BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1007 (547 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 28 0.23 AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 25 1.6 M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 5.0 AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 5.0 AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 8.7 >AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. Length = 2259 Score = 27.9 bits (59), Expect = 0.23 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -1 Query: 445 PLSTAIVAAEYVTWVAP 395 PLST + AEY WVAP Sbjct: 1934 PLSTGVTIAEYGHWVAP 1950 >AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. Length = 356 Score = 25.0 bits (52), Expect = 1.6 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +3 Query: 300 GLSQSTPLSPVCGSPHPLLAGH 365 G Q P +CG+ +P+L GH Sbjct: 7 GARQILPEDSLCGASYPILNGH 28 >M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. Length = 1212 Score = 23.4 bits (48), Expect = 5.0 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +2 Query: 515 LYWWEPLIGFL 547 +YWW PLI L Sbjct: 349 VYWWTPLIALL 359 >AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. Length = 1132 Score = 23.4 bits (48), Expect = 5.0 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +3 Query: 297 IGLSQSTPLSPVCGSPHPLLAGHRVEVIAPSSQGATHVT 413 IG +T L P+ P P+LA H P Q T T Sbjct: 562 IGSGSTTRLPPL-HQPFPMLANHAGGGAIPEGQEPTSTT 599 >AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcription factor protein. Length = 593 Score = 22.6 bits (46), Expect = 8.7 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +3 Query: 258 F*GA*AHSRPLLDIGLS 308 F G+ AH +PLL +G+S Sbjct: 334 FKGSPAHRKPLLSMGIS 350 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 588,908 Number of Sequences: 2352 Number of extensions: 12651 Number of successful extensions: 22 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 50460840 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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