Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0992
(680 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D5692F Cluster: PREDICTED: similar to CCR4-NOT t... 75 2e-12
UniRef50_UPI0000DB7515 Cluster: PREDICTED: similar to CCR4-NOT t... 66 6e-10
UniRef50_Q9H8X1 Cluster: CCR4-NOT transcription complex subunit ... 60 4e-08
UniRef50_UPI0000E48F41 Cluster: PREDICTED: hypothetical protein;... 60 6e-08
UniRef50_UPI00015B6411 Cluster: PREDICTED: similar to CG2852-PA;... 48 3e-04
UniRef50_A7T0U2 Cluster: Predicted protein; n=1; Nematostella ve... 47 4e-04
UniRef50_Q54U17 Cluster: Putative uncharacterized protein; n=1; ... 37 0.52
UniRef50_Q6CNY0 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 36 0.69
UniRef50_A4Q7K5 Cluster: Immunoglobulin/major histocompatibility... 36 0.91
UniRef50_Q8EZH7 Cluster: TPR-repeat-containing proteins; n=4; Le... 36 1.2
UniRef50_Q83ZD5 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q233J3 Cluster: DNA polymerase family B containing prot... 35 1.6
UniRef50_Q59R01 Cluster: Potential mRNA deadenylase and CCR4-NOT... 35 2.1
UniRef50_UPI00015B4D48 Cluster: PREDICTED: similar to bap28; n=1... 34 2.8
UniRef50_Q5WE70 Cluster: Bacteriophage SPBc2 related protein; n=... 34 2.8
UniRef50_Q4SEP7 Cluster: Chromosome 3 SCAF14614, whole genome sh... 34 3.7
UniRef50_A5FD54 Cluster: TonB-dependent receptor; n=1; Flavobact... 33 6.4
UniRef50_Q5CRF7 Cluster: Forkhead associated domain (FHA) contai... 33 6.4
UniRef50_Q815Q9 Cluster: Transcriptional regulator, MerR family;... 33 8.5
UniRef50_A6PN43 Cluster: Putative uncharacterized protein precur... 33 8.5
UniRef50_A3JQV4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_Q6FNN6 Cluster: Candida glabrata strain CBS138 chromoso... 33 8.5
>UniRef50_UPI0000D5692F Cluster: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 10; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 10 - Tribolium castaneum
Length = 663
Score = 74.5 bits (175), Expect = 2e-12
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Frame = +3
Query: 48 FLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSGLNYL 227
F K +Y ALQ ++ L+N T++ +V HNKA+VE+ + + E F+ +T + N +
Sbjct: 29 FKKNNYAGALQFINKLDNR--TNDFKVAHNKALVEYCKSDFRKNETFQKNLTSIC--NQI 84
Query: 228 DVEVKDMTSPCLL-YNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEAT 404
++ D C++ YN A++L+H + Y + I++++ D L +Q+ L +E
Sbjct: 85 RLDKLDDVDQCIVHYNQAILLYHQQQYTNAIYIMDRVYKFIEPMDDALAKQVSLFAIELQ 144
Query: 405 ICRRTYDKTIEIAKNHGEPLKINNEVS-ELFERIISRAQLLVGQKVKLNLKPDSIENIFV 581
+C R DK + + N+ E IN + +L ++ + Q + ++ + I
Sbjct: 145 LCVRQSDKALSLI-NYLENQLINGTPNIKLLDKTVKEKDKKAPQPLDPAMEEFKKKLIKY 203
Query: 582 IAQQHYINGNV----KEAANILGILQNLK 656
+ + +N N+ KE +N+L QN +
Sbjct: 204 KIRCYLMNHNLEIANKEISNLLKDKQNFQ 232
>UniRef50_UPI0000DB7515 Cluster: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 10; n=1; Apis
mellifera|Rep: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 10 - Apis mellifera
Length = 715
Score = 66.5 bits (155), Expect = 6e-10
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 25/221 (11%)
Frame = +3
Query: 48 FLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG-LNY 224
F K Y L +L+ LE L + +V HNK VVE ++K E + ++ + G ++
Sbjct: 32 FQKGSYANCLSYLNKLETL-RPKDLKVMHNKVVVECYKNDLKKTELLRKSLNAICGQMST 90
Query: 225 LD-VEVKDMTSPCLL-YNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLE 398
+D E D C++ YN AV+L+HS+ Y + I+ +L + + L ++ LL++E
Sbjct: 91 IDSTETIDDIEKCVMRYNQAVLLYHSKQYNAALQIMNRLFAFIEPMEESLAHKVCLLLIE 150
Query: 399 ATICRRTYDKTIE---------IAKNHGEPLKINNEVSELFE----RIISRAQLLVGQ-- 533
I D + I+ ++ + ++ E ++ F+ + +R L++ Q
Sbjct: 151 LHIITEQPDAALSLINYIESQLISTDNSKISSVDKEATDAFKLKLLKCKARIYLMMHQLK 210
Query: 534 ------KVKLNL-KPDSIENIFVIAQQHYINGNVKEAANIL 635
K ++L P +I +F+ A Y+ GN K+A +L
Sbjct: 211 LCKREWKTLVSLGTPVNISTVFLKANLEYLRGNYKKAIKLL 251
>UniRef50_Q9H8X1 Cluster: CCR4-NOT transcription complex subunit 10;
n=51; Euteleostomi|Rep: CCR4-NOT transcription complex
subunit 10 - Homo sapiens (Human)
Length = 744
Score = 60.5 bits (140), Expect = 4e-08
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Frame = +3
Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL
Sbjct: 34 AFQAFTSGNYDACLQHLARLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92
Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
+ VE + D+ + L YN AVIL+H R Y + + + EKL + + Q +
Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152
Query: 384 LLMLEATICRRTYDKTIEI 440
L+++ I +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171
>UniRef50_UPI0000E48F41 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 824
Score = 59.7 bits (138), Expect = 6e-08
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Frame = +3
Query: 12 DRDEPAFLAHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFK 191
+ + A AH F +Y ++ + L N+ T K VQHN AV F + V++++
Sbjct: 31 EEKDVATAAHSHFEAGNYNGCVEQVRKLANMRPTDPK-VQHNLAVALFYQSGCRKVDEYR 89
Query: 192 NAITQLSGLNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKD 359
++ + ++D+E + D +N AV+L H R ++Q + +LEKL +
Sbjct: 90 RSLGNVCSQVHVDLEQIDSLGDADQAIFFFNNAVLLHHLRQHHQAIRVLEKLFQVIEPLE 149
Query: 360 ARLLQQIILLMLEATICRRTYDKTI 434
+ +I+LL++E+ + DK +
Sbjct: 150 EWVAVRILLLLIESYLITHQPDKAL 174
>UniRef50_UPI00015B6411 Cluster: PREDICTED: similar to CG2852-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG2852-PA - Nasonia vitripennis
Length = 639
Score = 47.6 bits (108), Expect = 3e-04
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Frame = +3
Query: 3 NNKDRDEPAFLAHQC---FLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAG--- 164
NN ++ LA + F++ D+ A L LE L + +V HNK + +F
Sbjct: 25 NNPVSEQERELAREALAEFVRADFQACSAILEKLEAL-RPQDLKVTHNKIISDFYRSCEP 83
Query: 165 -EMKNVEKFKNAITQLSGLNYLDVEVKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLS 341
M+ + K NAI + N E ++ L YN AVILFHS+ Y + I+ + +
Sbjct: 84 QRMEILRKSLNAIDVVRPSNAQSSESEEAERSMLKYNQAVILFHSKKYRAALDIVTSIFA 143
Query: 342 SKSIKDARLLQQIILLMLE 398
+ + +I +++LE
Sbjct: 144 LNEPLEECFVHKICMILLE 162
>UniRef50_A7T0U2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 683
Score = 47.2 bits (107), Expect = 4e-04
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Frame = +3
Query: 21 EPAFLAHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAI 200
E A AH + + Y +L LS L N + ++ +V HNKA++++ + ++F N +
Sbjct: 7 ELANQAHIEYEGQQYDKSLAALSKL-NEMRPNDYKVVHNKAIIQYCLTGLTRTDEFFNHL 65
Query: 201 TQL-------SGLNYLDVEVKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKD 359
L SG + + +V DM +LYN AV+ ++ + Y + L KL D
Sbjct: 66 ATLRKKIEHESGDSKDESDVLDMV--YVLYNEAVVCYNLQQYNNASIALGKLFKVIEPLD 123
Query: 360 ARLLQQIILLMLEATICRRTYDKTIEIAKNHGEPLKINNEVSE 488
L ++ L+ E + DK + + L +NN+ ++
Sbjct: 124 ENLSFKVCFLLTELYLIMHKPDKASAVLNHIENVLMVNNKQAD 166
>UniRef50_Q54U17 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 934
Score = 36.7 bits (81), Expect = 0.52
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = +3
Query: 234 EVKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEATICR 413
++ D +LYN AVI F+ + + ILE+L S D L +I LL + TI
Sbjct: 140 DLLDNEQALILYNQAVIYFNIKQHGSSYKILEQLFSQVLSFDDFLGIRICLLFINVTIEG 199
Query: 414 RTYDKTIEI 440
+ YDK I
Sbjct: 200 QLYDKAYSI 208
>UniRef50_Q6CNY0 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 722
Score = 36.3 bits (80), Expect = 0.69
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +3
Query: 399 ATICRRTYDKTIEIAKNH---GEPLKINNEVSELFERIISRAQLLVGQKVKLNLKPDSIE 569
A I RRT + E + +++ NEVSE+ +R+++ + L+ L DSI+
Sbjct: 473 ANILRRTAQRIFEETDQYYIVDSDIELTNEVSEVDQRLMNGVEWLIEN----GLYTDSID 528
Query: 570 NIFVIAQQHYINGNVK 617
I ++++ ING VK
Sbjct: 529 TIIALSRRFLINGKVK 544
>UniRef50_A4Q7K5 Cluster: Immunoglobulin/major histocompatibility
complex; Tetratricopeptide- like helical; n=2; core
eudicotyledons|Rep: Immunoglobulin/major
histocompatibility complex; Tetratricopeptide- like
helical - Medicago truncatula (Barrel medic)
Length = 857
Score = 35.9 bits (79), Expect = 0.91
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +3
Query: 204 QLSGLNYLDVEVKD-MTSPCLLYNYAVILFHSRYYYQCVVILEKLLSS-KSIKDARLLQQ 377
Q SG+N D D + S N A+I FH Y + V +LE L IK++ L
Sbjct: 133 QFSGVNSTDTMHPDELDSSVATLNIAIIWFHLHDYAKTVSVLEPLFQKIDPIKESTAL-H 191
Query: 378 IILLMLEATICRRTYDKTIEI 440
I LL+L+A++ K+ ++
Sbjct: 192 ICLLLLDASLACHDASKSADV 212
>UniRef50_Q8EZH7 Cluster: TPR-repeat-containing proteins; n=4;
Leptospira|Rep: TPR-repeat-containing proteins -
Leptospira interrogans
Length = 235
Score = 35.5 bits (78), Expect = 1.2
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Frame = +3
Query: 207 LSGLNYLDVEVKDMTS-PCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
L L +D E+ P L YN+A+ + Y +CV ILE+LL R + I
Sbjct: 27 LFALTLIDREISSGNEDPELYYNFAICCARTDNYKKCVSILEELLEKFPRFGER--ENSI 84
Query: 384 LLMLEATICRRTY----DKTIEIAKNHGEPLKINNEVSELFERIISRAQLLVGQKVKLNL 551
L+++ A I + Y DK E K + LKI + + E+ + + K L L
Sbjct: 85 LMIVYALIQNKEYSKALDKCEERLKFQVDDLKILSMKAFALEKSGKVEEAIEIHKRILRL 144
Query: 552 KPD 560
+PD
Sbjct: 145 RPD 147
>UniRef50_Q83ZD5 Cluster: Putative uncharacterized protein; n=1;
Staphylococcus aureus|Rep: Putative uncharacterized
protein - Staphylococcus aureus
Length = 355
Score = 35.5 bits (78), Expect = 1.2
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Frame = +3
Query: 138 KAVVEFMAGEMKNVEKFKNAITQLSGLNYLDVEVKDMTSPCLLYNYAVILFHSRYYYQCV 317
K + E + M +E + N QL L YL+++ +LYN + + H Y+
Sbjct: 156 KNLYELYSYFMDEIENYSNDFEQLRALLYLELDYS-----FVLYNELLRMIHLIKKYKLA 210
Query: 318 V---ILEKLLSSKSIKDARL-LQQIILLMLEATICRRTYDKTIEIAKNHGEPLKINNEVS 485
I+EK + S+K A + + L++L A I I N + IN +
Sbjct: 211 ANSKIIEKAIGEISMKLANIEFPWLRLVVLRAFIDNIKKYHDINSLINDISHI-INYTLF 269
Query: 486 ELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKE 620
E+ E+ I RA++ G + +N+K + + I + Y ++KE
Sbjct: 270 EI-EQWIERAEIEEGIRDLMNVKYGRVPYLDAIIENRYKRNSIKE 313
>UniRef50_Q233J3 Cluster: DNA polymerase family B containing protein;
n=2; Tetrahymena thermophila SB210|Rep: DNA polymerase
family B containing protein - Tetrahymena thermophila
SB210
Length = 2315
Score = 35.1 bits (77), Expect = 1.6
Identities = 19/90 (21%), Positives = 44/90 (48%)
Frame = +3
Query: 354 KDARLLQQIILLMLEATICRRTYDKTIEIAKNHGEPLKINNEVSELFERIISRAQLLVGQ 533
+D L Q+++L +E + D + N+ N +++ +E + + +
Sbjct: 2061 QDFNALIQLVVLCIERGMIEEAKDYLQKCLLNNNLDYDACNGIAQCYEALGMIEEAIFWC 2120
Query: 534 KVKLNLKPDSIENIFVIAQQHYINGNVKEA 623
+ L + P+S++ + IA H++NGN +E+
Sbjct: 2121 EKALKINPNSVDVLSNIALLHFMNGNTEES 2150
>UniRef50_Q59R01 Cluster: Potential mRNA deadenylase and CCR4-NOT
complex subunit Cdc39p; n=3; Saccharomycetales|Rep:
Potential mRNA deadenylase and CCR4-NOT complex subunit
Cdc39p - Candida albicans (Yeast)
Length = 2016
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 321 ILEKLLSSKSIKDARLLQQIILLMLEATICRRTYDKTIEIAKNHGEPLKINNEVSELF 494
+LEK+ SS + DA+ L+ + LL+L TY + I H E + N E S F
Sbjct: 411 LLEKIKSSNGVVDAKTLRNLQLLLL------TTYPRLINFGNGHDEAILANEEKSPFF 462
>UniRef50_UPI00015B4D48 Cluster: PREDICTED: similar to bap28; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to bap28 -
Nasonia vitripennis
Length = 2042
Score = 34.3 bits (75), Expect = 2.8
Identities = 25/123 (20%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Frame = +3
Query: 51 LKKDYTAALQHL---SDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSGLN 221
L+K++ A L + ++++++ T+ + V+ + + E+K + + ++ S N
Sbjct: 1036 LQKEFLAKLVDIVTDCEIDSILSTTTRLVKKLHIDAQLVVDELKMMTDLEEETSE-SNRN 1094
Query: 222 YLDVEVKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEA 401
+ K S + Y + HSR + + + +LE L S +I++ +LL ++ +L++
Sbjct: 1095 RASLRKKRSISR-ISNRYNPEIVHSRKWKRGITLLEFLQHSNNIENEQLLVPVLFDLLKS 1153
Query: 402 TIC 410
++C
Sbjct: 1154 SLC 1156
>UniRef50_Q5WE70 Cluster: Bacteriophage SPBc2 related protein; n=1;
Bacillus clausii KSM-K16|Rep: Bacteriophage SPBc2
related protein - Bacillus clausii (strain KSM-K16)
Length = 379
Score = 34.3 bits (75), Expect = 2.8
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +3
Query: 420 YDKTIEIAKNHGEPLKINNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHY 599
Y +E A H E + I N+VS F +++ A L+ GQ + K +SI+NI A+
Sbjct: 215 YKNDVETALEHTEYV-IKNKVSPTF--LVASAHLIRGQAQMYDRKEESIQNIRTAAKLFK 271
Query: 600 INGNVKEAANIL 635
+ G A N+L
Sbjct: 272 LAGYSDYAQNLL 283
>UniRef50_Q4SEP7 Cluster: Chromosome 3 SCAF14614, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF14614, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 773
Score = 33.9 bits (74), Expect = 3.7
Identities = 23/83 (27%), Positives = 43/83 (51%)
Frame = +3
Query: 288 FHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEATICRRTYDKTIEIAKNHGEPLK 467
F Y + + L+KL+ + R+LQQ L+L +R + + +NHG+ ++
Sbjct: 133 FQEDIYQKPMEELDKLVEKQRETQGRMLQQ---LLLAERAHQRALLRLEDEKRNHGDFVR 189
Query: 468 INNEVSELFERIISRAQLLVGQK 536
++E + L E+ R +LLV Q+
Sbjct: 190 KSDEFTNLLEQERERLKLLVDQE 212
>UniRef50_A5FD54 Cluster: TonB-dependent receptor; n=1;
Flavobacterium johnsoniae UW101|Rep: TonB-dependent
receptor - Flavobacterium johnsoniae UW101
Length = 1077
Score = 33.1 bits (72), Expect = 6.4
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +3
Query: 51 LKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSGLNYLD 230
LKKD + + LSDL+ + + +R ++N AV A + K K + ++GL+
Sbjct: 73 LKKDNVSIDEILSDLQKMTNLNFRRNENNIAVNSKDADKKKKKGKITGKVVDINGLSLPG 132
Query: 231 VEVK 242
V +K
Sbjct: 133 VNIK 136
>UniRef50_Q5CRF7 Cluster: Forkhead associated domain (FHA)
containing protein; n=2; Cryptosporidium|Rep: Forkhead
associated domain (FHA) containing protein -
Cryptosporidium parvum Iowa II
Length = 263
Score = 33.1 bits (72), Expect = 6.4
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 171 KNVEKFKNAITQLSGLNYLDVEVKDMTSPCLLYNYAV--ILFHSRYYYQCVVILEKLLSS 344
+ +E + + TQ S NYL+ E+KD+ S L N + I+ +S V ILE++ +
Sbjct: 71 RKIESSQESYTQNSNFNYLNNEIKDINSKIELINSNIENIITNSGNLSNPVCILEQIPTD 130
Query: 345 KSIKDARLLQQI 380
++L Q+
Sbjct: 131 NKNSGKKVLIQV 142
>UniRef50_Q815Q9 Cluster: Transcriptional regulator, MerR family;
n=1; Bacillus cereus ATCC 14579|Rep: Transcriptional
regulator, MerR family - Bacillus cereus (strain ATCC
14579 / DSM 31)
Length = 123
Score = 32.7 bits (71), Expect = 8.5
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Frame = +3
Query: 297 RYYYQC-VVILEKLLSSKSIKDARLLQQIILLMLEATICRRTYDKTIEIAKNHGEPLKIN 473
RYY + ++ILEK + + D LLQ I + +++ T + K I++ K + +N
Sbjct: 19 RYYEELGLLILEKQNGKRILNDENLLQLIKIFLMKITNKKLKDIKDIDLEKL--QLTLLN 76
Query: 474 NEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQ--HYINGNV 614
E++ L +++I + L G L+ ++E F + ++ +YIN NV
Sbjct: 77 QEINLLCQQLIGLSLTLEGL-----LEETNVEREFQLLKELNNYININV 120
>UniRef50_A6PN43 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 392
Score = 32.7 bits (71), Expect = 8.5
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 171 KNVEKFKNAITQLSGLNYLDVEVKDMTSPCLLYNYA---VILFHSRYY 305
K V+K + SG LD+ V DMT+PC + YA FHSR Y
Sbjct: 321 KEVQKMNDFERLYSGAAKLDIPVWDMTTPCYNWLYASGKPYEFHSRDY 368
>UniRef50_A3JQV4 Cluster: Putative uncharacterized protein; n=1;
Rhodobacterales bacterium HTCC2150|Rep: Putative
uncharacterized protein - Rhodobacterales bacterium
HTCC2150
Length = 650
Score = 32.7 bits (71), Expect = 8.5
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +3
Query: 414 RTYDKTIEIAKNHGEPLKINNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQ 593
RTY+K +E+A + I + ER L K+ LN+ P+ + IA
Sbjct: 215 RTYEKAMELAPRRAD---IAYNRAHALERAGRYEAALEFYKISLNINPNQASALNNIAVI 271
Query: 594 HYINGNVKEA 623
H + GN KEA
Sbjct: 272 HKMQGNKKEA 281
>UniRef50_Q6FNN6 Cluster: Candida glabrata strain CBS138 chromosome
J complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome J complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 659
Score = 32.7 bits (71), Expect = 8.5
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 498 RIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQNL 653
RI+++A LL + ++ K D ++NI+ + NGN K AA G N+
Sbjct: 119 RILNKA-LLRNNDINISKKRDGVKNIYSVLNPMNNNGNNKSAATTFGTTTNI 169
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,279,671
Number of Sequences: 1657284
Number of extensions: 11874103
Number of successful extensions: 29098
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 28169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29083
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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