Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0992
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK023227-1|BAB14478.1| 744|Homo sapiens protein ( Homo sapiens ... 60 5e-09
BC002931-1|AAH02931.1| 744|Homo sapiens CCR4-NOT transcription ... 60 7e-09
BC002928-1|AAH02928.1| 717|Homo sapiens CNOT10 protein protein. 60 7e-09
AK022952-1|BAB14327.1| 744|Homo sapiens protein ( Homo sapiens ... 60 7e-09
AK022576-1|BAB14108.1| 743|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AK021695-1|BAB13876.1| 595|Homo sapiens protein ( Homo sapiens ... 36 0.10
X76732-1|CAA54148.1| 420|Homo sapiens NEFA protein protein. 31 5.0
AF450266-1|AAM73810.1| 419|Homo sapiens NUCB2 protein protein. 31 5.0
AF052644-1|AAC06302.1| 420|Homo sapiens DNA binding protein NEF... 31 5.0
AF052643-1|AAC06301.1| 420|Homo sapiens DNA binding protein NEF... 31 5.0
AF052642-1|AAC06300.1| 420|Homo sapiens DNA binding protein NEF... 31 5.0
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 30 8.8
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 30 8.8
AK092024-1|BAC03793.1| 699|Homo sapiens protein ( Homo sapiens ... 30 8.8
AK000990-1|BAA91457.1| 535|Homo sapiens protein ( Homo sapiens ... 30 8.8
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 30 8.8
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 30 8.8
>AK023227-1|BAB14478.1| 744|Homo sapiens protein ( Homo sapiens
cDNA FLJ13165 fis, clone NT2RP3003686. ).
Length = 744
Score = 60.5 bits (140), Expect = 5e-09
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Frame = +3
Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL
Sbjct: 34 AFQAFTSGNYDACLQHLARLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92
Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
+ VE + D+ + L YN AVIL+H R Y + + + EKL + + Q +
Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152
Query: 384 LLMLEATICRRTYDKTIEI 440
L+++ I +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171
>BC002931-1|AAH02931.1| 744|Homo sapiens CCR4-NOT transcription
complex, subunit 10 protein.
Length = 744
Score = 60.1 bits (139), Expect = 7e-09
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Frame = +3
Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL
Sbjct: 34 AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92
Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
+ VE + D+ + L YN AVIL+H R Y + + + EKL + + Q +
Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152
Query: 384 LLMLEATICRRTYDKTIEI 440
L+++ I +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171
>BC002928-1|AAH02928.1| 717|Homo sapiens CNOT10 protein protein.
Length = 717
Score = 60.1 bits (139), Expect = 7e-09
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Frame = +3
Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL
Sbjct: 34 AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92
Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
+ VE + D+ + L YN AVIL+H R Y + + + EKL + + Q +
Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152
Query: 384 LLMLEATICRRTYDKTIEI 440
L+++ I +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171
>AK022952-1|BAB14327.1| 744|Homo sapiens protein ( Homo sapiens
cDNA FLJ12890 fis, clone NT2RP2004124. ).
Length = 744
Score = 60.1 bits (139), Expect = 7e-09
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Frame = +3
Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL
Sbjct: 34 AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92
Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQII 383
+ VE + D+ + L YN AVIL+H R Y + + + EKL + + Q +
Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVC 152
Query: 384 LLMLEATICRRTYDKTIEI 440
L+++ I +K + +
Sbjct: 153 FLLVDLYILTYQAEKALHL 171
>AK022576-1|BAB14108.1| 743|Homo sapiens protein ( Homo sapiens
cDNA FLJ12514 fis, clone NT2RM2001768. ).
Length = 743
Score = 56.0 bits (129), Expect = 1e-07
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +3
Query: 36 AHQCFLKKDYTAALQHLSDLENLVGTSNKRVQHNKAVVEFMAGEMKNVEKFKNAITQLSG 215
A Q F +Y A LQHL+ L++ + + ++ N AV EF + + + QL
Sbjct: 34 AFQAFTSGNYDACLQHLACLQD-INKDDYKIILNTAVAEFFKSNQTTTDNLRQTLNQLKN 92
Query: 216 LNYLDVE----VKDMTSPCLLYNYAVILFHSRYYYQCVVILEKL 335
+ VE + D+ + L YN AVIL+H R Y + + + EKL
Sbjct: 93 QVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKL 136
>AK021695-1|BAB13876.1| 595|Homo sapiens protein ( Homo sapiens
cDNA FLJ11633 fis, clone HEMBA1004274. ).
Length = 595
Score = 36.3 bits (80), Expect = 0.10
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 243 DMTSPCLLYNYAVILFHSRYYYQCVVILEKLLSSKSIKDARLLQQIILLMLEATICRRTY 422
D+ + L YN AVIL+H R Y + + + EKL + + Q + L+++ I
Sbjct: 6 DVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQA 65
Query: 423 DKTIEI 440
+K + +
Sbjct: 66 EKALHL 71
>X76732-1|CAA54148.1| 420|Homo sapiens NEFA protein protein.
Length = 420
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
+ NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358
Query: 648 N 650
N
Sbjct: 359 N 359
>AF450266-1|AAM73810.1| 419|Homo sapiens NUCB2 protein protein.
Length = 419
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
+ NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358
Query: 648 N 650
N
Sbjct: 359 N 359
>AF052644-1|AAC06302.1| 420|Homo sapiens DNA binding protein NEFA
precursor protein.
Length = 420
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
+ NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358
Query: 648 N 650
N
Sbjct: 359 N 359
>AF052643-1|AAC06301.1| 420|Homo sapiens DNA binding protein NEFA
precursor protein.
Length = 420
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
+ NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358
Query: 648 N 650
N
Sbjct: 359 N 359
>AF052642-1|AAC06300.1| 420|Homo sapiens DNA binding protein NEFA
precursor protein.
Length = 420
Score = 30.7 bits (66), Expect = 5.0
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 468 INNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYINGNVKEAANILGILQ 647
+ NEV +R+++ + L + K L+PDS E + QQ + +KE NI+ + +
Sbjct: 301 VMNEVDTNKDRLVTLEEFLKATEKKEFLEPDSWETL--DQQQFFTEEELKEYENIIALQE 358
Query: 648 N 650
N
Sbjct: 359 N 359
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 29.9 bits (64), Expect = 8.8
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Frame = +3
Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + +
Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759
Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
II +R L V QK KL ++ +EN
Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 29.9 bits (64), Expect = 8.8
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Frame = +3
Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + +
Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759
Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
II +R L V QK KL ++ +EN
Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789
>AK092024-1|BAC03793.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ34705 fis, clone MESAN2003035, highly similar to
Mus musculus diaphanous-related formin (Dia2) mRNA. ).
Length = 699
Score = 29.9 bits (64), Expect = 8.8
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 432 IEIAKNHGEPLKINNEVSELFERIISRAQLLVGQKVKLNLKPDSIENIFVIAQQHYIN 605
+E+ +N +PL NE+ ELFER++ L +K L K SI+ V+ YIN
Sbjct: 107 LEMMENFPKPLS-ENELLELFERMMEDMNLNEDKKAPLREKDFSIKKEMVM---QYIN 160
>AK000990-1|BAA91457.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ10128 fis, clone HEMBA1002997, weakly similar to
CENTROMERIC PROTEIN E. ).
Length = 535
Score = 29.9 bits (64), Expect = 8.8
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Frame = +3
Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + +
Sbjct: 49 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 107
Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
II +R L V QK KL ++ +EN
Sbjct: 108 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 137
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 29.9 bits (64), Expect = 8.8
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Frame = +3
Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + +
Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759
Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
II +R L V QK KL ++ +EN
Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 29.9 bits (64), Expect = 8.8
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Frame = +3
Query: 324 LEKLLSSKSIKDARLLQQIILLMLEATICR-RTYDKTIEIAKNHGEPLKINNEVSELFER 500
L K ++ ++K+ L ++I + L+ + + + ++ TIE+ KNH PLK++ ++ + +
Sbjct: 701 LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEM-KNHYVPLKVSEDMKKSHDA 759
Query: 501 II---SRAQLLVGQKV---KLNLKPDSIEN 572
II +R L V QK KL ++ +EN
Sbjct: 760 IIDDLNRKLLDVTQKYTEKKLEMEKLLLEN 789
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,817,611
Number of Sequences: 237096
Number of extensions: 1793309
Number of successful extensions: 3253
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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