BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0992 (680 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 27 0.55 AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 24 3.9 AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR ... 24 3.9 AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 23 8.9 >M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. Length = 613 Score = 27.1 bits (57), Expect = 0.55 Identities = 19/73 (26%), Positives = 33/73 (45%) Frame = +3 Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICRRTYDKTIEIAKNHGEPLKINNEVSELFERI 503 L +L ++S +LQQI ++ EA CR + + N +PL E++ L E Sbjct: 432 LLRLTLARSANATLILQQIRTIIGEAGTCRHVTEMA-ALVVNDIDPLAKEEELTALLENK 490 Query: 504 ISRAQLLVGQKVK 542 I +V ++ Sbjct: 491 IEGGAGIVSTSIR 503 >AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. Length = 565 Score = 24.2 bits (50), Expect = 3.9 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Frame = -1 Query: 203 CNGIFEFFH--ILHLSSHKLYNGFVVLNPFIRSSHKVFQVAKML*CRC 66 CN + + + IL L L F VL FI S +FQ A++L C C Sbjct: 30 CNPLSTYLYRTILALRLVTLLPCFNVLT-FISSFFSLFQTARVLTCYC 76 >AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR protein. Length = 640 Score = 24.2 bits (50), Expect = 3.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -1 Query: 641 YPQYISCFLYITIDVMLLCYNKYVLY 564 Y Q S FLYITI V + N VL+ Sbjct: 134 YFQLTSYFLYITIFVTAVIGNSIVLF 159 >AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase protein. Length = 1253 Score = 23.0 bits (47), Expect = 8.9 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +1 Query: 220 IIWTSKSRI*LHPVCCIITRLFCSIHV 300 IIWT+ + I +C I ++ C I + Sbjct: 31 IIWTTVTHILCAYLCYIFSKFACKIQI 57 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 672,032 Number of Sequences: 2352 Number of extensions: 13130 Number of successful extensions: 63 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 63 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 68577420 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -