Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0992
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   0.55 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   3.9  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   3.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.9  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 19/73 (26%), Positives = 33/73 (45%)
 Frame = +3

Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICRRTYDKTIEIAKNHGEPLKINNEVSELFERI 503
           L +L  ++S     +LQQI  ++ EA  CR   +    +  N  +PL    E++ L E  
Sbjct: 432 LLRLTLARSANATLILQQIRTIIGEAGTCRHVTEMA-ALVVNDIDPLAKEEELTALLENK 490

Query: 504 ISRAQLLVGQKVK 542
           I     +V   ++
Sbjct: 491 IEGGAGIVSTSIR 503


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 203 CNGIFEFFH--ILHLSSHKLYNGFVVLNPFIRSSHKVFQVAKML*CRC 66
           CN +  + +  IL L    L   F VL  FI S   +FQ A++L C C
Sbjct: 30  CNPLSTYLYRTILALRLVTLLPCFNVLT-FISSFFSLFQTARVLTCYC 76


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 641 YPQYISCFLYITIDVMLLCYNKYVLY 564
           Y Q  S FLYITI V  +  N  VL+
Sbjct: 134 YFQLTSYFLYITIFVTAVIGNSIVLF 159


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 220 IIWTSKSRI*LHPVCCIITRLFCSIHV 300
           IIWT+ + I    +C I ++  C I +
Sbjct: 31  IIWTTVTHILCAYLCYIFSKFACKIQI 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,032
Number of Sequences: 2352
Number of extensions: 13130
Number of successful extensions: 63
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)