Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1003
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   134   3e-33
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   1.2  
AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.            23   6.2  
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            23   6.2  
AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.            23   6.2  
AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive ...    23   6.2  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.2  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.2  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   8.2  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  134 bits (323), Expect = 3e-33
 Identities = 62/111 (55%), Positives = 76/111 (68%)
 Frame = +1

Query: 145 DLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQHGYISRQFTRRY 324
           D GS++   KDKFQ+NLDVQ F+PEEISVK  D  ++VEGKHEEK+D HGY+SR F RRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 325 ALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIPIAQTGPVRKEV 477
            LP+G     + S LSSDG+L++  PRK       ER IPI  TG   K+V
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQV 113


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 457 RFGRSESCVHPPLLAAPSWVRLQTTHHLKTA 365
           +FG    CV+   ++ P W R  T H+L  A
Sbjct: 113 QFGEGRECVNCGAISTPLWRRDGTGHYLCNA 143


>AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 485 WSFTSLRTGPVWAIGILRSP 426
           W  T     PV+ +GI++ P
Sbjct: 152 WHLTGFSIDPVYGLGIIKQP 171


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 485 WSFTSLRTGPVWAIGILRSP 426
           W  T     PV+ +GI++ P
Sbjct: 152 WHLTGFSIDPVYGLGIIKQP 171


>AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 485 WSFTSLRTGPVWAIGILRSP 426
           W  T     PV+ +GI++ P
Sbjct: 152 WHLTGFSIDPVYGLGIIKQP 171


>AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive
           alpha-macroglobulinand complement C3-related protein
           IMCR14 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 485 WSFTSLRTGPVWAIGILRSP 426
           W  T     PV+ +GI++ P
Sbjct: 81  WHLTGFSIDPVYGLGIIKQP 100


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 295 YISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAP 402
           Y+S +F     +P+GC    +   L  + V +V+ P
Sbjct: 661 YLSEEFFCTSGVPQGCVLSPLLFSLFINDVCNVLPP 696


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -2

Query: 172 CHF*CWSQGLEPRQQGDATGGSILCSQG 89
           C   CW +G    Q+      S  CSQG
Sbjct: 164 CEVGCWGEGAHNCQRFSKLNCSPQCSQG 191


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 485 WSFTSLRTGPVWAIGILRSP 426
           W  T     PV+ +GI++ P
Sbjct: 659 WYLTGFSIDPVYGLGIIKKP 678


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,046
Number of Sequences: 2352
Number of extensions: 14155
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)