BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1007 (547 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U23948-1|AAA82593.1| 486|Drosophila melanogaster malvolio protein. 29 5.4 BT015996-1|AAV36881.2| 596|Drosophila melanogaster RE49741p pro... 29 5.4 AY058543-1|AAL13772.1| 596|Drosophila melanogaster LD24465p pro... 29 5.4 AE014297-2916|AAS65187.1| 486|Drosophila melanogaster CG3671-PC... 29 5.4 AE014297-2915|AAN13847.1| 596|Drosophila melanogaster CG3671-PB... 29 5.4 AE014297-2914|AAF55839.2| 596|Drosophila melanogaster CG3671-PA... 29 5.4 >U23948-1|AAA82593.1| 486|Drosophila melanogaster malvolio protein. Length = 486 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 59 IVVSLHCCSYCWCQLKRRRSPRWCLRALVSSNTTQAYSIRVDGTALSSY 205 +V LH C+ Q K R PRW L ++ + V GTA++ Y Sbjct: 134 VVTGLHLAEMCYRQYK--RLPRWILWIMIEIAIIGSDMQEVIGTAIAIY 180 >BT015996-1|AAV36881.2| 596|Drosophila melanogaster RE49741p protein. Length = 596 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 59 IVVSLHCCSYCWCQLKRRRSPRWCLRALVSSNTTQAYSIRVDGTALSSY 205 +V LH C+ Q K R PRW L ++ + V GTA++ Y Sbjct: 134 VVTGLHLAEMCYRQYK--RLPRWILWIMIEIAIIGSDMQEVIGTAIAIY 180 >AY058543-1|AAL13772.1| 596|Drosophila melanogaster LD24465p protein. Length = 596 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 59 IVVSLHCCSYCWCQLKRRRSPRWCLRALVSSNTTQAYSIRVDGTALSSY 205 +V LH C+ Q K R PRW L ++ + V GTA++ Y Sbjct: 134 VVTGLHLAEMCYRQYK--RLPRWILWIMIEIAIIGSDMQEVIGTAIAIY 180 >AE014297-2916|AAS65187.1| 486|Drosophila melanogaster CG3671-PC, isoform C protein. Length = 486 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 59 IVVSLHCCSYCWCQLKRRRSPRWCLRALVSSNTTQAYSIRVDGTALSSY 205 +V LH C+ Q K R PRW L ++ + V GTA++ Y Sbjct: 134 VVTGLHLAEMCYRQYK--RLPRWILWIMIEIAIIGSDMQEVIGTAIAIY 180 >AE014297-2915|AAN13847.1| 596|Drosophila melanogaster CG3671-PB, isoform B protein. Length = 596 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 59 IVVSLHCCSYCWCQLKRRRSPRWCLRALVSSNTTQAYSIRVDGTALSSY 205 +V LH C+ Q K R PRW L ++ + V GTA++ Y Sbjct: 134 VVTGLHLAEMCYRQYK--RLPRWILWIMIEIAIIGSDMQEVIGTAIAIY 180 >AE014297-2914|AAF55839.2| 596|Drosophila melanogaster CG3671-PA, isoform A protein. Length = 596 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +2 Query: 59 IVVSLHCCSYCWCQLKRRRSPRWCLRALVSSNTTQAYSIRVDGTALSSY 205 +V LH C+ Q K R PRW L ++ + V GTA++ Y Sbjct: 134 VVTGLHLAEMCYRQYK--RLPRWILWIMIEIAIIGSDMQEVIGTAIAIY 180 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,242,210 Number of Sequences: 53049 Number of extensions: 563457 Number of successful extensions: 1343 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1343 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2069139900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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