Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0995
(583 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 89 6e-19
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 60 3e-10
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 51 1e-07
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 44 2e-05
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 38 0.001
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 37 0.002
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 37 0.002
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 36 0.004
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 34 0.013
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 34 0.017
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 32 0.070
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.21
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 27 2.6
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 27 2.6
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 3.5
SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|... 26 4.6
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 4.6
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 25 6.1
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 8.1
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 8.1
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 88.6 bits (210), Expect = 6e-19
Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = +1
Query: 190 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 366
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 367 LLSFWRGNFANVIRYLP 417
++S WRGN ANV+RY P
Sbjct: 87 VISLWRGNTANVLRYFP 103
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +2
Query: 422 QALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFAR 583
QALNFAFKDK+K++F G ++ + ++F SL FVY LD+AR
Sbjct: 105 QALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYAR 157
Score = 32.3 bits (70), Expect = 0.053
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +1
Query: 190 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 369
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 370 LSFWRGNFANVI 405
+RG +V+
Sbjct: 192 RGLYRGFGPSVV 203
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 59.7 bits (138), Expect = 3e-10
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 385 GNFANVIRYLP 417
GN N +R P
Sbjct: 78 GNGTNCLRAFP 88
Score = 42.7 bits (96), Expect = 4e-05
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +1
Query: 160 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 339
K + AD AF K FL GG + + +T P + ++ QV + YK I A
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 340 FVRIPKEQGLLSFWRGNFANVIRYLP 417
I K +G+ F+RG +N+++ +P
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLKIIP 298
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 50.8 bits (116), Expect = 1e-07
Identities = 30/87 (34%), Positives = 46/87 (52%)
Frame = +1
Query: 196 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 375
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 376 FWRGNFANVIRYLPDPGAQLRLQGQVQ 456
++G+ A + R P G + QV+
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVR 104
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 43.6 bits (98), Expect = 2e-05
Identities = 22/81 (27%), Positives = 44/81 (54%)
Frame = +1
Query: 178 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPK 357
DP F++GGI+ VS+T AP++R+K++L + + + + ++ +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 358 EQGLLSFWRGNFANVIRYLPD 420
G+ SF+ GN NV++ +P+
Sbjct: 182 RNGIRSFFVGNGINVLKVMPE 202
Score = 37.9 bits (84), Expect = 0.001
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 211 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 390
G +S + T V P+ ++ LQ Q S A Y G +D F + K +G ++G
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGL 398
Query: 391 FANVIRYLP 417
N+++ P
Sbjct: 399 SPNLLKVAP 407
Score = 31.5 bits (68), Expect = 0.093
Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 202 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQGLLSF 378
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ + + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 379 WRGNFANVIRYLP 417
+RG ++ P
Sbjct: 288 YRGVLVGILGMFP 300
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.9 bits (84), Expect = 0.001
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 187 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 363
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 364 GLLSFWRG 387
GL +F++G
Sbjct: 70 GLAAFYKG 77
Score = 34.7 bits (76), Expect = 0.010
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 181 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKE 360
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 361 QGLLSFWRG 387
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 36.7 bits (81), Expect = 0.002
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 385 GNFANVIRYLP 417
G ++ +P
Sbjct: 268 GIRPRMVVAMP 278
Score = 34.3 bits (75), Expect = 0.013
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 381
LAG S + + + P++ +K +Q+ + VS+ ++ + IV++ ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 382 RG 387
RG
Sbjct: 79 RG 80
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 36.7 bits (81), Expect = 0.002
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 202 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 378
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 379 WRG 387
RG
Sbjct: 87 QRG 89
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 35.9 bits (79), Expect = 0.004
Identities = 20/75 (26%), Positives = 34/75 (45%)
Frame = +1
Query: 202 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 381
FL G ++ ++ PI+ VK +Q ++A + YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 382 RGNFANVIRYLPDPG 426
G + R + G
Sbjct: 261 SGATPRLARLILSGG 275
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 34.3 bits (75), Expect = 0.013
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 193 AKDFLAGGISAAVSKTAVAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGL 369
A L G + V P E +K+ LQ V++ SK Y G VD F +I K++ +
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERI 157
Query: 370 LSFWRGNFANVIRYL 414
L+ + G A + R++
Sbjct: 158 LALYNGFEATMWRHV 172
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 33.9 bits (74), Expect = 0.017
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 385 GNFANVIRYL 414
GN + YL
Sbjct: 70 GNVVAELLYL 79
Score = 29.1 bits (62), Expect = 0.50
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 385 GNFANVIRYLP 417
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 31.9 bits (69), Expect = 0.070
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 196 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR---YKGIVDAFVRIPKEQG 366
KD +AGG + S VAP++ VK Q Q + G + + I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 367 LLSFWRGNFANVIRYLP 417
+ +RG ++ YLP
Sbjct: 67 IAGLYRGVGPMMLGYLP 83
Score = 28.7 bits (61), Expect = 0.65
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 304 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 402
A Y DAF +I K +GL +F+RG F ++
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.21
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 139 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 279
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
Score = 29.9 bits (64), Expect = 0.28
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 214 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNF 393
GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ + G
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336
Query: 394 ANVIRYLPD 420
A+++R +P+
Sbjct: 337 AHLLRVVPN 345
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 447 SLKAKLSAWVGQVPDDVGEVTTPE 376
+L+AK+S+ + +V DDVGE+ E
Sbjct: 741 TLEAKISSTLSKVRDDVGEICMDE 764
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 2.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 394 ANVIRYLPDPGAQLRLQGQVQAG 462
A VIR LPD +LR +G+ + G
Sbjct: 207 AEVIRTLPDGSCKLRFEGEEEVG 229
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 39 YEITPNLLFKNQELVFRDPPSACAATPTSTY 131
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPCC962.03c |cut15||karyopherin Cut15|Schizosaccharomyces pombe|chr
3|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 403 IRYLPDPGAQLRLQGQVQAGVPRR 474
I YL D GA ++Q + AG+PRR
Sbjct: 272 ISYLSD-GANEKIQAIIDAGIPRR 294
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 4.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 344 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 237
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 6.1
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQV--QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSF 378
+AG + +S T V+PIE + +Q H A + + + D + ++G+L+
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANE-VFDGLKLMIHQKGILNL 199
Query: 379 WRGNFANVIRYLP 417
W G + R +P
Sbjct: 200 WSGVSVTLWRDVP 212
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 8.1
Identities = 19/84 (22%), Positives = 33/84 (39%)
Frame = +1
Query: 160 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDA 339
K L P + L G ++ + +A+ P++ +K QV Y G +
Sbjct: 13 KTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAG 64
Query: 340 FVRIPKEQGLLSFWRGNFANVIRY 411
F I ++GL + G +I Y
Sbjct: 65 FKTILSKEGLRGLYTGGMPTLIGY 88
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 328 IVDAFVRIPKEQGLLSFWRGNFANVIRYLP 417
+++ + + +GL F+RG + V YLP
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLP 148
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,157,888
Number of Sequences: 5004
Number of extensions: 39335
Number of successful extensions: 150
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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