Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0995
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...   143   4e-36
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...   143   4e-36
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...   143   4e-36
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   1.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.8  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    23   7.2  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   9.5  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score =  143 bits (346), Expect = 4e-36
 Identities = 69/85 (81%), Positives = 74/85 (87%)
 Frame = +1

Query: 163 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 342
           M+  ADP  FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD F
Sbjct: 1   MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60

Query: 343 VRIPKEQGLLSFWRGNFANVIRYLP 417
           VRIPKEQG+ +FWRGN ANVIRY P
Sbjct: 61  VRIPKEQGIGAFWRGNLANVIRYFP 85



 Score = 87.0 bits (206), Expect = 4e-19
 Identities = 40/54 (74%), Positives = 40/54 (74%)
 Frame = +2

Query: 422 QALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFAR 583
           QALNFAFKD YKQVFLGGVDK TQFWRYF            TSLCFVYPLDFAR
Sbjct: 87  QALNFAFKDVYKQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFAR 140



 Score = 35.1 bits (77), Expect = 0.002
 Identities = 17/53 (32%), Positives = 33/53 (62%)
 Frame = +1

Query: 250 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 408
           P + V+  + +Q  S    ++  YK  +D +V+I K++G  +F++G F+NV+R
Sbjct: 232 PFDTVRRRMMMQ--SWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR 282


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score =  143 bits (346), Expect = 4e-36
 Identities = 69/85 (81%), Positives = 74/85 (87%)
 Frame = +1

Query: 163 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 342
           M+  ADP  FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD F
Sbjct: 1   MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60

Query: 343 VRIPKEQGLLSFWRGNFANVIRYLP 417
           VRIPKEQG+ +FWRGN ANVIRY P
Sbjct: 61  VRIPKEQGIGAFWRGNLANVIRYFP 85



 Score = 87.0 bits (206), Expect = 4e-19
 Identities = 40/54 (74%), Positives = 40/54 (74%)
 Frame = +2

Query: 422 QALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFAR 583
           QALNFAFKD YKQVFLGGVDK TQFWRYF            TSLCFVYPLDFAR
Sbjct: 87  QALNFAFKDVYKQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFAR 140



 Score = 35.1 bits (77), Expect = 0.002
 Identities = 17/53 (32%), Positives = 33/53 (62%)
 Frame = +1

Query: 250 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 408
           P + V+  + +Q  S    ++  YK  +D +V+I K++G  +F++G F+NV+R
Sbjct: 232 PFDTVRRRMMMQ--SWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR 282


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score =  143 bits (346), Expect = 4e-36
 Identities = 69/85 (81%), Positives = 74/85 (87%)
 Frame = +1

Query: 163 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 342
           M+  ADP  FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ  SKQIA D++YKGIVD F
Sbjct: 1   MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60

Query: 343 VRIPKEQGLLSFWRGNFANVIRYLP 417
           VRIPKEQG+ +FWRGN ANVIRY P
Sbjct: 61  VRIPKEQGIGAFWRGNLANVIRYFP 85



 Score = 87.0 bits (206), Expect = 4e-19
 Identities = 40/54 (74%), Positives = 40/54 (74%)
 Frame = +2

Query: 422 QALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFAR 583
           QALNFAFKD YKQVFLGGVDK TQFWRYF            TSLCFVYPLDFAR
Sbjct: 87  QALNFAFKDVYKQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFAR 140



 Score = 36.3 bits (80), Expect = 7e-04
 Identities = 17/53 (32%), Positives = 34/53 (64%)
 Frame = +1

Query: 250 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 408
           P + V+  + +Q  S +  ++  YK  +D +V+I K++G  +F++G F+NV+R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR 282


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 22.6 bits (46), Expect(2) = 1.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 337 RRRYPCNAGRR 305
           RRRYP NAG +
Sbjct: 346 RRRYPTNAGHK 356



 Score = 21.0 bits (42), Expect(2) = 1.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 394 RSYHARMKGDPAPWGCGRRRRRYP 323
           R    R++  P P    R RRR P
Sbjct: 315 REAAGRLRTGPVPGAAERHRRRRP 338


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 581 VRSQGGTRSTERWLRRHHRRPDYQRSNARTASSCQR 474
           V ++    + +RWLR HH    + ++     SS Q+
Sbjct: 690 VVAEEAVSAVDRWLREHHLELAHAKTEMTVISSLQQ 725


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 422 QALNFAFKDKYKQVFLGGVDKKTQF 496
           Q +NFA+ D    + LG  D  T+F
Sbjct: 237 QGINFAWDDGIFSIALGNPDPVTKF 261


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 111 ATPTSTYSPSEDHIIEQNVEP 173
           A PT+   P EDH  +  ++P
Sbjct: 434 ADPTAVIFPHEDHYSQPQLQP 454


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,413
Number of Sequences: 2352
Number of extensions: 10675
Number of successful extensions: 47
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)