Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1001
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    36   0.001
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    30   0.081
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    29   0.11 
U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    25   3.0  
Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein...    23   9.2  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    23   9.2  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 36.3 bits (80), Expect = 0.001
 Identities = 20/86 (23%), Positives = 45/86 (52%)
 Frame = -3

Query: 693 QSWLETNVSDLIRAEDWPSSSPDLNPLDYDI*SVLESTACSKRHDNLESLKQSVRLAVTN 514
           Q+WL  N    ++   WP+ SPDLNP++ ++ ++ +        ++L+ L   ++   + 
Sbjct: 165 QTWLADNN---VKTMKWPALSPDLNPIE-NLWAIFKKRLGKNIPEDLDHLFDHMQEVWSK 220

Query: 513 FPMERVRASIDNWPQRLKDCIAANGD 436
            P E ++  + +  QR+ + I  +G+
Sbjct: 221 IPPETIQNLVMSMRQRMINVIVGDGN 246


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 0.081
 Identities = 18/73 (24%), Positives = 34/73 (46%)
 Frame = -3

Query: 645 WPSSSPDLNPLDYDI*SVLESTACSKRHDNLESLKQSVRLAVTNFPMERVRASIDNWPQR 466
           WP+ SPDLNP++ ++ S L+    ++   + + L    +           R  I +  +R
Sbjct: 260 WPALSPDLNPIE-NLWSTLKRQLKNQPARSADDLWTRCKFMWERIDRSESRNLIGDMAKR 318

Query: 465 LKDCIAANGDHFE 427
            ++ IA NG   +
Sbjct: 319 CQEVIANNGHQID 331


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 18/73 (24%), Positives = 32/73 (43%)
 Frame = -3

Query: 645 WPSSSPDLNPLDYDI*SVLESTACSKRHDNLESLKQSVRLAVTNFPMERVRASIDNWPQR 466
           WP+ SPDLNP++ ++ S L+    ++   + + L                R  I +   R
Sbjct: 188 WPALSPDLNPIE-NLWSTLKRHVKNQPARSADDLWTRCEAMWKRIDRSECRNLIGDMALR 246

Query: 465 LKDCIAANGDHFE 427
            ++ I  NG H +
Sbjct: 247 CEEVIVNNGHHID 259


>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 89

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 672 VSDLIRAEDWPSSSPDLNPLD 610
           V   I   +W + SPDLNP++
Sbjct: 69  VDHKIDVMNWTAQSPDLNPIE 89


>Y17699-1|CAA76819.1|   81|Anopheles gambiae hypothetical protein
           protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 660 IRAEDWPSSSPDLNPLDY 607
           +  +D P   PD++P+D+
Sbjct: 46  VEKDDSPKDKPDIDPVDF 63


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 149 NNFVCPLMCPPSD 111
           NNFV P+  PP D
Sbjct: 236 NNFVSPVCLPPDD 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,123
Number of Sequences: 2352
Number of extensions: 12698
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)