BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0995 (583 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 153 2e-39 AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 153 2e-39 AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 23 2.9 AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 8.9 >AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 153 bits (370), Expect = 2e-39 Identities = 69/85 (81%), Positives = 78/85 (91%) Frame = +1 Query: 163 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 342 MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60 Query: 343 VRIPKEQGLLSFWRGNFANVIRYLP 417 VRIPKEQG LS+WRGN ANVIRY P Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFP 85 Score = 84.6 bits (200), Expect = 6e-19 Identities = 40/54 (74%), Positives = 40/54 (74%) Frame = +2 Query: 422 QALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFAR 583 QALNFAFKDKYKQVFLGGVDK TQF RYF TSLCFVYPLDFAR Sbjct: 87 QALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFAR 140 Score = 27.5 bits (58), Expect = 0.10 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = +1 Query: 250 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 408 P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282 >AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 153 bits (370), Expect = 2e-39 Identities = 69/85 (81%), Positives = 78/85 (91%) Frame = +1 Query: 163 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 342 MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60 Query: 343 VRIPKEQGLLSFWRGNFANVIRYLP 417 VRIPKEQG LS+WRGN ANVIRY P Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFP 85 Score = 84.6 bits (200), Expect = 6e-19 Identities = 40/54 (74%), Positives = 40/54 (74%) Frame = +2 Query: 422 QALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFAR 583 QALNFAFKDKYKQVFLGGVDK TQF RYF TSLCFVYPLDFAR Sbjct: 87 QALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFAR 140 Score = 27.5 bits (58), Expect = 0.10 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = +1 Query: 250 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 408 P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282 >AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha protein precursor protein. Length = 153 Score = 22.6 bits (46), Expect = 2.9 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Frame = -3 Query: 497 RTASSCQR---RRGTPACTCP*RRS*APGSGKYLMTLAKLPRQNERRPCS 357 R+ CQ R + + CP + PG K+ + K P + RPC+ Sbjct: 73 RSCMCCQESGEREASVSLFCPRAK---PGEKKFRKVITKAPLECMCRPCT 119 >AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. Length = 147 Score = 21.0 bits (42), Expect = 8.9 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = +1 Query: 88 VIPHPRVPQLPPRHIHLVKIT 150 +I P +LPP H H +T Sbjct: 92 IITIPPTRKLPPLHPHTAMVT 112 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 150,403 Number of Sequences: 438 Number of extensions: 2850 Number of successful extensions: 10 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 16870914 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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