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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0992
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK023227-1|BAB14478.1|  744|Homo sapiens protein ( Homo sapiens ...    60   5e-09
BC002931-1|AAH02931.1|  744|Homo sapiens CCR4-NOT transcription ...    60   7e-09
BC002928-1|AAH02928.1|  717|Homo sapiens CNOT10 protein protein.       60   7e-09
AK022952-1|BAB14327.1|  744|Homo sapiens protein ( Homo sapiens ...    60   7e-09
AK022576-1|BAB14108.1|  743|Homo sapiens protein ( Homo sapiens ...    56   1e-07
AK021695-1|BAB13876.1|  595|Homo sapiens protein ( Homo sapiens ...    36   0.10 
X76732-1|CAA54148.1|  420|Homo sapiens NEFA protein protein.           31   5.0  
AF450266-1|AAM73810.1|  419|Homo sapiens NUCB2 protein protein.        31   5.0  
AF052644-1|AAC06302.1|  420|Homo sapiens DNA binding protein NEF...    31   5.0  
AF052643-1|AAC06301.1|  420|Homo sapiens DNA binding protein NEF...    31   5.0  
AF052642-1|AAC06300.1|  420|Homo sapiens DNA binding protein NEF...    31   5.0  
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ...    30   8.8  
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ...    30   8.8  
AK092024-1|BAC03793.1|  699|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AK000990-1|BAA91457.1|  535|Homo sapiens protein ( Homo sapiens ...    30   8.8  
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.    30   8.8  
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.     30   8.8  

>AK023227-1|BAB14478.1|  744|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13165 fis, clone NT2RP3003686. ).
          Length = 744

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
 Frame = +3

Query: 36  AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
           A Q F   +Y A LQHL+ L++ +   + ++  N AV EF        +  +  + QL  
Sbjct: 34  AFQAFTSGNYDACLQHLARLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92

Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
             +  VE    + D+ +  L YN AVIL+H R Y + + + EKL       + +  Q + 
Sbjct: 93  QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152

Query: 384 LLMLEATICRRTYDKTIEI 440
            L+++  I     +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171


>BC002931-1|AAH02931.1|  744|Homo sapiens CCR4-NOT transcription
           complex, subunit 10 protein.
          Length = 744

 Score = 60.1 bits (139), Expect = 7e-09
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
 Frame = +3

Query: 36  AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
           A Q F   +Y A LQHL+ L++ +   + ++  N AV EF        +  +  + QL  
Sbjct: 34  AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92

Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
             +  VE    + D+ +  L YN AVIL+H R Y + + + EKL       + +  Q + 
Sbjct: 93  QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152

Query: 384 LLMLEATICRRTYDKTIEI 440
            L+++  I     +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171


>BC002928-1|AAH02928.1|  717|Homo sapiens CNOT10 protein protein.
          Length = 717

 Score = 60.1 bits (139), Expect = 7e-09
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
 Frame = +3

Query: 36  AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
           A Q F   +Y A LQHL+ L++ +   + ++  N AV EF        +  +  + QL  
Sbjct: 34  AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92

Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
             +  VE    + D+ +  L YN AVIL+H R Y + + + EKL       + +  Q + 
Sbjct: 93  QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152

Query: 384 LLMLEATICRRTYDKTIEI 440
            L+++  I     +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171


>AK022952-1|BAB14327.1|  744|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12890 fis, clone NT2RP2004124. ).
          Length = 744

 Score = 60.1 bits (139), Expect = 7e-09
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
 Frame = +3

Query: 36  AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
           A Q F   +Y A LQHL+ L++ +   + ++  N AV EF        +  +  + QL  
Sbjct: 34  AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92

Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
             +  VE    + D+ +  L YN AVIL+H R Y + + + EKL       + +  Q + 
Sbjct: 93  QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152

Query: 384 LLMLEATICRRTYDKTIEI 440
            L+++  I     +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171


>AK022576-1|BAB14108.1|  743|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12514 fis, clone NT2RM2001768. ).
          Length = 743

 Score = 56.0 bits (129), Expect = 1e-07
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
 Frame = +3

Query: 36  AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
           A Q F   +Y A LQHL+ L++ +   + ++  N AV EF        +  +  + QL  
Sbjct: 34  AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92

Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKL 335
             +  VE    + D+ +  L YN AVIL+H R Y + + + EKL
Sbjct: 93  QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKL 136


>AK021695-1|BAB13876.1|  595|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11633 fis, clone HEMBA1004274. ).
          Length = 595

 Score = 36.3 bits (80), Expect = 0.10
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +3

Query: 243 DMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEATICRRTY 422
           D+ +  L YN AVIL+H R Y + + + EKL       + +  Q +  L+++  I     
Sbjct: 6   DVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQA 65

Query: 423 DKTIEI 440
           +K + +
Sbjct: 66  EKALHL 71


>X76732-1|CAA54148.1|  420|Homo sapiens NEFA protein protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
           + NEV    +R+++  + L   + K  L+PDS E +    QQ +    +KE  NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358

Query: 648 N 650
           N
Sbjct: 359 N 359


>AF450266-1|AAM73810.1|  419|Homo sapiens NUCB2 protein protein.
          Length = 419

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
           + NEV    +R+++  + L   + K  L+PDS E +    QQ +    +KE  NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358

Query: 648 N 650
           N
Sbjct: 359 N 359


>AF052644-1|AAC06302.1|  420|Homo sapiens DNA binding protein NEFA
           precursor protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
           + NEV    +R+++  + L   + K  L+PDS E +    QQ +    +KE  NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358

Query: 648 N 650
           N
Sbjct: 359 N 359


>AF052643-1|AAC06301.1|  420|Homo sapiens DNA binding protein NEFA
           precursor protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
           + NEV    +R+++  + L   + K  L+PDS E +    QQ +    +KE  NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358

Query: 648 N 650
           N
Sbjct: 359 N 359


>AF052642-1|AAC06300.1|  420|Homo sapiens DNA binding protein NEFA
           precursor protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
           + NEV    +R+++  + L   + K  L+PDS E +    QQ +    +KE  NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358

Query: 648 N 650
           N
Sbjct: 359 N 359


>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
           coiled-coil domains and ankyrin repeats protein.
          Length = 1416

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
 Frame = +3

Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
           L K ++  ++K+  L ++I  + L+  + + + ++ TIE+ KNH  PLK++ ++ +  + 
Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759

Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
           II   +R  L V QK    KL ++   +EN
Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789


>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
           coiled-coil domains and ankyrin repeats protein.
          Length = 1416

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
 Frame = +3

Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
           L K ++  ++K+  L ++I  + L+  + + + ++ TIE+ KNH  PLK++ ++ +  + 
Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759

Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
           II   +R  L V QK    KL ++   +EN
Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789


>AK092024-1|BAC03793.1|  699|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34705 fis, clone MESAN2003035, highly similar to
           Mus musculus diaphanous-related formin (Dia2) mRNA. ).
          Length = 699

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +3

Query: 432 IEIAKNHGEPLKINNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYIN 605
           +E+ +N  +PL   NE+ ELFER++    L   +K  L  K  SI+   V+    YIN
Sbjct: 107 LEMMENFPKPLS-ENELLELFERMMEDMNLNEDKKAPLREKDFSIKKEMVM---QYIN 160


>AK000990-1|BAA91457.1|  535|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10128 fis, clone HEMBA1002997, weakly similar to
           CENTROMERIC PROTEIN E. ).
          Length = 535

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
 Frame = +3

Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
           L K ++  ++K+  L ++I  + L+  + + + ++ TIE+ KNH  PLK++ ++ +  + 
Sbjct: 49  LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 107

Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
           II   +R  L V QK    KL ++   +EN
Sbjct: 108 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 137


>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
          Length = 1416

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
 Frame = +3

Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
           L K ++  ++K+  L ++I  + L+  + + + ++ TIE+ KNH  PLK++ ++ +  + 
Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759

Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
           II   +R  L V QK    KL ++   +EN
Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789


>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
          Length = 1416

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
 Frame = +3

Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
           L K ++  ++K+  L ++I  + L+  + + + ++ TIE+ KNH  PLK++ ++ +  + 
Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759

Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
           II   +R  L V QK    KL ++   +EN
Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,817,611
Number of Sequences: 237096
Number of extensions: 1793309
Number of successful extensions: 3253
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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