Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0991
         (398 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    26   0.44 
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    22   7.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   9.5  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    22   9.5  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   9.5  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 26.2 bits (55), Expect = 0.44
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
 Frame = +1

Query: 76  RTLDVRSGRMKL-SSYVRD----FRTPEASRFQSVNEGAL*AQMLGPERW*TM-PGQVEV 237
           RT  V +G  ++  SY +D    + T E    +SV  G     +LGP  W TM  G +++
Sbjct: 588 RTKRVPAGLQRIIHSYFQDRELVYETSEGPVVRSVTAGVPQGSILGPTLWNTMYDGVLDI 647

Query: 238 RGNPD 252
              PD
Sbjct: 648 ALPPD 652


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 170 KARSEHKCWDPKDGELCL 223
           +A S H+CW   + EL L
Sbjct: 122 RAYSHHRCWKETEPELRL 139


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 130 FRTPEASRFQSVNEGAL*AQMLGPERW*TM 219
           F T +    +S+  G     +LGP  W TM
Sbjct: 678 FETSDGPVTRSITAGVPQGSILGPTLWNTM 707


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 306 PYTQFRRSICTSE 268
           P+T F RSIC  E
Sbjct: 260 PFTDFLRSICLPE 272


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 113 DNFILPERTSSVRLHF 66
           D F+ PER S++ L F
Sbjct: 164 DTFVTPERKSAIDLTF 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,426
Number of Sequences: 2352
Number of extensions: 7341
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)