Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0994
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 125 3e-29
At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase / F... 123 1e-28
At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) / immuno... 114 4e-26
At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) / ... 104 6e-23
At4g25340.1 68417.m03647 immunophilin-related / FKBP-type peptid... 103 1e-22
At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) / ... 95 4e-20
At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type pept... 93 1e-19
At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type pept... 93 1e-19
At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identi... 84 7e-17
At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-proly... 66 2e-11
At4g39710.1 68417.m05620 immunophilin, putative / FKBP-type pept... 62 2e-10
At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type pept... 62 2e-10
At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-proly... 59 3e-09
At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase, pu... 55 4e-08
At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase, pu... 55 4e-08
At3g21640.1 68416.m02729 FKBP-type peptidyl-prolyl cis-trans iso... 53 2e-07
At1g20810.1 68414.m02606 immunophilin / FKBP-type peptidyl-proly... 34 0.094
At5g13410.1 68418.m01544 immunophilin / FKBP-type peptidyl-proly... 32 0.29
At1g26580.1 68414.m03238 expressed protein similar to putative M... 29 3.5
At2g04440.1 68415.m00448 NUDIX/mutT hydrolase family protein sim... 28 4.7
At3g56600.1 68416.m06294 phosphatidylinositol 3- and 4-kinase fa... 27 8.2
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 125 bits (301), Expect = 3e-29
Identities = 58/89 (65%), Positives = 64/89 (71%)
Frame = +3
Query: 177 PKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLT 356
P+ G V VHYTGTL +G KFDSSRDRG PFKFTLG+G VIKGWD G+ M GE A T
Sbjct: 62 PENGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGHVIKGWDLGIKTMKKGENAIFT 121
Query: 357 CSPDFAYGSRGHPGVIPPNATLIFDVELL 443
P+ AYG G P IPPNATL FDVEL+
Sbjct: 122 IPPELAYGETGSPPTIPPNATLQFDVELI 150
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 6/104 (5%)
Frame = +3
Query: 150 ISPGNGSTYPKPGQTVVVHYTGTLQNGKKF---DSSRDRGQPFKFTLGKGDVIKGWDQGL 320
+ G G P G V + G LQ+G + +PF+F + + VI+G ++ +
Sbjct: 287 LKEGEGYERPNEGAIVKLKLIGKLQDGTTVFVKKGHEEDEEPFEFKIDEEQVIEGLEKAV 346
Query: 321 AKMSVGERAKLTCSPDFAYG---SRGHPGVIPPNATLIFDVELL 443
M GE A +T SP++A+G S+ VIPPN+T+ ++VEL+
Sbjct: 347 MGMKKGEVALITISPEYAFGSSESKQELAVIPPNSTVYYEVELV 390
Score = 47.2 bits (107), Expect = 9e-06
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Frame = +3
Query: 132 GVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWD 311
GV + I G PK V V Y L++G S +FT+ +G
Sbjct: 163 GVSKKIIVEGEKWEKPKDLDEVYVKYEARLEDGTIVGKS----DGVEFTVKEGHFCPALS 218
Query: 312 QGLAKMSVGERAKLTCSPDFAYGSRGHP------GVIPPNATLIFDVELL 443
+ + M GE+ LT P + +G G P IPPNATL D+EL+
Sbjct: 219 KAVKTMKRGEKVLLTVKPQYGFGEFGRPASDGLQAAIPPNATLQIDLELV 268
>At3g25230.1 68416.m03152 peptidyl-prolyl cis-trans isomerase /
FK506-binding protein (ROF1) identical to rotamase FKBP
(ROF1) GB:U49453 [Arabidopsis thaliana] (Mol. Gen.
Genet. 252 (5), 510-517 (1996))
Length = 551
Score = 123 bits (296), Expect = 1e-28
Identities = 59/105 (56%), Positives = 68/105 (64%)
Frame = +3
Query: 132 GVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWD 311
G+ + + G G P+ G V VHYTGTL +G KFDSSRDR PFKFTLG+G VIKGWD
Sbjct: 39 GLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKGWD 98
Query: 312 QGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLR 446
G+ M GE A T + AYG G P IP NATL FDVELL+
Sbjct: 99 IGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELLK 143
Score = 64.9 bits (151), Expect = 4e-11
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 5/105 (4%)
Frame = +3
Query: 144 ETISPGNGSTYPKPGQTVVVHYTGTLQNGKKF--DSSRDRGQPFKFTLGKGDVIKGWDQG 317
+ + G+G P G V V G LQ+G F + +PF+F + V+ G D+
Sbjct: 276 KVLKEGDGYERPNEGAVVKVKLIGKLQDGTVFLKKGHGENEEPFEFKTDEEQVVDGLDRA 335
Query: 318 LAKMSVGERAKLTCSPDFAYG---SRGHPGVIPPNATLIFDVELL 443
+ KM GE A +T P++A+G S+ V+PPN+T+ ++V+LL
Sbjct: 336 VMKMKKGEVALVTIDPEYAFGSNESQQELAVVPPNSTVTYEVDLL 380
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = +3
Query: 123 KTMGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIK 302
K GV + ++ G PK V+V + L++G S +FT+ G
Sbjct: 152 KDGGVFKKILAVGEKWENPKDLDEVLVKFEAKLEDGTVVGKS----DGVEFTVKDGHFCP 207
Query: 303 GWDQGLAKMSVGERAKLTCSPDFAYGSRGHP-----GVIPPNATLIFDVELL 443
+ + M GE+ LT P + +G +G P G +PPNATL ++EL+
Sbjct: 208 ALTKAVKTMKKGEKVLLTVKPQYGFGEKGKPASAGEGAVPPNATLEINLELV 259
>At5g64350.1 68418.m08082 FK506-binding protein (FKBP12) /
immunophilin identical to immunophilin (GI:2104957)
[Arabidopsis thaliana]
Length = 112
Score = 114 bits (275), Expect = 4e-26
Identities = 59/113 (52%), Positives = 78/113 (69%), Gaps = 5/113 (4%)
Frame = +3
Query: 129 MGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNG---KKFDSSRDRGQ-PFKFTLGKGDV 296
MGV+ + I PGNG P PGQTV VH TG ++G +KF S++D GQ PF F +GKG V
Sbjct: 1 MGVEKQVIRPGNGPK-PAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAV 59
Query: 297 IKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHPG-VIPPNATLIFDVELLRVE 452
IKGWD+G+ M +GE A+L CS D+AYG+ G P I PN+ L F++E+L V+
Sbjct: 60 IKGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVLSVQ 112
>At5g48580.1 68418.m06009 FK506-binding protein 2-2 (FKBP15-2) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38936| FK506-binding protein
2-2 precursor (EC 5.2.1.8);
Length = 163
Score = 104 bits (249), Expect = 6e-23
Identities = 49/88 (55%), Positives = 56/88 (63%)
Frame = +3
Query: 186 GQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSP 365
G T+ VHY G L +G FDSS +RG PF+F LG G VIKGWDQGL VGE+ KL
Sbjct: 52 GDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPA 111
Query: 366 DFAYGSRGHPGVIPPNATLIFDVELLRV 449
YG +G P IP ATLIFD EL+ V
Sbjct: 112 KLGYGEQGSPPTIPGGATLIFDTELIAV 139
>At4g25340.1 68417.m03647 immunophilin-related / FKBP-type
peptidyl-prolyl cis-trans isomerase-related immunophilin
FKBP46 - Spodoptera frugiperda (fall
armyworm),PIR2:A55320
Length = 477
Score = 103 bits (246), Expect = 1e-22
Identities = 58/110 (52%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Frame = +3
Query: 132 GVDVETISPG--NGSTYPKPGQTVVVHYTGTLQ-NGKKFDSSRDRGQPFKFTLGKGDVIK 302
G+ VE +S G NG PG+TV V Y G LQ NGK FDS+ + PFKF LG G VIK
Sbjct: 370 GLIVEELSMGKPNGKR-ADPGKTVSVRYIGKLQKNGKIFDSNIGKS-PFKFRLGIGSVIK 427
Query: 303 GWDQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRVE 452
GWD G+ M VG++ KLT P YG +G G IPPN+ L FDVEL+ V+
Sbjct: 428 GWDVGVNGMRVGDKRKLTIPPSMGYGVKGAGGQIPPNSWLTFDVELINVQ 477
>At3g25220.1 68416.m03150 FK506-binding protein 2-1 (FKBP15-1) /
immunophilin / peptidyl-prolyl cis-trans isomerase /
rotamase identical to SP|Q38935 FK506-binding protein
2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans
isomerase) (PPiase) (Rotamase) (15 kDa FKBP) (FKBP-15-1)
{Arabidopsis thaliana}, immunophilin (FKBP15-1)
GB:U52046 [Arabidopsis thaliana] (Proc. Natl. Acad. Sci.
U.S.A. 93 (14), 6964-6969 (1996))
Length = 153
Score = 95.1 bits (226), Expect = 4e-20
Identities = 46/88 (52%), Positives = 52/88 (59%)
Frame = +3
Query: 186 GQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSP 365
G + VHY G L +G FDSS +RG P +F LG G VI GWDQGL VGE+ KL
Sbjct: 52 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPS 111
Query: 366 DFAYGSRGHPGVIPPNATLIFDVELLRV 449
YG G P IP ATLIFD EL+ V
Sbjct: 112 KLGYGDNGSPPKIPGGATLIFDTELVAV 139
>At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative POSSIBLE
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE) (EC 5.2.1.8)
(PPIASE) (ROTAMASE) SP:P30416(Mouse);P59 PROTEIN (HSP
BINDING IMMUNOPHILIN), rabbit,
SWISSPROT:P27124:FKB4_RABBIT
Length = 190
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 195 VVVHYTGTLQNGKK-FDSSRDRGQPFKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDF 371
V VHY G L +K FD++R+ F F LG G VI+ WD L M VGE AK+TC P++
Sbjct: 35 VDVHYEGILAEDEKVFDTTREDNLVFSFELGTGSVIRSWDIALKTMKVGEVAKITCKPEY 94
Query: 372 AYGSRGHPGVIPPNATLIFDVELL 443
AYG G P IPP+ATLIF+VEL+
Sbjct: 95 AYGRAGSPPDIPPDATLIFEVELV 118
>At5g05420.1 68418.m00584 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative contains
similarity to peptidyl-prolyl cis-trans isomerase
Length = 143
Score = 93.1 bits (221), Expect = 1e-19
Identities = 54/109 (49%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Frame = +3
Query: 132 GVDVETISPGN-GSTYPKPGQTVVVHYTGTLQ-NGKKFDSSRDRGQPFKFTLGKGDVIKG 305
G+ VE + GN +PG+ V VHYTG LQ NGK FDS+ + + +KF L G VIKG
Sbjct: 37 GLIVEELCMGNPNGKKAEPGKRVSVHYTGKLQGNGKIFDSTVGKSR-YKFRLDAGKVIKG 95
Query: 306 WDQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRVE 452
D GL M VG + KLT P+ YG+ G G IPP++ L+FDVELL V+
Sbjct: 96 LDVGLNGMLVGGKRKLTIPPEMGYGAEG-AGSIPPDSWLVFDVELLNVK 143
>At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identical
to Probable FKBP-type peptidyl-prolyl cis-trans
isomerase 3, chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9SCY2) / FK506 binding protein 1 (GI:21535744)
[Arabidopsis thaliana]; contains Pfam PF00254:
peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 208
Score = 84.2 bits (199), Expect = 7e-17
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 11/97 (11%)
Frame = +3
Query: 186 GQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWDQ------GLAKMSVGERA 347
GQ + HY G L+NGK FDSS +RG+P F +G G+VIKGWDQ G+ M G +
Sbjct: 109 GQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKR 168
Query: 348 KLTCSPDFAYGSR-----GHPGVIPPNATLIFDVELL 443
L P+ AYG R G +IPP + L+FD+E +
Sbjct: 169 TLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 205
>At2g43560.1 68415.m05412 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein identical to Probable
FKBP-type peptidyl-prolyl cis-trans isomerase 2,
chloroplast precursor (Ppiase) (Rotamase)
(SP:O22870)[Arabidopsis thaliana]; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 223
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Frame = +3
Query: 132 GVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWD 311
G+ + I G G + P G V +Y + +G+ FDSS ++G P+ F +G G VIKG D
Sbjct: 107 GLQYKDIKVGRGPS-PPVGFQVAANYVAMVPSGQIFDSSLEKGLPYLFRVGSGQVIKGLD 165
Query: 312 QGLAKMSVGERAKLTCSPDFAY--GSRGHPG--VIPPNATLIFDVEL 440
+G+ M G + +L A+ G PG + PN+ +IFDV L
Sbjct: 166 EGILSMKAGGKRRLYIPGPLAFPKGLVSAPGRPRVAPNSPVIFDVSL 212
>At4g39710.1 68417.m05620 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative similar to
FK506 binding protein 1 (GP:21535744) [Arabidopsis
thaliana]
Length = 217
Score = 62.5 bits (145), Expect = 2e-10
Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Frame = +3
Query: 120 YKTMGVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVI 299
Y G+ + G G P+ G V +HYT +G FDSS R +P +G G VI
Sbjct: 91 YAKSGLGFCDLDVGFGDEAPR-GVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVI 149
Query: 300 KGWDQGL------AKMSVGERAKLTCSPDFAYGSR-----GHPGVIPPNATLIFDVELLR 446
+G DQG+ M VG + KL P AYG IP NATL++D+ +
Sbjct: 150 RGLDQGILGGEGVPPMRVGGKRKLQIPPKLAYGPEPAGCFSGDCNIPGNATLLYDINFVE 209
Query: 447 V 449
+
Sbjct: 210 I 210
>At3g10060.1 68416.m01206 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative
Pfam:PF-254: FKBP-type peptidyl-prolyl cis-trans
isomerases
Length = 230
Score = 62.5 bits (145), Expect = 2e-10
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Frame = +3
Query: 132 GVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDR-----GQPFKFTLG---K 287
G+ I GNG+ K G V VHY + G F +SR G P+ F +G +
Sbjct: 106 GLKYYDIKVGNGAEAVK-GSRVAVHYVAKWK-GITFMTSRQGLGVGGGTPYGFDVGQSER 163
Query: 288 GDVIKGWDQGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRVE 452
G+V+KG D G+ M VG + + P+ AYG +G IPPNAT+ D+ELL ++
Sbjct: 164 GNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKG-VQEIPPNATIELDIELLSIK 217
>At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9M222; similar to
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA
precursor (PPiase) (Rotamase)(SP:Q8X880) [Escherichia
coli O157:H7] ; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 242
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/109 (28%), Positives = 53/109 (48%)
Frame = +3
Query: 132 GVDVETISPGNGSTYPKPGQTVVVHYTGTLQNGKKFDSSRDRGQPFKFTLGKGDVIKGWD 311
G+ + G G +PK GQ V HY G ++G++ DS+ +G P + +G ++ G++
Sbjct: 121 GLIYRDFNVGQGD-FPKDGQQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPGFE 179
Query: 312 QGLAKMSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRVE*C 458
G+ M G R ++ P+ G +FDVELL ++ C
Sbjct: 180 MGIRDMKPGGRRRIIIPPELG-PPVGPSTFFSSKQFEVFDVELLSIQNC 227
>At3g54010.2 68416.m05972 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 545
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Frame = +3
Query: 177 PKPGQTVVVHYTGTLQNGKK---FDSSRDRG-QPFKFTLGKGDVIKGWDQGLAKMSVGER 344
P + VHY G L N +K +DS D QP +F+ G+G V +G++ M GE
Sbjct: 198 PLQDSRLSVHYKGMLLNEEKTVFYDSKIDNNDQPLEFSSGEGLVPEGFEMCTRLMLPGEI 257
Query: 345 AKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRVE 452
A +TC PD+AY P + A + +++ELL E
Sbjct: 258 ALVTCPPDYAYDKFPRPPGVSEGAHVQWEIELLGFE 293
>At3g54010.1 68416.m05971 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative / pasticcino
1-D (PAS1-D) nearly identical to pasticcino 1-D
[Arabidopsis thaliana] GI:3080740
Length = 635
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Frame = +3
Query: 177 PKPGQTVVVHYTGTLQNGKK---FDSSRDRG-QPFKFTLGKGDVIKGWDQGLAKMSVGER 344
P + VHY G L N +K +DS D QP +F+ G+G V +G++ M GE
Sbjct: 288 PLQDSRLSVHYKGMLLNEEKTVFYDSKIDNNDQPLEFSSGEGLVPEGFEMCTRLMLPGEI 347
Query: 345 AKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRVE 452
A +TC PD+AY P + A + +++ELL E
Sbjct: 348 ALVTCPPDYAYDKFPRPPGVSEGAHVQWEIELLGFE 383
>At3g21640.1 68416.m02729 FKBP-type peptidyl-prolyl cis-trans
isomerase family protein similar to rof1 [Arabidopsis
thaliana] GI:1354207; contains Pfam profile: PF00254
FKBP-type peptidyl-prolyl cis-trans isomerases
Length = 365
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Frame = +3
Query: 135 VDVETISPGNGSTYPKPGQTVVVHYTGTLQNGK-KFDSSRDRGQPFKFTLGKGDV-IKGW 308
V + I G+GS P T +HY +N + KF+ + QP + LGK + G
Sbjct: 51 VSKQIIKEGHGSK-PSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGL 109
Query: 309 DQGLAKMSVGERAKLTCSPDFAYGSRGHPGV--IPPNATLIFDVELL 443
G+A M GERA + + AYG G+ +PP A L+++VE++
Sbjct: 110 AIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVI 156
>At1g20810.1 68414.m02606 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein identical to Probable
FKBP-type peptidyl-prolyl cis-trans isomerase 1,
chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9LM71)[Arabidopsis thaliana]; similar to SP|P25138
FK506-binding protein (Peptidyl-prolyl cis-trans
isomerase) (PPiase) (EC 5.2.1.8) (Rotamase) {Neisseria
meningitidis}; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 232
Score = 33.9 bits (74), Expect = 0.094
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 327 MSVGERAKLTCSPDFAYGSRGHPGVIPPNATLIFDVELLRV 449
M VG + + P+ YG +G IPP AT ++ELLRV
Sbjct: 186 MKVGGKRTVIVPPEAGYGQKGM-NEIPPGATFELNIELLRV 225
>At5g13410.1 68418.m01544 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9LYR5; similar to
FK506-binding protein (Peptidyl-prolyl cis-trans
isomerase) (PPiase) (Rotamase) (SP:P25138) [{Neisseria
meningitidis]; peptidyl-prolyl cis-trans isomerase,
Spodoptera frugiperda, EMBL:SF15038; contains Pfam
PF00254: peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 256
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 267 FKFTLGKGDVIKGWDQGLAKMSVGERAKLTCSPDFAY 377
FKFTLG +VI +++ ++ M++G ++ P+ Y
Sbjct: 173 FKFTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGY 209
>At1g26580.1 68414.m03238 expressed protein similar to putative MYB
family transcription factor GB:AAD17429 GI:4335752 from
[Arabidopsis thaliana]
Length = 493
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 168 STYPKPGQTVVVHYTGTLQNGKKFDSSRDR 257
S P PG T V H + G+KF RDR
Sbjct: 180 SVIPMPGLTTVAHIDDIVGKGRKFCVCRDR 209
>At2g04440.1 68415.m00448 NUDIX/mutT hydrolase family protein
similar to SP|P53370 Nucleoside diphosphate-linked
moiety X motif 6 {Homo sapiens}; contains Pfam profile
PF00293: NUDIX domain
Length = 215
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 303 GWDQGLAKMSVGERAKLTCSPDFAYGSRGHP 395
G+ L K S G+ + L CS D AY +G P
Sbjct: 167 GFSNVLTKNSTGKESYLYCSTDHAYFLKGKP 197
>At3g56600.1 68416.m06294 phosphatidylinositol 3- and 4-kinase
family protein low similarity to 55 kDa type II
phosphatidylinositol 4-kinase [Rattus norvegicus]
GI:13660755; contains Pfam profile PF00454:
Phosphatidylinositol 3- and 4-kinase
Length = 533
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 305 MGSRISKDVCRGKSEIDVLS*LC 373
+G ++++D+CRG+ VL LC
Sbjct: 359 IGEKMTRDICRGEESSSVLEILC 381
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,713,508
Number of Sequences: 28952
Number of extensions: 284644
Number of successful extensions: 613
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -