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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0994
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.    149   1e-36
AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical...   149   1e-36
Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical pr...   120   1e-27
Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical pr...   111   3e-25
AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical...   103   8e-23
AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding...    76   2e-14
U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding p...    66   2e-11
U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding p...    66   2e-11
Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical pr...    58   5e-09
Z81565-3|CAH60773.1|  489|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81565-2|CAB04581.1|  507|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    29   2.9  
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.    29   2.9  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    29   2.9  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    29   2.9  
AL031632-3|CAA21006.1|  283|Caenorhabditis elegans Hypothetical ...    29   3.8  
U23147-4|AAC46689.1|  464|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>U27353-1|AAA68610.1|  108|Caenorhabditis elegans rotamase protein.
          Length = 108

 Score =  149 bits (362), Expect = 1e-36
 Identities = 70/107 (65%), Positives = 82/107 (76%)
 Frame = +3

Query: 129 MGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGW 308
           MGVD + +  G+  T PK GQTV  HY  TL+NGKK DSSRDRG PFKF +GKG+VIKGW
Sbjct: 1   MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60

Query: 309 DQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRV 449
           DQG+A+MSVGE++KLT S D  YG RG P  IP NATL+F+VELL V
Sbjct: 61  DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>AL034393-20|CAA22330.1|  108|Caenorhabditis elegans Hypothetical
           protein Y18D10A.19 protein.
          Length = 108

 Score =  149 bits (362), Expect = 1e-36
 Identities = 70/107 (65%), Positives = 82/107 (76%)
 Frame = +3

Query: 129 MGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGW 308
           MGVD + +  G+  T PK GQTV  HY  TL+NGKK DSSRDRG PFKF +GKG+VIKGW
Sbjct: 1   MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60

Query: 309 DQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRV 449
           DQG+A+MSVGE++KLT S D  YG RG P  IP NATL+F+VELL V
Sbjct: 61  DQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELLGV 107


>Z92832-2|CAB07371.1|  431|Caenorhabditis elegans Hypothetical
           protein F31D4.3 protein.
          Length = 431

 Score =  120 bits (288), Expect = 1e-27
 Identities = 56/94 (59%), Positives = 64/94 (68%)
 Frame = +3

Query: 159 GNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVG 338
           G G   P  G TV VHY GTL+NG KFDSSRDRG  F F LG+G+VIKGWD G+A M+ G
Sbjct: 24  GQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKG 83

Query: 339 ERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVEL 440
           E A+ T   D+ YG  G P  IP  ATLIF+VEL
Sbjct: 84  EVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117


>Z68760-1|CAA92994.1|  139|Caenorhabditis elegans Hypothetical
           protein F36H1.1 protein.
          Length = 139

 Score =  111 bits (268), Expect = 3e-25
 Identities = 51/91 (56%), Positives = 64/91 (70%)
 Frame = +3

Query: 180 KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTC 359
           + G  + +HYTGTL +G +FDSSR R + F FTLG+G+VIKGWDQGL  M VGER  LT 
Sbjct: 43  RKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTI 102

Query: 360 SPDFAYGSRGHPGVIPPNATLIFDVELLRVE 452
            P   YG RG P  IP N+ L FDVEL++++
Sbjct: 103 PPHLGYGERGAPPKIPGNSVLKFDVELMKID 133


>AL034393-19|CAA22328.1|  290|Caenorhabditis elegans Hypothetical
           protein Y18D10A.25 protein.
          Length = 290

 Score =  103 bits (248), Expect = 8e-23
 Identities = 50/96 (52%), Positives = 63/96 (65%)
 Frame = +3

Query: 120 YKTMGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVI 299
           Y  +GVD + +  G+  T  K GQTV  HY   L +G K DSSRDR  PFKF +GKG+VI
Sbjct: 194 YAKIGVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVI 253

Query: 300 KGWDQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIP 407
           KGWDQG+A+MSV E++KLT +P F +     P  IP
Sbjct: 254 KGWDQGVAQMSVKEKSKLTIAPAFGFEKGKLPAGIP 289



 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 37/103 (35%), Positives = 50/103 (48%)
 Frame = +3

Query: 132 GVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWD 311
           G+  +    GNG   P+ GQ V  +    L +     S+ +   P  F +G G+VI G D
Sbjct: 85  GIHHQVDKAGNG-VMPENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLD 143

Query: 312 QGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVEL 440
            G+ KM VGE A    S  + YG  G  G+IP NA+L   V L
Sbjct: 144 IGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRL 186


>AF016430-1|AAB65370.1|  261|Caenorhabditis elegans Fk506-binding
           protein family protein3 protein.
          Length = 261

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
 Frame = +3

Query: 132 GVDVETISPGNGSTYP-KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGW 308
           GV +       G T   + G T+   YT  L++G   DSS  R +PF F +G G VIKG 
Sbjct: 147 GVHIHITHEVEGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGM 206

Query: 309 DQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVEL 440
           D  +  M  GE+ K+   P+ AYG  G P  IP N+ L FD+ L
Sbjct: 207 DIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSL 250



 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +3

Query: 261 QPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVEL 440
           +P+ FTLGKG+VI G +  +  M VGE+ K+   P+  +   G   V     TL + VEL
Sbjct: 72  KPYTFTLGKGEVIHGMEIAMEGMCVGEQRKVIIPPEQGFDEDGDE-VEGKGETLYYFVEL 130


>U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform a protein.
          Length = 264

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 35/87 (40%), Positives = 43/87 (49%)
 Frame = +3

Query: 180 KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTC 359
           K G T+   Y   L++G   DSS  R  PF F L   +VIKG D  +  M  GER ++  
Sbjct: 169 KSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVI 228

Query: 360 SPDFAYGSRGHPGVIPPNATLIFDVEL 440
             DF YG  G    IP  A L FD+ L
Sbjct: 229 PSDFGYGDDGRAPAIPGKARLYFDITL 255



 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = +3

Query: 132 GVDVETISPGNGSTYP---KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIK 302
           G++++ I P      P   + G  +   Y  + ++GK+  S+ ++ +P+ FTLGKG VI 
Sbjct: 29  GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 87

Query: 303 GWDQGLAKMSVGERAKLTCSPDFAYGSRGHP-GVIPPNATLIFDVELL 443
           G ++ +  M  GE+ K+    +  +G +G     I  + TL + V+L+
Sbjct: 88  GMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLV 135


>U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform b protein.
          Length = 300

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 35/87 (40%), Positives = 43/87 (49%)
 Frame = +3

Query: 180 KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTC 359
           K G T+   Y   L++G   DSS  R  PF F L   +VIKG D  +  M  GER ++  
Sbjct: 205 KSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVI 264

Query: 360 SPDFAYGSRGHPGVIPPNATLIFDVEL 440
             DF YG  G    IP  A L FD+ L
Sbjct: 265 PSDFGYGDDGRAPAIPGKARLYFDITL 291



 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = +3

Query: 132 GVDVETISPGNGSTYP---KPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIK 302
           G++++ I P      P   + G  +   Y  + ++GK+  S+ ++ +P+ FTLGKG VI 
Sbjct: 65  GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 123

Query: 303 GWDQGLAKMSVGERAKLTCSPDFAYGSRGHP-GVIPPNATLIFDVELL 443
           G ++ +  M  GE+ K+    +  +G +G     I  + TL + V+L+
Sbjct: 124 GMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQLV 171


>Z75554-8|CAA99959.2|  259|Caenorhabditis elegans Hypothetical
           protein ZC455.10 protein.
          Length = 259

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 30/85 (35%), Positives = 42/85 (49%)
 Frame = +3

Query: 186 GQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSP 365
           G  +   Y   L++    DSS  R  PF F L   +VI G D  +  M  GER ++    
Sbjct: 166 GDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPS 225

Query: 366 DFAYGSRGHPGVIPPNATLIFDVEL 440
           ++ YGS+G P  IP  A L F++ L
Sbjct: 226 EYGYGSQGSPPEIPGGARLFFEIVL 250



 Score = 41.5 bits (93), Expect = 5e-04
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +3

Query: 186 GQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSP 365
           G  V  +Y  T + G +  S+  + +P+ FTLG+  VI G D+ +  M +GE  K+   P
Sbjct: 52  GDVVDQYYKLTDEKGVEIGSNFGK-KPYTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPP 110

Query: 366 --DFAYGSRGHP 395
              FA  S G P
Sbjct: 111 KLGFAKDSTGQP 122


>Z81565-3|CAH60773.1|  489|Caenorhabditis elegans Hypothetical
           protein K06G5.1b protein.
          Length = 489

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +3

Query: 216 TLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHP 395
           TL NGK  D+S    +   FT+      K +      + V        SP+  YGS G  
Sbjct: 88  TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144

Query: 396 GVIPPN 413
           G++PP+
Sbjct: 145 GLLPPS 150


>Z81565-2|CAB04581.1|  507|Caenorhabditis elegans Hypothetical
           protein K06G5.1a protein.
          Length = 507

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +3

Query: 216 TLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHP 395
           TL NGK  D+S    +   FT+      K +      + V        SP+  YGS G  
Sbjct: 88  TLYNGKVADNST---KITTFTVADSGTTKSYTSSTQYIYVEYTQDNATSPNAYYGSIGAG 144

Query: 396 GVIPPN 413
           G++PP+
Sbjct: 145 GLLPPS 150


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
            K08C7.3b protein.
          Length = 3672

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 370  KSGEHVNFALSPTDIFANP*SHPFMTSPLPNVNLKGCPLSRDES 239
            KSGE  +F     D+  N     F  S +  ++L GC LS DE+
Sbjct: 3199 KSGETPSFVGCIGDVTLNGKLLDFANSEIKEISLNGCSLSDDEN 3242


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
            K08C7.3a protein.
          Length = 3704

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 370  KSGEHVNFALSPTDIFANP*SHPFMTSPLPNVNLKGCPLSRDES 239
            KSGE  +F     D+  N     F  S +  ++L GC LS DE+
Sbjct: 3199 KSGETPSFVGCIGDVTLNGKLLDFANSEIKEISLNGCSLSDDEN 3242


>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
          Length = 1518

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 370  KSGEHVNFALSPTDIFANP*SHPFMTSPLPNVNLKGCPLSRDES 239
            KSGE  +F     D+  N     F  S +  ++L GC LS DE+
Sbjct: 1013 KSGETPSFVGCIGDVTLNGKLLDFANSEIKEISLNGCSLSDDEN 1056


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3704

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 370  KSGEHVNFALSPTDIFANP*SHPFMTSPLPNVNLKGCPLSRDES 239
            KSGE  +F     D+  N     F  S +  ++L GC LS DE+
Sbjct: 3199 KSGETPSFVGCIGDVTLNGKLLDFANSEIKEISLNGCSLSDDEN 3242


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
            protein.
          Length = 3704

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 370  KSGEHVNFALSPTDIFANP*SHPFMTSPLPNVNLKGCPLSRDES 239
            KSGE  +F     D+  N     F  S +  ++L GC LS DE+
Sbjct: 3199 KSGETPSFVGCIGDVTLNGKLLDFANSEIKEISLNGCSLSDDEN 3242


>AL031632-3|CAA21006.1|  283|Caenorhabditis elegans Hypothetical
           protein Y32B12B.3 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 520 VVFFMKNLVKTLRPECFSINKHYSTRKSSTSKIRVAFGGITPGWPLEP 377
           V+F+ + ++ T  P C S NK Y      T K+ +        WP+ P
Sbjct: 43  VLFYSRLIIDTAYPFCASFNKFYYFLHLFTEKLVIRNATFFMLWPIIP 90


>U23147-4|AAC46689.1|  464|Caenorhabditis elegans Hypothetical
           protein C18H9.5 protein.
          Length = 464

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 216 TLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWD 311
           T+++GK F+SS+ R Q  KFT     + K W+
Sbjct: 239 TIRDGKIFESSKHRPQNVKFT----QIFKNWE 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,752,485
Number of Sequences: 27780
Number of extensions: 315363
Number of successful extensions: 715
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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