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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1007
         (547 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127434-1|BAC86978.1|  292|Homo sapiens protein ( Homo sapiens ...    33   0.65 
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr...    31   2.6  
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr...    31   2.6  
AK055513-1|BAB70939.1|  131|Homo sapiens protein ( Homo sapiens ...    30   6.1  

>AK127434-1|BAC86978.1|  292|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45526 fis, clone BRTHA2027227. ).
          Length = 292

 Score = 33.1 bits (72), Expect = 0.65
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 275 PQPSTAGHRPLPIYT-TEPGLRLSSSTSCRPPCG 373
           PQ ++ GH PLP+ T T P +       CRP CG
Sbjct: 188 PQSASRGHLPLPLPTPTTPCISQPPGRRCRPHCG 221


>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
            protein.
          Length = 4262

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTE 325
            S  +T   SI V  T ++S +  TLST    T    T   ++S  P+TA    +P  T  
Sbjct: 1863 SEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTPR 1922

Query: 326  PG 331
             G
Sbjct: 1923 EG 1924



 Score = 31.1 bits (67), Expect = 2.6
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYT-T 322
            S  +T   SI V  T ++S +A+TLST    T I  T     S  P+TA    +PI T +
Sbjct: 2865 SEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPS 2924

Query: 323  EPGLRLSSSTSCRPPCGG 376
            E    L+S      P  G
Sbjct: 2925 EVSTPLTSILVSTVPVAG 2942



 Score = 30.7 bits (66), Expect = 3.5
 Identities = 23/65 (35%), Positives = 31/65 (47%)
 Frame = +2

Query: 155  TTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTEPGL 334
            +T   S+ V  T ++S +A+TLST    T    T     S  P+TA    LP  TT  G 
Sbjct: 1218 STPLTSMPVRHTPVASSEASTLSTSPVDTSTPVTTSAETSSSPTTAEGTSLPTSTTSEGS 1277

Query: 335  RLSSS 349
             L +S
Sbjct: 1278 TLLTS 1282



 Score = 30.7 bits (66), Expect = 3.5
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTE 325
            S  +T   S+ V+ T ++S +A TLST    T    T   + S  P+TA    +PI T  
Sbjct: 2806 SETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAEGIVVPISTAS 2865

Query: 326  PGLRLSSS 349
             G  L +S
Sbjct: 2866 EGSTLLTS 2873



 Score = 30.3 bits (65), Expect = 4.6
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 146 SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTE 325
           S  +T   S+ V  T L+S +A+TLST    T    T     S  P+T     +PI T  
Sbjct: 743 SEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPS 802

Query: 326 PGLRLSSS 349
            G  L +S
Sbjct: 803 EGSPLLTS 810



 Score = 29.9 bits (64), Expect = 6.1
 Identities = 24/68 (35%), Positives = 30/68 (44%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTE 325
            S  TT   S+ V  T + S +A TLST    T    T     S  P+TA    +PI T  
Sbjct: 2452 SEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVVPISTAS 2511

Query: 326  PGLRLSSS 349
             G  L +S
Sbjct: 2512 EGSTLLTS 2519



 Score = 29.9 bits (64), Expect = 6.1
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYT 319
            S  +T   S+ V    L+S +A+TLST    T I  T     S  P+TA    +PI T
Sbjct: 2570 SEGSTPLRSMPVSTKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSMPIST 2627


>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
            protein.
          Length = 4493

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTE 325
            S  +T   SI V  T ++S +  TLST    T    T   ++S  P+TA    +P  T  
Sbjct: 1863 SEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTPR 1922

Query: 326  PG 331
             G
Sbjct: 1923 EG 1924



 Score = 31.1 bits (67), Expect = 2.6
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYT-T 322
            S  +T   SI V  T ++S +A+TLST    T I  T     S  P+TA    +PI T +
Sbjct: 2865 SEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVTTSTEGSSSPTTAEGTSMPISTPS 2924

Query: 323  EPGLRLSSSTSCRPPCGG 376
            E    L+S      P  G
Sbjct: 2925 EVSTPLTSILVSTVPVAG 2942



 Score = 30.7 bits (66), Expect = 3.5
 Identities = 23/65 (35%), Positives = 31/65 (47%)
 Frame = +2

Query: 155  TTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTEPGL 334
            +T   S+ V  T ++S +A+TLST    T    T     S  P+TA    LP  TT  G 
Sbjct: 1218 STPLTSMPVRHTPVASSEASTLSTSPVDTSTPVTTSAETSSSPTTAEGTSLPTSTTSEGS 1277

Query: 335  RLSSS 349
             L +S
Sbjct: 1278 TLLTS 1282



 Score = 30.7 bits (66), Expect = 3.5
 Identities = 23/68 (33%), Positives = 33/68 (48%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTE 325
            S  +T   S+ V+ T ++S +A TLST    T    T   + S  P+TA    +PI T  
Sbjct: 2806 SETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSPTTAEGIVVPISTAS 2865

Query: 326  PGLRLSSS 349
             G  L +S
Sbjct: 2866 EGSTLLTS 2873



 Score = 30.3 bits (65), Expect = 4.6
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +2

Query: 146 SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTE 325
           S  +T   S+ V  T L+S +A+TLST    T    T     S  P+T     +PI T  
Sbjct: 743 SEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEGTSMPISTPS 802

Query: 326 PGLRLSSS 349
            G  L +S
Sbjct: 803 EGSPLLTS 810



 Score = 29.9 bits (64), Expect = 6.1
 Identities = 24/68 (35%), Positives = 30/68 (44%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYTTE 325
            S  TT   S+ V  T + S +A TLST    T    T     S  P+TA    +PI T  
Sbjct: 2452 SEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVVPISTAS 2511

Query: 326  PGLRLSSS 349
             G  L +S
Sbjct: 2512 EGSTLLTS 2519



 Score = 29.9 bits (64), Expect = 6.1
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = +2

Query: 146  SSNTTQAYSIRVDGTALSSYQATTLSTRCG*TYIWTTILRRLSPQPSTAGHRPLPIYT 319
            S  +T   S+ V    L+S +A+TLST    T I  T     S  P+TA    +PI T
Sbjct: 2570 SEGSTPLRSMPVSTKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSMPIST 2627


>AK055513-1|BAB70939.1|  131|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30951 fis, clone HCASM1000115. ).
          Length = 131

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = +3

Query: 300 GLSQSTPLSPVCGSPHPLLAGHRVEVIAPSSQGATH 407
           G +QS+  SP  G P PL A HR   +APS   A H
Sbjct: 66  GHAQSS--SPAEGKPRPLAAVHRCWPLAPSRSTACH 99


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,801,898
Number of Sequences: 237096
Number of extensions: 1989844
Number of successful extensions: 8283
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8283
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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