Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0995
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   1.9  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   3.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   5.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   5.8  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = -3

Query: 497 RTASSCQR---RRGTPACTCP*RRS*APGSGKYLMTLAKLPRQNERRPCS 357
           R+   CQ    R  + +  CP  +   PG  K++    K P +   RPC+
Sbjct: 85  RSCMCCQESGEREASVSLFCPKAK---PGERKFIKVTTKAPLECMCRPCT 131


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 88  VIPHPRVPQLPPRHIHL 138
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 88  VIPHPRVPQLPPRHIHL 138
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 88  VIPHPRVPQLPPRHIHL 138
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 91  IPHPRVPQLPP 123
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 91  IPHPRVPQLPP 123
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,488
Number of Sequences: 336
Number of extensions: 2491
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)