Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1009
(498 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 46 3e-05
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 40 0.002
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 40 0.002
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 36 0.030
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 31 0.65
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 29 3.5
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 29 3.5
AY071121-1|AAL48743.1| 119|Drosophila melanogaster RE17113p pro... 28 6.1
AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB... 28 6.1
AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA... 28 6.1
AE014296-1399|AAN12016.1| 119|Drosophila melanogaster CG13679-P... 28 6.1
AE014296-1398|AAF50465.1| 145|Drosophila melanogaster CG13679-P... 28 6.1
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny... 28 8.1
AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA... 28 8.1
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLSA 448
++ I +NA + N+R ++ FL ++ I I L+ ET L + R I Y + RNDR +
Sbjct: 11 NLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKES 69
Query: 449 RGGGTAI 469
RGGG AI
Sbjct: 70 RGGGVAI 76
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS- 445
++ IG +NA GL +++ FL DH ID+ L ET ++ +R + Y M S
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQR-IYLPGYLMYHAHHPSG 63
Query: 446 -ARGGGTAIYYRRALH 490
+RGG I R H
Sbjct: 64 NSRGGSAVIIKSRLCH 79
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 269 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS- 445
++ IG +NA GL +++ FL DH ID+ L ET ++ +R + Y M S
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQR-IYLPGYLMYHAHHPSG 63
Query: 446 -ARGGGTAIYYRRALH 490
+RGG I R H
Sbjct: 64 NSRGGSAVIIKSRLCH 79
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 35.9 bits (79), Expect = 0.030
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 263 PLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY-NMXRNDR 439
PL + + +NA G++ + +V F+R H+ID+ L+ ET K A PK+ + ND
Sbjct: 3 PLRILV--WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGA-ETPKLFGFVAYTANDP 59
Query: 440 LSARG-GGTAIYYRRAL 487
GG AI + +L
Sbjct: 60 SGGNAKGGAAILIKNSL 76
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +2
Query: 266 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLL 382
+++TI +N +G+ N ++++ ++DH DI +QET L
Sbjct: 1 MTITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKL 39
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +2
Query: 266 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMXRNDRLS 445
+S+TI +N G N + ++ + I +QET ++ P NY + N +
Sbjct: 1 MSLTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATN 60
Query: 446 ARGGGTAIYYRRALHCV 496
GG + ++ H V
Sbjct: 61 RFGGVRLLVHKSIQHTV 77
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 407 IANYNMXRNDRLSARGGGTAI 469
I Y + RNDR +RGGG AI
Sbjct: 4 IPEYTIYRNDRKESRGGGVAI 24
>AY071121-1|AAL48743.1| 119|Drosophila melanogaster RE17113p
protein.
Length = 119
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 306 ARP*ALKNPIVTDRGFILLIYAIDYR-RSDGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 130
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 27 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 86
Query: 129 ASPKA 115
A+P A
Sbjct: 87 AAPIA 91
>AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB,
isoform B protein.
Length = 1091
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 198 DAYTSAYSCTTAIKCCAVEAARMASPKALTRSK 100
D YT+A + A++C + AAR P T K
Sbjct: 504 DIYTAALAAAAAVRCSPLPAARSVEPIYATAQK 536
>AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA,
isoform A protein.
Length = 1072
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 198 DAYTSAYSCTTAIKCCAVEAARMASPKALTRSK 100
D YT+A + A++C + AAR P T K
Sbjct: 485 DIYTAALAAAAAVRCSPLPAARSVEPIYATAQK 517
>AE014296-1399|AAN12016.1| 119|Drosophila melanogaster CG13679-PB,
isoform B protein.
Length = 119
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 306 ARP*ALKNPIVTDRGFILLIYAIDYR-RSDGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 130
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 27 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 86
Query: 129 ASPKA 115
A+P A
Sbjct: 87 AAPIA 91
>AE014296-1398|AAF50465.1| 145|Drosophila melanogaster CG13679-PA,
isoform A protein.
Length = 145
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 306 ARP*ALKNPIVTDRGFILLIYAIDYR-RSDGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 130
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 53 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 112
Query: 129 ASPKA 115
A+P A
Sbjct: 113 AAPIA 117
>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
cyclase protein.
Length = 2248
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 305 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIAN 415
A D+ S +LRDH +D F + + P RR P + N
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLN 461
>AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA
protein.
Length = 2248
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 305 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIAN 415
A D+ S +LRDH +D F + + P RR P + N
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLN 461
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,287,829
Number of Sequences: 53049
Number of extensions: 325495
Number of successful extensions: 1037
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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