BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-1001 (698 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U33463-1|AAC47095.1| 345|Drosophila melanogaster transposase pr... 31 1.1 AY118838-1|AAM50698.1| 202|Drosophila melanogaster GM12182p pro... 29 6.1 AE014297-4421|AAF56924.1| 202|Drosophila melanogaster CG7593-PA... 29 6.1 >U33463-1|AAC47095.1| 345|Drosophila melanogaster transposase protein. Length = 345 Score = 31.5 bits (68), Expect = 1.1 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Frame = -3 Query: 693 QSWLETNVSDLIRAEDWPSSSPDLNPLDYDI*SVLESTACSKRHDNLESLKQSVRLAVTN 514 ++WL N +I D P SPDLNP++ ++ + L+ + + L ++ Sbjct: 259 RNWLLYNCGKVI---DTPPQSPDLNPIE-NLWAYLKKKVAKRGPKTRQQLMAAIIEEWEK 314 Query: 513 FPME-RVRASIDNWPQRLKDCIAANGDH 433 P+E ++ I + +RL+ ANG H Sbjct: 315 IPLEYDLKKLIHSMKKRLQLVAKANGGH 342 >AY118838-1|AAM50698.1| 202|Drosophila melanogaster GM12182p protein. Length = 202 Score = 29.1 bits (62), Expect = 6.1 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 476 QLSIEARTLSMGKFVTANLTDCFRDSKLSWRLEQAVLS 589 Q++ E R +GKF+ + L DC R W LE+ +L+ Sbjct: 128 QVAAEYRRKGLGKFIMSTLEDCAR----LWHLEKVMLT 161 >AE014297-4421|AAF56924.1| 202|Drosophila melanogaster CG7593-PA protein. Length = 202 Score = 29.1 bits (62), Expect = 6.1 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 476 QLSIEARTLSMGKFVTANLTDCFRDSKLSWRLEQAVLS 589 Q++ E R +GKF+ + L DC R W LE+ +L+ Sbjct: 128 QVAAEYRRKGLGKFIMSTLEDCAR----LWHLEKVMLT 161 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,734,163 Number of Sequences: 53049 Number of extensions: 521009 Number of successful extensions: 727 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 718 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 727 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3067209849 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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