BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1003 (641 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 76 2e-14 SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 73 2e-13 SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 66 2e-11 SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 66 2e-11 SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 64 7e-11 SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11 SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 62 3e-10 SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 62 5e-10 SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 45 5e-05 SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06) 37 0.012 SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 31 0.60 SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 30 1.4 SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4 SB_45117| Best HMM Match : Band_41 (HMM E-Value=7.4e-26) 28 7.4 SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043) 28 7.4 SB_75| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4 SB_54295| Best HMM Match : RVP (HMM E-Value=0.037) 28 7.4 SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 28 7.4 SB_26250| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4 SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8 SB_50579| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8 SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 27 9.8 SB_22731| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8 >SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) Length = 185 Score = 76.2 bits (179), Expect = 2e-14 Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 1/93 (1%) Frame = +1 Query: 169 DKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCT 345 D DKFQ+ LDV+ F PEEI+ K +G I V G + ++ G+ S++F R Y LPEG Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60 Query: 346 AESVESRLSSDGVLSVIAPRKVPPAVEGERKIP 444 S+ +R++ DG+L V A +K PPA E K P Sbjct: 61 ESSISTRIAEDGMLHVEALKKSPPATT-ENKAP 92 Score = 54.0 bits (124), Expect = 1e-07 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%) Frame = +1 Query: 169 DKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEGCT 345 D KF + LDV F PEE+ VK + V + E ++HG+ + RQF R + LP Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVD 153 Query: 346 AESVESRLSSDGVLSVIAPRK 408 +++ RL DGVL + A ++ Sbjct: 154 MDTLVPRLGKDGVLYIEADKR 174 >SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) Length = 210 Score = 72.9 bits (171), Expect = 2e-13 Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 1/94 (1%) Frame = +1 Query: 148 LGSSIKSDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 324 L ++ + + DK ++ LDV+++ PEEIS+K G I ++GKH+ + +HGY + +F R Y Sbjct: 29 LAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKSE-GEHGYETSEFHRSY 87 Query: 325 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVE 426 LP+G +V SR++ DG+L + A + P E Sbjct: 88 NLPDGVDVSTVSSRITGDGLLHIEALKAEPQETE 121 Score = 28.3 bits (60), Expect(2) = 0.062 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +1 Query: 316 RRYALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 447 R + LP+ +S+ SRL DG L + A R + P ER++ I Sbjct: 161 RHFVLPKDVDMDSLVSRLGKDGKLYIEAKRILHPTPH-ERQVNI 203 Score = 25.4 bits (53), Expect(2) = 0.062 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +1 Query: 127 LAAAARDLGSSIKSDKDKFQVNLDVQHFAPE 219 + A+ G K D +F V LDV F+P+ Sbjct: 125 VGASTGSAGDIAKIDDKRFTVTLDVSSFSPD 155 >SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) Length = 190 Score = 66.1 bits (154), Expect = 2e-11 Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 1/92 (1%) Frame = +1 Query: 166 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 342 ++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60 Query: 343 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 438 A +V++R+S+ G L + A + +P GE + Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEEE 92 Score = 55.6 bits (128), Expect = 3e-08 Identities = 29/101 (28%), Positives = 50/101 (49%) Frame = +1 Query: 145 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 324 D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145 Query: 325 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 447 LP +S+ +RL +G L A ++ PA+ R++ + Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 186 >SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) Length = 190 Score = 66.1 bits (154), Expect = 2e-11 Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 1/92 (1%) Frame = +1 Query: 166 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 342 ++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R +ALPEG Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGV 60 Query: 343 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 438 A +V++R+S+ G L + A + +P GE + Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEEE 92 Score = 55.6 bits (128), Expect = 3e-08 Identities = 29/101 (28%), Positives = 50/101 (49%) Frame = +1 Query: 145 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 324 D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145 Query: 325 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 447 LP +S+ +RL +G L A ++ PA+ R++ + Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 186 >SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) Length = 424 Score = 64.5 bits (150), Expect = 7e-11 Identities = 31/92 (33%), Positives = 58/92 (63%), Gaps = 1/92 (1%) Frame = +1 Query: 166 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 342 ++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60 Query: 343 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 438 A +V++R+S+ G L + A + +P GE + Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEEE 92 Score = 63.7 bits (148), Expect = 1e-10 Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%) Frame = +1 Query: 175 DKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAE 351 D+ ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG A Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEAS 297 Query: 352 SVESRLSSDGVLSVIAPRKVPPAVEGERK 438 +V++R+S+ G L + A + +P GE + Sbjct: 298 NVKTRISNHGQLHIEAMKALPGPDGGEEE 326 Score = 55.6 bits (128), Expect = 3e-08 Identities = 29/101 (28%), Positives = 50/101 (49%) Frame = +1 Query: 145 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 324 D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ Sbjct: 321 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 379 Query: 325 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 447 LP +S+ +RL +G L A ++ PA+ R++ + Sbjct: 380 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 420 Score = 55.2 bits (127), Expect = 4e-08 Identities = 29/101 (28%), Positives = 50/101 (49%) Frame = +1 Query: 145 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 324 D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145 Query: 325 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 447 LP +S+ +RL +G L A ++ PA+ R++ + Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKL 186 >SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 760 Score = 64.5 bits (150), Expect = 7e-11 Identities = 31/92 (33%), Positives = 58/92 (63%), Gaps = 1/92 (1%) Frame = +1 Query: 166 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 342 ++++K ++ LDV+ + PEEIS K +G++ V+G+H + G+ ++F R + LPEG Sbjct: 2 ANENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 60 Query: 343 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 438 A +V++R+S+ G L + A + +P GE + Sbjct: 61 EASNVKTRISNHGQLHIEAMKALPGPDGGEEE 92 Score = 55.6 bits (128), Expect = 3e-08 Identities = 29/101 (28%), Positives = 50/101 (49%) Frame = +1 Query: 145 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 324 D G DKF + +DV F P+ I V+ ++V HE + + H Y + F R++ Sbjct: 87 DGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQF 145 Query: 325 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 447 LP +S+ +RL +G L A ++ PA+ R++ + Sbjct: 146 VLPREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 186 >SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) Length = 189 Score = 62.5 bits (145), Expect = 3e-10 Identities = 33/80 (41%), Positives = 49/80 (61%) Frame = +1 Query: 193 LDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLS 372 LDV+ + PEEIS K +G + V+G+H + + G+ ++F R + LPEG E+V SR+S Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGIDPENVTSRIS 70 Query: 373 SDGVLSVIAPRKVPPAVEGE 432 + G L + A RK P E E Sbjct: 71 NHGHLHIEA-RKALPKPEAE 89 Score = 59.7 bits (138), Expect = 2e-09 Identities = 30/95 (31%), Positives = 51/95 (53%) Frame = +1 Query: 163 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 342 K+ +DKF + +DV F PE I V+ ++V HE + + H Y + F R++ LP Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150 Query: 343 TAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 447 +S+ +RL +G L A + V PA+ R++ + Sbjct: 151 DMDSLTTRLDKEGKLHFEAKKSVAPALPPVRELMV 185 >SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) Length = 695 Score = 61.7 bits (143), Expect = 5e-10 Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 1/92 (1%) Frame = +1 Query: 166 SDKDKFQV-NLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 342 ++++K ++ LDV+ + PEEIS K +G + V+G+H + G+ ++F R + LPEG Sbjct: 3 NNENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGV 61 Query: 343 TAESVESRLSSDGVLSVIAPRKVPPAVEGERK 438 A +V++R+S+ G L + A K P +G +K Sbjct: 62 EASNVKTRISNHGQLHIEA-MKALPEPDGAKK 92 Score = 58.4 bits (135), Expect = 5e-09 Identities = 30/99 (30%), Positives = 53/99 (53%) Frame = +1 Query: 151 GSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYAL 330 G+ +S DKF + +DV+ F PE I V+ ++V HE + + H Y + F R++ L Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147 Query: 331 PEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPI 447 P +S+ +RL +G L A ++ PA+ R++ + Sbjct: 148 PREVDMDSLTTRLDKEGKLHFEAKKRNAPALPPVRELKV 186 >SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) Length = 259 Score = 45.2 bits (102), Expect = 5e-05 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +1 Query: 136 AARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYI-SRQF 312 A ++ S+ D KF + LDV F PEE+ VK + V + E ++HG+ +RQF Sbjct: 13 ATKENQSAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQF 70 Query: 313 TRRYALPE 336 R + LP+ Sbjct: 71 NRHFVLPQ 78 >SB_6186| Best HMM Match : HSP20 (HMM E-Value=1.1e-06) Length = 237 Score = 37.1 bits (82), Expect = 0.012 Identities = 19/83 (22%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = +1 Query: 163 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYIS-RQFTRRYALPEG 339 ++DK+ ++ ++V+ FA +++S++ ++++G+ +K D G+ RQF R P+ Sbjct: 94 QNDKNGIKLEMNVRGFAAKDVSLQVDGQDLIIKGEKMDKDD--GWCKMRQFCWRRRFPKS 151 Query: 340 CTAESVESRLSSDGVLSVIAPRK 408 +S+++ L +L + A ++ Sbjct: 152 TDMKSIKATLKYGDILEIEAQKE 174 >SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) Length = 436 Score = 31.5 bits (68), Expect = 0.60 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +1 Query: 265 KHEEKKDQHGYISRQFTRRYAL 330 KHEE++D+HGY+ + T ++AL Sbjct: 72 KHEEREDRHGYLKDKVTLQHAL 93 >SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) Length = 385 Score = 30.3 bits (65), Expect = 1.4 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -2 Query: 496 RRWIGPSPPCARVRFGRSESCVHPPL--LAAPSWVRLQTTHHLKTAG 362 + W P P V FG + C+H P+ L A W+ QTT KT G Sbjct: 134 KSWSQPFP----VNFGVRQGCIHSPILFLVAIDWIMRQTTSD-KTRG 175 >SB_13144| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 266 Score = 30.3 bits (65), Expect = 1.4 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +1 Query: 229 VKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPE 336 +++A GY+V G H K + G + + R LP+ Sbjct: 10 IRSARGYVVTSGSHTSKSEVRGIMEETCSNRNPLPQ 45 >SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2492 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +1 Query: 397 APRKVPPAVEGERKIPIAQTGP 462 +PR V P V ER+I ++Q+GP Sbjct: 1384 SPRSVKPVVRSERRIKLSQSGP 1405 >SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 784 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -3 Query: 162 DAGAKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQ 46 D A V + S V+ FS H G+ CST + ++P+ Sbjct: 154 DVLAAVKTPVSPVSSNGTAFSEHGGSPCSTPTVSSAEPR 192 >SB_45117| Best HMM Match : Band_41 (HMM E-Value=7.4e-26) Length = 458 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +1 Query: 262 GKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPRKV--PPAVEGER 435 G ++ KK+ GY+ R+ +R + P G ++ + + ++ + + + PA G R Sbjct: 202 GDYDSKKNSKGYLVRENSRFFVPPNGLNSDGEINESDYEEIVKKMHKKLIGESPARAGNR 261 Query: 436 KIPIAQTGP 462 + A++ P Sbjct: 262 FLRAAESIP 270 >SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043) Length = 811 Score = 27.9 bits (59), Expect = 7.4 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +1 Query: 337 GCTAESVESRLSSDGVLSVIAPRKVPPA 420 G + +S+ES++ SDG ++P K PA Sbjct: 531 GSSPQSLESQVLSDGCTKTMSPNKTSPA 558 >SB_75| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 343 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 454 FGRSESCVHPPLLAAPSWVRLQTTHHLKTAGT 359 F R+ V+PP LA P W+ + H T GT Sbjct: 31 FTRTIGKVYPPTLANPDWIHYE-EHFKTTTGT 61 >SB_54295| Best HMM Match : RVP (HMM E-Value=0.037) Length = 239 Score = 27.9 bits (59), Expect = 7.4 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = +1 Query: 409 VPPAVEGERKIPIAQTGPVRKEVKD-QSNG 495 V P + RK+PI+ GPV++++ + + NG Sbjct: 156 VTPVIHPPRKLPISPLGPVKEKLSEMEQNG 185 >SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) Length = 3397 Score = 27.9 bits (59), Expect = 7.4 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Frame = +1 Query: 163 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRYALPEGC 342 KSD FQ+ Q P ++ K + E K+EE D+HG I R+ T+ Sbjct: 1162 KSDLSTFQITPISQ--IPSSLTEK-----LQPETKYEEYVDEHGQIIRRTTKVKHTAVKQ 1214 Query: 343 TAESVESRLSSDGVLSVIA-PRKVPPAVEGERKIPIAQTGPVR 468 +V ++ DGV + A + PP VE ++ + VR Sbjct: 1215 ERTTVTKTVTRDGVTTREANVIESPPEVESSTQVYRDEESSVR 1257 >SB_26250| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 292 Score = 27.9 bits (59), Expect = 7.4 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = -3 Query: 411 HLPGCDYRQHTI*RQPGLHRFSRTALRQSVATSELTRYVTMLIFLLLVFAFN 256 H YR H + R+P H +R + + + +T L++ ++AFN Sbjct: 204 HFERVPYRNHQVLREPARH-VTRFIALSYIGNPQKKKILTELLYFQYMYAFN 254 >SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3213 Score = 27.5 bits (58), Expect = 9.8 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = +1 Query: 157 SIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEE-----KKDQHGYISRQFTRR 321 +I S +DK + + HFA E+ V+ YI E E +K Q +QF + Sbjct: 1368 AIDSVRDKGEQLISCGHFAASEVEVRIEALYIQWEELLEASATKGRKLQEARDHQQFNQE 1427 Query: 322 YALPEGCTAESVESRLSSD 378 + + C + LSSD Sbjct: 1428 VDIADSCITDKETIVLSSD 1446 >SB_50579| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 488 Score = 27.5 bits (58), Expect = 9.8 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +3 Query: 108 LPPVASPCCRGSRPWLQHQK 167 L P SPCC+ + W+Q+ K Sbjct: 296 LKPTMSPCCKTTTTWVQNLK 315 >SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) Length = 829 Score = 27.5 bits (58), Expect = 9.8 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = -3 Query: 354 RFSRTALRQSVATSELTRYVTMLIFLLLVFAFNHDVAVRRFNRDF-FRGEML 202 RF+ + S + L Y +L+F ++F +N +FNR F F+ E++ Sbjct: 303 RFTCYNVLSSYFSVTLCIYYILLVFCAVIFVYNCAWTYTKFNRPFDFKKELM 354 >SB_22731| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 56 Score = 27.5 bits (58), Expect = 9.8 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -2 Query: 400 VRLQTTHHLKTAGTPQIQPYSP 335 VR +T HH K P I+PY P Sbjct: 29 VRERTGHHKKCGALPSIKPYLP 50 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,903,507 Number of Sequences: 59808 Number of extensions: 491333 Number of successful extensions: 1404 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1224 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1397 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1620947750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -