog
           protein - Chironomus thummi
          Length = 883

 Score = 45.2 bits (102), Expect = 8e-04
 Identities = 23/73 (31%), Positives = 38/73 (52%)
 Frame = +2

Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448
           S+ + ++NA GL ++     D+L    +D+  + ET LKP  +     +Y + R DR+  
Sbjct: 7   SINVLYWNANGLTDKMLAFLDYLSKQNVDVACISETFLKPNSKIDSHPDYVIHRLDRVDR 66

Query: 449 RGGGTAIYYRRAL 487
             GG AI  +R L
Sbjct: 67  PKGGVAIIVKRNL 79


>UniRef50_Q3LG55 Cluster: Reverse transcriptase; n=4; Bilateria|Rep:
           Reverse transcriptase - Danio rerio (Zebrafish)
           (Brachydanio rerio)
          Length = 965

 Score = 40.7 bits (91), Expect = 0.018
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
 Frame = +2

Query: 245 YISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKP---ARRDPKIAN 415
           ++S I  LS+++G +N     N+ D ++        ++  + ET L+P   A      AN
Sbjct: 30  HVSTISQLSLSVGLWNCQSAVNKADFITSIATYSDYNLMALTETWLRPEDTATHATLSAN 89

Query: 416 YNMXRNDRLSARGGGTAI 469
           ++     R + RGGGT +
Sbjct: 90  FSFSHTPRQTGRGGGTGL 107


>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
           element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
           polymerase from mobile element jockey - Drosophila
           melanogaster (Fruit fly)
          Length = 916

 Score = 39.9 bits (89), Expect = 0.031
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +2

Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS- 445
           ++ IG +NA GL    +++  FL DH ID+ L  ET ++  +R   +  Y M      S 
Sbjct: 5   TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQR-IYLPGYLMYHAHHPSG 63

Query: 446 -ARGGGTAIYYRRALH 490
            +RGG   I   R  H
Sbjct: 64  NSRGGSAVIIKSRLCH 79


>UniRef50_Q4QQE6 Cluster: Endonuclease-reverse transcriptase; n=2;
           Schistosoma|Rep: Endonuclease-reverse transcriptase -
           Schistosoma mansoni (Blood fluke)
          Length = 831

 Score = 38.3 bits (85), Expect = 0.095
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +2

Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463
           NA  + N++  ++ F   +Q  + ++ E        D  I+  NY + R+DRL  RGGG 
Sbjct: 5   NARSICNKKTDLALFASIYQPSLIMISEAWTNSNISDLSISLDNYLLYRSDRLKGRGGGC 64

Query: 464 AIYYRRALH 490
            IY   +L+
Sbjct: 65  LIYAHSSLN 73


>UniRef50_UPI0000E4A868 Cluster: PREDICTED: similar to
           glutamine-dependent nad(+) synthetase; n=2;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           glutamine-dependent nad(+) synthetase -
           Strongylocentrotus purpuratus
          Length = 863

 Score = 37.5 bits (83), Expect = 0.17
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
 Frame = +2

Query: 281 GFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA-----NYNMXRNDRLS 445
           G  N+  L N+     DF+ DH++D   + ET L  +  D  +A     +Y      R+S
Sbjct: 140 GTLNSRSLRNKSTIFQDFVVDHKLDFVCICETWLS-SDDDAVVADLCPGSYIFKHCPRVS 198

Query: 446 ARGGGTAIYYRRALHCV 496
            RGGG A  Y+ +L  +
Sbjct: 199 GRGGGVAFLYKDSLQVI 215


>UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like
           protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to pol-like protein - Nasonia vitripennis
          Length = 751

 Score = 36.7 bits (81), Expect = 0.29
 Identities = 21/66 (31%), Positives = 37/66 (56%)
 Frame = +2

Query: 284 FFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSARGGGT 463
           F+N   +  +++++   L++  IDI +  E+ LKP + + KIA +N  R DR   +GGG 
Sbjct: 12  FWNPRSIKPRKNELGHILQE--IDILVCVESWLKP-KDNFKIAGFNTYRKDREDTQGGGI 68

Query: 464 AIYYRR 481
               R+
Sbjct: 69  LYLIRK 74


>UniRef50_Q4QQE0 Cluster: Endonuclease-reverse transcriptase; n=1;
           Schistosoma mansoni|Rep: Endonuclease-reverse
           transcriptase - Schistosoma mansoni (Blood fluke)
          Length = 1067

 Score = 35.9 bits (79), Expect = 0.51
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +2

Query: 272 VTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDP--KIANYNMXRNDRLS 445
           +T+   NA  + N+  Q+   L  H   + L+ E+ L     D   +I  Y + R DR++
Sbjct: 127 LTLMLINARSIQNKMTQLRALLLLHSPSLVLITESWLSSDITDTYLQIDTYELFRCDRVT 186

Query: 446 ARGGGTAIY 472
            +GGG  IY
Sbjct: 187 KKGGGCLIY 195


>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
           transposon X-element; n=1; Drosophila melanogaster|Rep:
           Probable RNA-directed DNA polymerase from transposon
           X-element - Drosophila melanogaster (Fruit fly)
          Length = 908

 Score = 35.9 bits (79), Expect = 0.51
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = +2

Query: 263 PLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY-NMXRNDR 439
           PL + +  +NA G++ +  +V  F+R H+ID+ L+ ET  K A   PK+  +     ND 
Sbjct: 3   PLRILV--WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGA-ETPKLFGFVAYTANDP 59

Query: 440 LSARG-GGTAIYYRRAL 487
                 GG AI  + +L
Sbjct: 60  SGGNAKGGAAILIKNSL 76


>UniRef50_A6S863 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 477

 Score = 34.7 bits (76), Expect = 1.2
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +2

Query: 122 GDAIRAASTAQHFIAVVQEY-ADVYASLNTYVLPSLRR*SMAYISRIKPLSVTIG 283
           G   R  +T Q F  VV+ Y   V ASL  + +P +    + Y++  +PLSV++G
Sbjct: 177 GSCARLVATLQAFKRVVESYKTPVGASLTRHFIPHVLSPQIEYLASCRPLSVSMG 231


>UniRef50_A7RML8 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 297

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +2

Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463
           N   LA + D+V + + +  +D+  + ET L+    +  IA   YN+ R DR   + GG 
Sbjct: 92  NVMSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 151

Query: 464 AIYYRRAL 487
            I+ + ++
Sbjct: 152 CIFIKDSI 159



 Score = 32.7 bits (71), Expect = 4.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463
           N   LA + D+V + + +  +D+  + ET L+    +  IA   YN+ R DR   + GG 
Sbjct: 198 NVMSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 257

Query: 464 AIYYRRAL 487
            I  + ++
Sbjct: 258 CILIKDSI 265


>UniRef50_A7SP32 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 211

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +2

Query: 290 NAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSARGGGT 463
           N   LA + D+V + + +  +D+  + ET L+    +  IA   YN+ R DR   + GG 
Sbjct: 4   NVRSLAPKIDEVREAISNANLDLACITETWLRNHIHNNVIAVSGYNLVRRDRTKDQHGGV 63

Query: 464 AIYYRRAL 487
            I+ + ++
Sbjct: 64  CIFIKDSI 71


>UniRef50_UPI0000E46BAD Cluster: PREDICTED: similar to ReO_6; n=3;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           ReO_6 - Strongylocentrotus purpuratus
          Length = 1194

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +2

Query: 275 TIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIA--NYNMXRNDRLSA 448
           TI   N   L N+ D+ S  + +   D+ +V ET  +  + +   A  +Y +    R S 
Sbjct: 141 TIYMCNPRSLNNKLDEFSVVVHELYCDVCVVTETWFRADQPESDFAVDDYLVFAKSRDSR 200

Query: 449 RGGGTAIY 472
           RGGG AIY
Sbjct: 201 RGGGVAIY 208


>UniRef50_UPI0000E48F4D Cluster: PREDICTED: similar to camp and
           camp-inhibited cgmp 3,5-cyclic phosphodiesterase; n=2;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           camp and camp-inhibited cgmp 3,5-cyclic
           phosphodiesterase - Strongylocentrotus purpuratus
          Length = 1197

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 293 AYGLANQRDQVSDFLRDHQIDIFLVQETLLKPAR-RDPKIAN-YNMXRNDRLSARGGGTA 466
           A  + N+ D++   ++  + D+  V ET    +   D    N + +   DRL+ RGGG A
Sbjct: 265 AASMNNKLDELYATVQVRRCDLVAVTETWFSESNPADANEMNGFTLFHKDRLNKRGGGVA 324

Query: 467 IYYRRAL 487
           +Y R  L
Sbjct: 325 LYARNDL 331


>UniRef50_Q60QT4 Cluster: Putative uncharacterized protein CBG21685;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG21685 - Caenorhabditis
           briggsae
          Length = 299

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
 Frame = +2

Query: 308 NQRDQV--SDFLRDHQIDIFLVQETLLKPARRD--PKIANYNMXRNDRLS----ARGGGT 463
           +QR QV  SD L D+QID+  V E+ L P+  D     +  +  R DR S     +GGG 
Sbjct: 204 DQRLQVLHSDML-DNQIDLHFVTESFLSPSVPDSLSSSSTLHCLRFDRRSPSPKGKGGGV 262

Query: 464 AIYYRRALHCV 496
           A++ R+ +  V
Sbjct: 263 AVFARKDIQLV 273


>UniRef50_A5C6D8 Cluster: Putative uncharacterized protein; n=5; Vitis
            vinifera|Rep: Putative uncharacterized protein - Vitis
            vinifera (Grape)
          Length = 2064

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = +2

Query: 257  IKPLSVTIGFFNAYGLANQRDQ--VSDFLRDHQIDIFLVQET 376
            +K L + I  +N  GL +++ +  V DFLR  + D+ ++QET
Sbjct: 1207 LKSLDIKIISWNTRGLGSRKKRRVVKDFLRSEKXDVVMIQET 1248


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,845,158
Number of Sequences: 1657284
Number of extensions: 7072159
Number of successful extensions: 20159
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 19580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20147
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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