BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1008 (352 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 22 1.6 DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 3.7 AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 3.7 AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 21 4.8 AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 4.8 AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 4.8 DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory pro... 20 8.5 >AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. Length = 199 Score = 22.2 bits (45), Expect = 1.6 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%) Frame = -3 Query: 266 WRGTP--RLKDHRRLGSGPCVEGST 198 W GT + + RR S PC G+T Sbjct: 174 WEGTTLSQSPNRRRASSNPCHNGAT 198 >DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein. Length = 2700 Score = 21.0 bits (42), Expect = 3.7 Identities = 9/23 (39%), Positives = 11/23 (47%) Frame = +3 Query: 255 SPAPSSPTWRTSTLRAAVCTPKT 323 S +SP W T+T R T T Sbjct: 1044 SSTTTSPWWTTTTTRRTTTTRPT 1066 Score = 20.2 bits (40), Expect = 6.4 Identities = 7/20 (35%), Positives = 11/20 (55%) Frame = +1 Query: 106 CTADSEGAQLKPEPQTGRPT 165 C + + KP+P T +PT Sbjct: 2199 CILGRDNDKTKPKPTTMKPT 2218 >AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless protein. Length = 302 Score = 21.0 bits (42), Expect = 3.7 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = +3 Query: 63 PSTCTTFPALRPAGLYC 113 PS PAL PAG C Sbjct: 155 PSIIDPGPALPPAGFLC 171 >AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neuroblasts defectiveprotein protein. Length = 224 Score = 20.6 bits (41), Expect = 4.8 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = -3 Query: 314 GTHCCP*RTCSPSR 273 G CC RTCS ++ Sbjct: 187 GNKCCCLRTCSSAK 200 >AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain transcription factor Labialprotein. Length = 353 Score = 20.6 bits (41), Expect = 4.8 Identities = 8/25 (32%), Positives = 13/25 (52%) Frame = +3 Query: 258 PAPSSPTWRTSTLRAAVCTPKTPKL 332 P P PT++ ++ V P PK+ Sbjct: 190 PQPVLPTYKWMQVKRNVPKPTVPKI 214 >AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein protein. Length = 253 Score = 20.6 bits (41), Expect = 4.8 Identities = 8/25 (32%), Positives = 13/25 (52%) Frame = +3 Query: 258 PAPSSPTWRTSTLRAAVCTPKTPKL 332 P P PT++ ++ V P PK+ Sbjct: 190 PQPVLPTYKWMQVKRNVPKPTVPKI 214 >DQ855494-1|ABH88181.1| 99|Tribolium castaneum chemosensory protein 8 protein. Length = 99 Score = 19.8 bits (39), Expect = 8.5 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = +1 Query: 28 VLKVTLQIS*DDHRPVLRSRLCALQGCTADSEGAQLK 138 V +V Q+ + + + LCAL D+ G Q+K Sbjct: 17 VYQVQGQLGLAGNNYIEKQLLCALDKAPCDALGNQIK 53 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 76,298 Number of Sequences: 336 Number of extensions: 1420 Number of successful extensions: 8 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 122,585 effective HSP length: 50 effective length of database: 105,785 effective search space used: 6981810 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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