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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0993
         (723 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124395-1|BAC85845.1| 1235|Homo sapiens protein ( Homo sapiens ...    31   5.5  
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun...    30   9.6  
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.         30   9.6  
BC018906-1|AAH18906.1|  456|Homo sapiens B-cell linker protein.        30   9.6  
AM180337-1|CAJ55331.1|  404|Homo sapiens B-cell linker protein p...    30   9.6  
AM180336-1|CAJ55330.1|  421|Homo sapiens B-cell linker protein p...    30   9.6  
AK097078-1|BAC04942.1|  666|Homo sapiens protein ( Homo sapiens ...    30   9.6  
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p...    30   9.6  
AF180756-1|AAF20382.1|  456|Homo sapiens B cell linker protein B...    30   9.6  
AF068180-1|AAC39936.1|  456|Homo sapiens B cell linker protein B...    30   9.6  
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.     30   9.6  

>AK124395-1|BAC85845.1| 1235|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42404 fis, clone ASTRO3000301, highly  similar
           to Human G2 protein. ).
          Length = 1235

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 531 TPTVTAPDADPFPTSPPLPT 590
           +P +TAP  +P P+ PPLP+
Sbjct: 312 SPIITAPRTNPLPSGPPLPS 331


>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
           protein.
          Length = 1020

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 260 KPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSTEE 364
           K  A   +   SP  A +P+KEEA   P AKS E+
Sbjct: 535 KEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEK 569


>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 260 KPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSTEE 364
           K  A   +   SP  A +P+KEEA   P AKS E+
Sbjct: 535 KEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEK 569


>BC018906-1|AAH18906.1|  456|Homo sapiens B-cell linker protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = +2

Query: 608 RSTSPRY--PCHPSGAVSLANIGVKPTKSKPVAEPDP 712
           RST P    P  P G  S  N G   TKS P A P P
Sbjct: 208 RSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAPSP 244


>AM180337-1|CAJ55331.1|  404|Homo sapiens B-cell linker protein
           protein.
          Length = 404

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = +2

Query: 608 RSTSPRY--PCHPSGAVSLANIGVKPTKSKPVAEPDP 712
           RST P    P  P G  S  N G   TKS P A P P
Sbjct: 208 RSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAPSP 244


>AM180336-1|CAJ55330.1|  421|Homo sapiens B-cell linker protein
           protein.
          Length = 421

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = +2

Query: 608 RSTSPRY--PCHPSGAVSLANIGVKPTKSKPVAEPDP 712
           RST P    P  P G  S  N G   TKS P A P P
Sbjct: 208 RSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAPSP 244


>AK097078-1|BAC04942.1|  666|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39759 fis, clone SMINT2019153, weakly similar to
           ATP-DEPENDENT RNA HELICASE DBP73D. ).
          Length = 666

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 269 AAGDSSTDSPPLANTPSKEEAPVVPAAKSTEEAAQE 376
           A  +S+ ++P   +  S EEAP  P+A S+EEA  E
Sbjct: 99  AGAESNEEAPGEPSAGSSEEAPGEPSAGSSEEAPGE 134


>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
           protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 260 KPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSTEE 364
           K  A   +   SP  A +P+KEEA   P AKS E+
Sbjct: 535 KEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEK 569


>AF180756-1|AAF20382.1|  456|Homo sapiens B cell linker protein BLNK
           protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = +2

Query: 608 RSTSPRY--PCHPSGAVSLANIGVKPTKSKPVAEPDP 712
           RST P    P  P G  S  N G   TKS P A P P
Sbjct: 208 RSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAPSP 244


>AF068180-1|AAC39936.1|  456|Homo sapiens B cell linker protein BLNK
           protein.
          Length = 456

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = +2

Query: 608 RSTSPRY--PCHPSGAVSLANIGVKPTKSKPVAEPDP 712
           RST P    P  P G  S  N G   TKS P A P P
Sbjct: 208 RSTKPNSSTPASPPGTASGRNSGAWETKSPPPAAPSP 244


>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
          Length = 1034

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 260 KPAAAGDSSTDSPPLANTPSKEEAPVVPAAKSTEE 364
           K  A   +   SP  A +P+KEEA   P AKS E+
Sbjct: 543 KEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEK 577


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,074,981
Number of Sequences: 237096
Number of extensions: 1332175
Number of successful extensions: 6304
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6284
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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