Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-1000
(496 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 25 0.44
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 25 0.44
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 1.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 1.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 1.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 1.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 1.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 1.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 1.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 1.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 1.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 1.3
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 23 1.8
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 23 1.8
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 2.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 2.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.5
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 25.0 bits (52), Expect = 0.44
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 86 YYLYGA*YYFSFSYIRN 136
YY YGA + F+F++I+N
Sbjct: 297 YYDYGADFPFNFAFIKN 313
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 25.0 bits (52), Expect = 0.44
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 86 YYLYGA*YYFSFSYIRN 136
YY YGA + F+F++I+N
Sbjct: 297 YYDYGADFPFNFAFIKN 313
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 75 KSKEPKIISSLSNNYNYNNYNNNYKP 100
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 75 KSKEPKIISSLSNNYNYNNYNNNYKP 100
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 75 KSKEPKIISSLSNNYNYNNYNNNYKP 100
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 75 KSKEPKIISSLSNNYNYNNYNNNYKP 100
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 308 KSKEPKIISSLSNNYNYNNYNNNYKP 333
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 308 KSKEPKIISSLSNNYNYNNYNNNYKP 333
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 308 KSKEPKIISSLSNNYNYNNYNNNYKP 333
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 308 KSKEPKIISSLSNNYNYNNYNNNYKP 333
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 308 KSKEPKIISSLSNNYNYNNYNNNYKP 333
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 176 KSSGLRICQRICFNYEYKKMKNNIKP 99
KS +I + NY Y NN KP
Sbjct: 297 KSKEPKIISSLSNNYNYNNYNNNYKP 322
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 347 DSPNEDGFDSDVFNPGLVLGL 285
D E+G S+ +PGLV G+
Sbjct: 116 DGDEENGLTSESTDPGLVAGI 136
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 347 DSPNEDGFDSDVFNPGLVLGL 285
D E+G S+ +PGLV G+
Sbjct: 87 DGDEENGLTSESTDPGLVAGI 107
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 48 YCNLKTNCIFFSCI 89
YCN KTN +SC+
Sbjct: 218 YCNSKTNTGEYSCL 231
Score = 21.4 bits (43), Expect = 5.4
Identities = 4/10 (40%), Positives = 9/10 (90%)
Frame = +3
Query: 453 CCIMLIIKWI 482
CC+++I+ W+
Sbjct: 252 CCMLVIVSWV 261
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 48 YCNLKTNCIFFSCI 89
YCN KTN +SC+
Sbjct: 218 YCNSKTNTGEYSCL 231
Score = 21.4 bits (43), Expect = 5.4
Identities = 4/10 (40%), Positives = 9/10 (90%)
Frame = +3
Query: 453 CCIMLIIKWI 482
CC+++I+ W+
Sbjct: 252 CCMLVIVSWV 261
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 143 CFNYEYKKMKNNI 105
C N EY+ MK+N+
Sbjct: 206 CSNQEYEIMKDNL 218
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,284
Number of Sequences: 438
Number of extensions: 3069
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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