Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-1000
         (496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    25   1.4  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   7.6  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    22   10.0 

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 105 NIIFHFLIFVIKTNSLTYT*TR-GFR-WA*KENGVC 206
           NI+F  L + +   S+TYT  R G   W  K  G C
Sbjct: 246 NIVFMLLTYFLPIGSMTYTYARVGLELWGSKSIGEC 281


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = -3

Query: 248 NCALDSQSRFLFNVAHAIFFLRPTKSSGLRICQRICFNYEYKKMKNNIKPHTGNT 84
           NC L+ +++ +      + +  P      +IC R      Y++++++I   T NT
Sbjct: 365 NCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARC-YEQIRSSI-AFTANT 417


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = -3

Query: 248 NCALDSQSRFLFNVAHAIFFLRPTKSSGLRICQRICFNYEYKKMKNNIKPHTGNT 84
           NC L+ +++ +      + +  P      +IC R      Y++++++I   T NT
Sbjct: 365 NCELECEAKLILENCGCVLYYLPKLYEDTKICSRANARC-YEQIRSSI-AFTANT 417


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 305 PGLVLGLAANGEHLLLFVGN 246
           PG  +GLAA  + LLLF  N
Sbjct: 541 PGAYVGLAAYDKALLLFNKN 560


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,893
Number of Sequences: 2352
Number of extensions: 10175
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)