BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0992 (680 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AK023227-1|BAB14478.1| 744|Homo sapiens protein ( Homo sapiens ... 60 5e-09 BC002931-1|AAH02931.1| 744|Homo sapiens CCR4-NOT transcription ... 60 7e-09 BC002928-1|AAH02928.1| 717|Homo sapiens CNOT10 protein protein. 60 7e-09 AK022952-1|BAB14327.1| 744|Homo sapiens protein ( Homo sapiens ... 60 7e-09 AK022576-1|BAB14108.1| 743|Homo sapiens protein ( Homo sapiens ... 56 1e-07 AK021695-1|BAB13876.1| 595|Homo sapiens protein ( Homo sapiens ... 36 0.10 X76732-1|CAA54148.1| 420|Homo sapiens NEFA protein protein. 31 5.0 AF450266-1|AAM73810.1| 419|Homo sapiens NUCB2 protein protein. 31 5.0 AF052644-1|AAC06302.1| 420|Homo sapiens DNA binding protein NEF... 31 5.0 AF052643-1|AAC06301.1| 420|Homo sapiens DNA binding protein NEF... 31 5.0 AF052642-1|AAC06300.1| 420|Homo sapiens DNA binding protein NEF... 31 5.0 BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 30 8.8 BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 30 8.8 AK092024-1|BAC03793.1| 699|Homo sapiens protein ( Homo sapiens ... 30 8.8 AK000990-1|BAA91457.1| 535|Homo sapiens protein ( Homo sapiens ... 30 8.8 AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 30 8.8 AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 30 8.8 >AK023227-1|BAB14478.1| 744|Homo sapiens protein ( Homo sapiens cDNA FLJ13165 fis, clone NT2RP3003686. ). Length = 744 Score = 60.5 bits (140), Expect = 5e-09 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%) Frame = +3 Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215 A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL Sbjct: 34 AFQAFTSGNYDACLQHLARLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92 Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383 + VE + D+ + L YN AVIL+H R Y + + + EKL + + Q + Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152 Query: 384 LLMLEATICRRTYDKTIEI 440 L+++ I +K + + Sbjct: 153 FLLVDLYILTYQAEKALHL 171 >BC002931-1|AAH02931.1| 744|Homo sapiens CCR4-NOT transcription complex, subunit 10 protein. Length = 744 Score = 60.1 bits (139), Expect = 7e-09 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%) Frame = +3 Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215 A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL Sbjct: 34 AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92 Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383 + VE + D+ + L YN AVIL+H R Y + + + EKL + + Q + Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152 Query: 384 LLMLEATICRRTYDKTIEI 440 L+++ I +K + + Sbjct: 153 FLLVDLYILTYQAEKALHL 171 >BC002928-1|AAH02928.1| 717|Homo sapiens CNOT10 protein protein. Length = 717 Score = 60.1 bits (139), Expect = 7e-09 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%) Frame = +3 Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215 A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL Sbjct: 34 AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92 Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383 + VE + D+ + L YN AVIL+H R Y + + + EKL + + Q + Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152 Query: 384 LLMLEATICRRTYDKTIEI 440 L+++ I +K + + Sbjct: 153 FLLVDLYILTYQAEKALHL 171 >AK022952-1|BAB14327.1| 744|Homo sapiens protein ( Homo sapiens cDNA FLJ12890 fis, clone NT2RP2004124. ). Length = 744 Score = 60.1 bits (139), Expect = 7e-09 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%) Frame = +3 Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215 A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL Sbjct: 34 AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92 Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383 + VE + D+ + L YN AVIL+H R Y + + + EKL + + Q + Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152 Query: 384 LLMLEATICRRTYDKTIEI 440 L+++ I +K + + Sbjct: 153 FLLVDLYILTYQAEKALHL 171 >AK022576-1|BAB14108.1| 743|Homo sapiens protein ( Homo sapiens cDNA FLJ12514 fis, clone NT2RM2001768. ). Length = 743 Score = 56.0 bits (129), Expect = 1e-07 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 4/104 (3%) Frame = +3 Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215 A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL Sbjct: 34 AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92 Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKL 335 + VE + D+ + L YN AVIL+H R Y + + + EKL Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKL 136 >AK021695-1|BAB13876.1| 595|Homo sapiens protein ( Homo sapiens cDNA FLJ11633 fis, clone HEMBA1004274. ). Length = 595 Score = 36.3 bits (80), Expect = 0.10 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = +3 Query: 243 DMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEATICRRTY 422 D+ + L YN AVIL+H R Y + + + EKL + + Q + L+++ I Sbjct: 6 DVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQA 65 Query: 423 DKTIEI 440 +K + + Sbjct: 66 EKALHL 71 >X76732-1|CAA54148.1| 420|Homo sapiens NEFA protein protein. Length = 420 Score = 30.7 bits (66), Expect = 5.0 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +3 Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647 + NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + + Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358 Query: 648 N 650 N Sbjct: 359 N 359 >AF450266-1|AAM73810.1| 419|Homo sapiens NUCB2 protein protein. Length = 419 Score = 30.7 bits (66), Expect = 5.0 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +3 Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647 + NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + + Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358 Query: 648 N 650 N Sbjct: 359 N 359 >AF052644-1|AAC06302.1| 420|Homo sapiens DNA binding protein NEFA precursor protein. Length = 420 Score = 30.7 bits (66), Expect = 5.0 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +3 Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647 + NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + + Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358 Query: 648 N 650 N Sbjct: 359 N 359 >AF052643-1|AAC06301.1| 420|Homo sapiens DNA binding protein NEFA precursor protein. Length = 420 Score = 30.7 bits (66), Expect = 5.0 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +3 Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647 + NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + + Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358 Query: 648 N 650 N Sbjct: 359 N 359 >AF052642-1|AAC06300.1| 420|Homo sapiens DNA binding protein NEFA precursor protein. Length = 420 Score = 30.7 bits (66), Expect = 5.0 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +3 Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647 + NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + + Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358 Query: 648 N 650 N Sbjct: 359 N 359 >BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with coiled-coil domains and ankyrin repeats protein. Length = 1416 Score = 29.9 bits (64), Expect = 8.8 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%) Frame = +3 Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500 L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + + Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759 Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572 II +R L V QK KL ++ +EN Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789 >BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with coiled-coil domains and ankyrin repeats protein. Length = 1416 Score = 29.9 bits (64), Expect = 8.8 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%) Frame = +3 Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500 L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + + Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759 Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572 II +R L V QK KL ++ +EN Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789 >AK092024-1|BAC03793.1| 699|Homo sapiens protein ( Homo sapiens cDNA FLJ34705 fis, clone MESAN2003035, highly similar to Mus musculus diaphanous-related formin (Dia2) mRNA. ). Length = 699 Score = 29.9 bits (64), Expect = 8.8 Identities = 21/58 (36%), Positives = 31/58 (53%) Frame = +3 Query: 432 IEIAKNHGEPLKINNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYIN 605 +E+ +N +PL NE+ ELFER++ L +K L K SI+ V+ YIN Sbjct: 107 LEMMENFPKPLS-ENELLELFERMMEDMNLNEDKKAPLREKDFSIKKEMVM---QYIN 160 >AK000990-1|BAA91457.1| 535|Homo sapiens protein ( Homo sapiens cDNA FLJ10128 fis, clone HEMBA1002997, weakly similar to CENTROMERIC PROTEIN E. ). Length = 535 Score = 29.9 bits (64), Expect = 8.8 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%) Frame = +3 Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500 L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + + Sbjct: 49 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 107 Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572 II +R L V QK KL ++ +EN Sbjct: 108 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 137 >AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. Length = 1416 Score = 29.9 bits (64), Expect = 8.8 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%) Frame = +3 Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500 L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + + Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759 Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572 II +R L V QK KL ++ +EN Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789 >AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. Length = 1416 Score = 29.9 bits (64), Expect = 8.8 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%) Frame = +3 Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500 L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + + Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759 Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572 II +R L V QK KL ++ +EN Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 89,817,611 Number of Sequences: 237096 Number of extensions: 1793309 Number of successful extensions: 3253 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3250 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7727256732 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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