Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0990
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    29   0.092
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   1.5  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    24   3.5  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   4.6  
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           23   4.6  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   6.1  

>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 29.1 bits (62), Expect = 0.092
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -2

Query: 509 NSGASA*IAAVLSVGMGPRSSIGSPITLM 423
           ++GA    +A+L+ G+GPR+ IGS   LM
Sbjct: 455 SAGAPVDSSAMLAFGLGPRNCIGSRFALM 483


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 15  ISENVGGNKSSWKR 56
           I  N+GG KSSW+R
Sbjct: 739 IMPNIGGPKSSWRR 752


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
           protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 506 SGASA*IAAVLSVGMGPRSSIGSPITLMM 420
           SGAS      +  G+GPR  IG    LM+
Sbjct: 212 SGASKNRPPFMPFGLGPRHCIGDTFGLML 240


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 397  PGYELVSQSLVRVAHGLSLQYRPWQWSELCSHPNVGLPQVRGGEIDFAPQGHLESE 230
            P Y+L    +     G S   R +Q+    + P  G+P+   G IDF  Q H   E
Sbjct: 1099 PQYKLREFKVTDARDGSSRTVRQFQF---ITWPEQGVPKSGQGFIDFIGQVHKTKE 1151


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 342 FSTVHGNGPNCVLTQMLGYLKYEAGRSILHL 250
           +S   GN  NC+   ++G  + E     LHL
Sbjct: 70  YSKTTGNSGNCIACAIIGVAREEYFAERLHL 100


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 488 IAAVLSVGMGPRSSIGSPITLM 423
           + A L  G+GPR+ I S   LM
Sbjct: 462 LGAYLPFGIGPRNCIASRFALM 483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,880
Number of Sequences: 2352
Number of extensions: 11189
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)