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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1009
         (498 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      46   3e-05
M38643-2|AAA28940.1|  192|Drosophila melanogaster protein ( D.me...    40   0.002
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    40   0.002
AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    36   0.030
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.       31   0.65 
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ...    29   3.5  
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    29   3.5  
AY071121-1|AAL48743.1|  119|Drosophila melanogaster RE17113p pro...    28   6.1  
AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB...    28   6.1  
AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA...    28   6.1  
AE014296-1399|AAN12016.1|  119|Drosophila melanogaster CG13679-P...    28   6.1  
AE014296-1398|AAF50465.1|  145|Drosophila melanogaster CG13679-P...    28   6.1  
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny...    28   8.1  
AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA...    28   8.1  

>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 26/67 (38%), Positives = 39/67 (58%)
 Frame = +2

Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448
           ++ I  +NA  + N+R ++  FL ++ I I L+ ET L  + R   I  Y + RNDR  +
Sbjct: 11  NLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKES 69

Query: 449 RGGGTAI 469
           RGGG AI
Sbjct: 70  RGGGVAI 76


>M38643-2|AAA28940.1|  192|Drosophila melanogaster protein (
           D.melanogaster mobileelement jockey gag-specific protein
           gene, complete cds.).
          Length = 192

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +2

Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS- 445
           ++ IG +NA GL    +++  FL DH ID+ L  ET ++  +R   +  Y M      S 
Sbjct: 5   TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQR-IYLPGYLMYHAHHPSG 63

Query: 446 -ARGGGTAIYYRRALH 490
            +RGG   I   R  H
Sbjct: 64  NSRGGSAVIIKSRLCH 79


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
           D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +2

Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS- 445
           ++ IG +NA GL    +++  FL DH ID+ L  ET ++  +R   +  Y M      S 
Sbjct: 5   TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQR-IYLPGYLMYHAHHPSG 63

Query: 446 -ARGGGTAIYYRRALH 490
            +RGG   I   R  H
Sbjct: 64  NSRGGSAVIIKSRLCH 79


>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = +2

Query: 263 PLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY-NMXRNDR 439
           PL + +  +NA G++ +  +V  F+R H+ID+ L+ ET  K A   PK+  +     ND 
Sbjct: 3   PLRILV--WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGA-ETPKLFGFVAYTANDP 59

Query: 440 LSARG-GGTAIYYRRAL 487
                 GG AI  + +L
Sbjct: 60  SGGNAKGGAAILIKNSL 76


>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
          Length = 1227

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 13/39 (33%), Positives = 26/39 (66%)
 Frame = +2

Query: 266 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLL 382
           +++TI  +N +G+ N  ++++  ++DH  DI  +QET L
Sbjct: 1   MTITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKL 39


>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
           protein.
          Length = 1219

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/77 (23%), Positives = 33/77 (42%)
 Frame = +2

Query: 266 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS 445
           +S+TI  +N  G  N    +   ++ +   I  +QET ++     P   NY +  N   +
Sbjct: 1   MSLTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATN 60

Query: 446 ARGGGTAIYYRRALHCV 496
             GG   + ++   H V
Sbjct: 61  RFGGVRLLVHKSIQHTV 77


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 407 IANYNMXRNDRLSARGGGTAI 469
           I  Y + RNDR  +RGGG AI
Sbjct: 4   IPEYTIYRNDRKESRGGGVAI 24


>AY071121-1|AAL48743.1|  119|Drosophila melanogaster RE17113p
           protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -1

Query: 306 ARP*ALKNPIVTDRGFILLIYAIDYR-RSDGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 130
           A P A   P V      +  YA  Y   S   +  F  AYT+AY+   A    A  AA  
Sbjct: 27  AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 86

Query: 129 ASPKA 115
           A+P A
Sbjct: 87  AAPIA 91


>AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB,
           isoform B protein.
          Length = 1091

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 198 DAYTSAYSCTTAIKCCAVEAARMASPKALTRSK 100
           D YT+A +   A++C  + AAR   P   T  K
Sbjct: 504 DIYTAALAAAAAVRCSPLPAARSVEPIYATAQK 536


>AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA,
           isoform A protein.
          Length = 1072

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 198 DAYTSAYSCTTAIKCCAVEAARMASPKALTRSK 100
           D YT+A +   A++C  + AAR   P   T  K
Sbjct: 485 DIYTAALAAAAAVRCSPLPAARSVEPIYATAQK 517


>AE014296-1399|AAN12016.1|  119|Drosophila melanogaster CG13679-PB,
           isoform B protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -1

Query: 306 ARP*ALKNPIVTDRGFILLIYAIDYR-RSDGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 130
           A P A   P V      +  YA  Y   S   +  F  AYT+AY+   A    A  AA  
Sbjct: 27  AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 86

Query: 129 ASPKA 115
           A+P A
Sbjct: 87  AAPIA 91


>AE014296-1398|AAF50465.1|  145|Drosophila melanogaster CG13679-PA,
           isoform A protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -1

Query: 306 ARP*ALKNPIVTDRGFILLIYAIDYR-RSDGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 130
           A P A   P V      +  YA  Y   S   +  F  AYT+AY+   A    A  AA  
Sbjct: 53  AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 112

Query: 129 ASPKA 115
           A+P A
Sbjct: 113 AAPIA 117


>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
           cyclase protein.
          Length = 2248

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 305 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIAN 415
           A   D+ S +LRDH +D F +   +  P RR P + N
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLN 461


>AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA
           protein.
          Length = 2248

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 305 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIAN 415
           A   D+ S +LRDH +D F +   +  P RR P + N
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLN 461


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,287,829
Number of Sequences: 53049
Number of extensions: 325495
Number of successful extensions: 1037
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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