Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0992
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.3  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   7.1  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 4/19 (21%), Positives = 14/19 (73%)
 Frame = -1

Query: 614 YITIDVMLLCYNKYVLYGI 558
           ++ + V +LC++ Y+++ +
Sbjct: 254 FVIVSVFILCWSPYIIFDL 272


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 280 LFCSIHVIIINVLSY 324
           LFC ++V++++ L+Y
Sbjct: 173 LFCVLYVVLLHFLTY 187


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 280 LFCSIHVIIINVLSY 324
           LFC ++V++++ L+Y
Sbjct: 173 LFCVLYVVLLHFLTY 187


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 497 KDYITCSIISWPKSKI 544
           +D++TC+ +  PKS I
Sbjct: 88  EDFVTCNGLKLPKSTI 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,609
Number of Sequences: 336
Number of extensions: 3300
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)