Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0995
(583 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 62 4e-10
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 52 5e-07
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 45 5e-05
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 45 5e-05
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 41 6e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 40 0.002
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.003
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.003
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.005
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.008
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 36 0.018
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.024
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.024
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.032
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 35 0.042
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.042
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 35 0.042
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 35 0.042
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 32 0.30
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 32 0.39
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 32 0.39
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 31 0.52
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 31 0.69
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.91
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.6
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.6
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.1
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.7
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 4.8
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 28 6.4
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 28 6.4
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 8.5
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 27 8.5
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 8.5
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 84.6 bits (200), Expect = 5e-17
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +1
Query: 190 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 366
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 367 LLSFWRGNFANVIRYLPDPGAQLRLQGQVQA 459
LSFWRGN AN IRY P + QV+A
Sbjct: 69 FLSFWRGNLANCIRYFPTQALNFAFKDQVKA 99
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 316 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYLPDPG 426
+YKG +D ++I K++G +S +G AN++R + G
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAG 284
Score = 31.5 bits (68), Expect = 0.52
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 422 QALNFAFKDKYKQVFLGGVDKKTQFWRY-FXXXXXXXXXXXXTSLCFVYPLDFAR 583
QALNFAFKD+ K +F KKT F SL FVY LD+ R
Sbjct: 87 QALNFAFKDQVKALF---KPKKTDSNAIKFSKNIASGGAAGAMSLFFVYSLDYCR 138
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/71 (19%), Positives = 36/71 (50%)
Frame = +1
Query: 175 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP 354
++ + F+K+ +GG + A+S V ++ + L + ++++ G++D + +
Sbjct: 108 SNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTI 167
Query: 355 KEQGLLSFWRG 387
GL+ +RG
Sbjct: 168 ASDGLVGLYRG 178
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 75.8 bits (178), Expect = 2e-14
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = +1
Query: 196 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 375
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89
Query: 376 FWRGNFANVIRYLPDPGAQLRLQGQVQAGV 465
+++GN NVIR P Q + + G+
Sbjct: 90 YFKGNGTNVIRIFPYSAVQFAAYEEYKKGI 119
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/72 (47%), Positives = 45/72 (62%)
Frame = +1
Query: 211 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 390
GG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 391 FANVIRYLPDPG 426
ANVI+ P+ G
Sbjct: 197 GANVIKIAPESG 208
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/77 (28%), Positives = 44/77 (57%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
LAG ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+R
Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287
Query: 385 GNFANVIRYLPDPGAQL 435
G F +++ +P G L
Sbjct: 288 GLFPSLLGIIPYAGIDL 304
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 61.7 bits (143), Expect = 4e-10
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 163 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 339
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 340 FVRIPKEQGLLSFWR 384
+R + +G+ SFWR
Sbjct: 61 TMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/94 (27%), Positives = 48/94 (51%)
Frame = +1
Query: 184 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 363
+ + + FL GG SA ++++ +P+E VK+L QV + G++ F + K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 364 GLLSFWRGNFANVIRYLPDPGAQLRLQGQVQAGV 465
G+ +FW+GN + IR P Q ++ A +
Sbjct: 109 GIKAFWKGNGVSCIRLFPYSAVQYAAFNRIVASL 142
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
LAG S ++ V P E +K L VQHV+K ++ YKG+ A I +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEGILALYK 213
Query: 385 GNFANVIRYLPDPG 426
G + + P G
Sbjct: 214 GVTPSFLGLFPFAG 227
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/70 (30%), Positives = 40/70 (57%)
Frame = +1
Query: 208 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 387
AG ++ +AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++G
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQG 97
Query: 388 NFANVIRYLP 417
N +R +P
Sbjct: 98 NTVTAVRDIP 107
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +1
Query: 166 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFV 345
SNL A +AGG + VS + P + +K +Q + RYKG++D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 346 RIPKEQGLLSFWRGNFANVIR 408
+ KE+G++ F RG + ++R
Sbjct: 180 QSYKEEGMIVFTRGIWPTLLR 200
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 44.8 bits (101), Expect = 5e-05
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Frame = +1
Query: 178 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGI 330
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 331 VDAFVRIPKEQGLLSFWRGNFANVIRYLPDPGAQLRLQGQVQA 459
+ V + K +G+ + ++G + R L ++ L QV+A
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKA 112
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 160 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 330
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 331 VDAFVRIPKEQGLLSFWRG 387
D F I KE+G + ++G
Sbjct: 79 KDCFRTILKEEGAMGLFKG 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
L G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 482
Query: 385 G 387
G
Sbjct: 483 G 483
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +1
Query: 217 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 396
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 397 NVIRYLPDPGAQL 435
++ P+ +L
Sbjct: 980 QLLGVSPEKAIKL 992
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/92 (28%), Positives = 43/92 (46%)
Frame = +1
Query: 154 SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIV 333
S K+ DP + AG I+ + + P++RVK +LQ++ + Y G V
Sbjct: 126 SYKLPVSKDP-ELLRSLAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPV 180
Query: 334 DAFVRIPKEQGLLSFWRGNFANVIRYLPDPGA 429
D RI +E G+ ++G +R +P GA
Sbjct: 181 DCLRRIYREAGVRGVYKGISVTAMRDIPGWGA 212
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 196 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 375
K+ +AG + A + P++ +K+ LQ + K YK D F +I + +G+
Sbjct: 40 KNSIAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYY 98
Query: 376 FWRGNFANVIRYLPD 420
+RG ++ +P+
Sbjct: 99 LFRGVTVPILNSIPN 113
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +1
Query: 202 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 381
F++G + V+ + P++ V+ L VQ +S + ++ Y GIV A RI E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 382 RGNFANVIRYLPDPGAQ 432
+G +++ P G Q
Sbjct: 90 KGLVPSLVSIAPFLGVQ 106
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 205 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 381
+ G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 382 RGNFANVIRYLPDPGAQL 435
G V R G Q+
Sbjct: 174 TGMKPTVKRAACISGTQI 191
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 205 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 381
LA + A T VA P++ V+ Q + Y+G +D + + +G+L+ +
Sbjct: 215 LASALVAGFVATCVASPVDIVRTRFMTQPKDTK-GRPLVYQGTLDCIYKTVRHEGILALY 273
Query: 382 RGNFANVIR 408
+G F N R
Sbjct: 274 KGFFPNWTR 282
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +1
Query: 202 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 381
F +GGI+ +S P++ VK Q + +Y G D +I G+ +F
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 382 RGNFANVIRYLPDPGAQL 435
+G A ++R P A L
Sbjct: 421 QGLLATILRGFPTNAATL 438
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +1
Query: 301 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYLPDPG 426
I ++Y G+++AF RI +++G+ +F+RG +I +P G
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAG 60
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/75 (24%), Positives = 39/75 (52%)
Frame = +1
Query: 193 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 372
A++ +AG +S + A P++ +K+ LQ + K +KG +D F++ + +GL
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79
Query: 373 SFWRGNFANVIRYLP 417
++G + ++ P
Sbjct: 80 GLYKGMLSPLLMATP 94
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 247 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 387
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.5 bits (78), Expect = 0.032
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 202 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL-LSF 378
F+ GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + K+ G+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRGL 232
Query: 379 WRGNFANVIRYLP 417
+RG N +R P
Sbjct: 233 YRGLSINYLRVCP 245
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 328 IVDAFVRIPKEQGLLSFWRGNFANVIRYLP 417
++ AF I + +GLL++++GN A ++R P
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFP 42
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 35.1 bits (77), Expect = 0.042
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 319 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYLPDPGAQLRLQGQVQ 456
Y + +A R+ KE+G+L+ WRG +R + AQL Q +
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAK 80
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 202 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 381
F A IS + A P++ K +Q + I YKG +D RI + +G+ + W
Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153
Query: 382 RG 387
+G
Sbjct: 154 KG 155
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 35.1 bits (77), Expect = 0.042
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 196 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 375
K LAGGI+ + P E VK LQ+ + AA Y+G +D + K G+L
Sbjct: 42 KAILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLG 97
Query: 376 FWRG 387
+RG
Sbjct: 98 LYRG 101
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 35.1 bits (77), Expect = 0.042
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +1
Query: 316 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYLPDPGAQLRLQGQVQAGV 465
+Y G+ +I +++GL +++GN N++R +P Q + + G+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKKGI 639
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 35.1 bits (77), Expect = 0.042
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1
Query: 208 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 387
AG ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 388 NFANVIRYLP 417
+I P
Sbjct: 268 AVPRMIVIAP 277
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 208 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWR 384
AG +A + P E +K LQ QH + I+ K G++D ++I + G +R
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171
Query: 385 GNFANVIRYLP 417
G A R +P
Sbjct: 172 GMTATWAREVP 182
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 250 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYLPDPG 426
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R +P G
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANG 279
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 31.9 bits (69), Expect = 0.39
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 196 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 375
+ FLAGG ++ V +T P++ + L +Q Q + KG + G
Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGG 163
Query: 376 FWRGNFANVIRYLP 417
F++G FA+++ Y P
Sbjct: 164 FYKGYFASLMTYAP 177
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 331 VDAFVRIPKEQGLLSFWRGNFANVIRYLPDPGAQLRLQGQVQ 456
+DA ++IP+ +GL S WRG ++ +P+ L Q++
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.9 bits (69), Expect = 0.39
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 214 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 224 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 90
A++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 31.1 bits (67), Expect = 0.69
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = -3
Query: 578 RSQGGTRSTERWLRRHHRRPDYQRSNARTAS-SCQRRRGTPACTCP*R-RS*APGSGKYL 405
RSQ +R++ RWL R R+P S+ R++S SC P R S +P S Y
Sbjct: 13 RSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSCSPGDPLVLERPPPRWSSNSPYSESYY 72
Query: 404 MTLA-KLPRQNERRPCSLGMRTKASTIPL*RW 312
+LA L R++ P + A+ P W
Sbjct: 73 NSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 104
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 31.1 bits (67), Expect = 0.69
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLL 372
K+F+ G +A+ + P+E VK +Q+Q + + Y+ + A I K +G+L
Sbjct: 6 KEFVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGIL 65
Query: 373 SFWRGNFANVIRYLPDPGAQL 435
+ +G F +I + G +L
Sbjct: 66 AMQKGLFPALIYQVIMNGTRL 86
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 0.91
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 232 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 390
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 224 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 90
A++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 208 AGGISAAVSKTAVAPIERVKLLLQ 279
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
LA GIS ++ + P E + L+ Q + Q+Y+ + +E+G +
Sbjct: 936 LAAGISKCIATSLCYPHEVARTRLRQQE--SEFLGRQKYRSFFQTLGTVLREEGWRGLYG 993
Query: 385 GNFANVIRYLPD 420
G +VIR +P+
Sbjct: 994 GLGTHVIRQVPN 1005
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 512 QRSNARTASSCQRRRGTPACTCP 444
Q + R S CQRRRG C CP
Sbjct: 934 QLVSCRFYSKCQRRRGGAQCVCP 956
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 270 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 371
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 270 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 371
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 270 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 371
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 270 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 371
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 205 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 384
LAG + A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R
Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53
Query: 385 GNFANVIRYLP 417
+ +P
Sbjct: 54 SYTTQLSMNIP 64
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/74 (21%), Positives = 29/74 (39%)
Frame = +1
Query: 196 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 375
K+F AGG P++ +K+ LQ K + G D ++ + +G
Sbjct: 28 KNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRPKP-GEKPMFTGTFDCAMKTIRNEGFFG 86
Query: 376 FWRGNFANVIRYLP 417
++G A + P
Sbjct: 87 LYKGMAAPITGVTP 100
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +3
Query: 45 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 155
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 270 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 371
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 24 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 146
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,445,671
Number of Sequences: 59808
Number of extensions: 341117
Number of successful extensions: 1223
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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