Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0989
(462 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 268 1e-72
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 266 4e-72
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 266 4e-72
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 266 6e-72
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 266 6e-72
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 266 6e-72
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 265 1e-71
12_02_1282 + 27528159-27529148,27529549-27529614 264 2e-71
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 264 3e-71
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 263 6e-71
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 125 2e-29
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 102 1e-22
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 100 7e-22
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 79 1e-15
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 71 3e-13
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 69 1e-12
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 52 3e-07
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 43 1e-04
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 41 4e-04
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 40 0.001
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 29 1.8
10_08_0169 - 15385393-15385583,15388078-15388648 29 1.8
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 29 2.4
10_08_0029 + 14270945-14271364,14271449-14272486 28 3.2
03_06_0331 - 33181757-33181795,33182325-33182453,33182941-331829... 28 3.2
02_02_0572 + 11667455-11670783,11672026-11672419 28 3.2
08_01_1006 - 10191817-10191822,10192449-10192745,10192826-101929... 28 4.2
03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093 28 4.2
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 27 5.6
12_01_0843 + 7891622-7892524 27 5.6
02_05_0477 - 29339649-29340253,29340880-29341492 27 5.6
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 27 7.3
09_02_0082 - 4060018-4061604 27 9.7
07_03_0916 + 22565620-22566463,22566566-22566792,22566892-22567509 27 9.7
05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966... 27 9.7
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 268 bits (657), Expect = 1e-72
Identities = 121/131 (92%), Positives = 126/131 (96%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNTPAMY 460
MFETFNTPAMY
Sbjct: 125 MFETFNTPAMY 135
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 266 bits (653), Expect = 4e-72
Identities = 119/134 (88%), Positives = 126/134 (94%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
+KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE+HPVLLTEAPLNPKANREKM
Sbjct: 61 AKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKM 120
Query: 419 TQIMFETFNTPAMY 460
TQIMFETFN PAMY
Sbjct: 121 TQIMFETFNCPAMY 134
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 266 bits (653), Expect = 4e-72
Identities = 119/134 (88%), Positives = 126/134 (94%)
Frame = +2
Query: 59 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 238
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 239 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 418
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKM 120
Query: 419 TQIMFETFNTPAMY 460
TQIMFETFN PAMY
Sbjct: 121 TQIMFETFNCPAMY 134
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 266 bits (652), Expect = 6e-72
Identities = 120/131 (91%), Positives = 125/131 (95%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNTPAMY 460
MFETFN PAMY
Sbjct: 125 MFETFNVPAMY 135
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 266 bits (652), Expect = 6e-72
Identities = 120/131 (91%), Positives = 125/131 (95%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNTPAMY 460
MFETFN PAMY
Sbjct: 125 MFETFNVPAMY 135
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 266 bits (652), Expect = 6e-72
Identities = 120/131 (91%), Positives = 125/131 (95%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNTPAMY 460
MFETFN PAMY
Sbjct: 125 MFETFNVPAMY 135
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 265 bits (650), Expect = 1e-71
Identities = 119/131 (90%), Positives = 124/131 (94%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNTPAMY 460
MFETFN PAMY
Sbjct: 125 MFETFNAPAMY 135
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 264 bits (648), Expect = 2e-71
Identities = 119/131 (90%), Positives = 124/131 (94%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNTPAMY 460
MFETFN PAMY
Sbjct: 125 MFETFNAPAMY 135
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 264 bits (646), Expect = 3e-71
Identities = 118/131 (90%), Positives = 125/131 (95%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNTPAMY 460
MFETF+ PAMY
Sbjct: 125 MFETFSVPAMY 135
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 263 bits (644), Expect = 6e-71
Identities = 118/131 (90%), Positives = 124/131 (94%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 247
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 248 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANREKMTQI 124
Query: 428 MFETFNTPAMY 460
MFE+FN PAMY
Sbjct: 125 MFESFNVPAMY 135
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 125 bits (301), Expect = 2e-29
Identities = 59/128 (46%), Positives = 80/128 (62%), Gaps = 2/128 (1%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 256
+V DNG+G K GFAG++ P +VFP +VGRP R++ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 257 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 436
+ YP+ +GIV +WDDM IW H FY+EL+V P E +LLT+ PLNP NREKM + MFE
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFE 126
Query: 437 TFNTPAMY 460
+N ++
Sbjct: 127 KYNFAGVF 134
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 102 bits (245), Expect = 1e-22
Identities = 57/145 (39%), Positives = 78/145 (53%), Gaps = 18/145 (12%)
Frame = +2
Query: 80 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH---QGVMVG------------MGQKD 214
A+V+DNG+G K GF+G+ P P++V Q M M D
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLD 67
Query: 215 SYVGDEAQS---KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 385
++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PEEH LLT++
Sbjct: 68 FFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDS 127
Query: 386 PLNPKANREKMTQIMFETFNTPAMY 460
P++ +RE +IMFETFN P +Y
Sbjct: 128 PVSTPESRECAGEIMFETFNVPGLY 152
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 100 bits (239), Expect = 7e-22
Identities = 57/146 (39%), Positives = 80/146 (54%), Gaps = 19/146 (13%)
Frame = +2
Query: 80 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPRH---QGVMVG------MGQK 211
A+V+DNG+G K GFAG+ P + P++V G+ R +G + M
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
Query: 212 DSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 382
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LLTE
Sbjct: 68 DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTE 127
Query: 383 APLNPKANREKMTQIMFETFNTPAMY 460
+PL P RE +IMFETFN P +Y
Sbjct: 128 SPLTPPETREYTGEIMFETFNVPGLY 153
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 79.4 bits (187), Expect = 1e-15
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +2
Query: 218 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 397
YVG E + +R + + P++ G VT+WD ++ IW+H F L + PEEHP+L+ E N
Sbjct: 120 YVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNT 179
Query: 398 KANREKMTQIMFETFNTPAMY 460
REK ++MFE + PA++
Sbjct: 180 GQQREKAAELMFEKYKVPALF 200
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 163
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 71.3 bits (167), Expect = 3e-13
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE--AQSKRGIL 256
+V+DNG+ + G+AG+ PR F +IV RPRH+ G+ + VGD A K
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHRS----SGETVTVVGDTDPALMKYFDC 77
Query: 257 T---LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 427
T ++ P + +V ++ ME I F + HP+L+TE NP +R +M+++
Sbjct: 78 TRSAIRSPFDDDVVYQFEYMEYILDFGFDRLGATSEVGHPILMTECECNPSFSRARMSEL 137
Query: 428 MFETFNTPAM 457
+FET+ P++
Sbjct: 138 LFETYGVPSI 147
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 69.3 bits (162), Expect = 1e-12
Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +2
Query: 83 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI--- 253
+V+DNG G+ KAGF GD P AV P+ + +P G K V D+ Q++
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTG 59
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 433
+TL+ PI+ G + N + ++W N L+V P +LL E NP A + +++F
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVF 119
Query: 434 E 436
E
Sbjct: 120 E 120
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 51.6 bits (118), Expect = 3e-07
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 269 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 415
P++ G +WD ++ IW+H F L + PEEHP+L+ E N REK
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVEPSTNTGQQREK 140
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 239 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 415
++R + + P++ G +WD ++ IW+H F PEEHP+L+ E N REK
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYPEEHPMLIVEPSTNTGQQREK 217
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 41.1 bits (92), Expect = 4e-04
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +2
Query: 80 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 256
A+VVD GS + KAG A D +P V PS + + +D +GD A + +
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV- 51
Query: 257 TLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPK 400
P+ G V +WD ME + ++ Y+ + +E +L TE PK
Sbjct: 52 ---QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPK 97
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 239 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 415
++R + + P++ G +WD ++ IW+H F EEHP+L+ E N REK
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYAEEHPMLIVEPSTNTGQQREK 118
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 29.1 bits (62), Expect = 1.8
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Frame = +2
Query: 200 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 379
+ + DS + D Q K + +K+P G+V + W H Y V P+ V +T
Sbjct: 387 IARNDSIIVDICQRKGSVGQIKFPSLAGVVVALLFLLPKWTHGQYKSTLVCPDCRKVSVT 446
Query: 380 EAPLN------PKANREKMTQIMFETFNT 448
P P MT +F T T
Sbjct: 447 FDPFMYLSLPLPSTTMRTMTITVFNTDGT 475
>10_08_0169 - 15385393-15385583,15388078-15388648
Length = 253
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 370 DGVFLGGDTQLIVEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFALCLIS 224
DG LG D + M +LHV+P D + V D + A CL++
Sbjct: 95 DGFPLGFDRSRNHDQYMEGVLHVLPAHVDELLRRVVGDGDAAAATCLVA 143
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 180 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 61
WR P + + ARG S P + AL +P++ +++ H
Sbjct: 251 WRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEH 290
>10_08_0029 + 14270945-14271364,14271449-14272486
Length = 485
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 233 PHLLHKSPSVPY---RPSRPDGGAFPRSRETLREEHHL 129
PHL P P+ +PSR GG PRS + R H+
Sbjct: 380 PHLPQPPPPPPHFERQPSRRRGGGVPRSVKMQRSSSHV 417
>03_06_0331 -
33181757-33181795,33182325-33182453,33182941-33182967,
33183459-33183545,33183827-33183975,33185467-33185521,
33185596-33187584,33188705-33188782
Length = 850
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 388 PQPQGQQREDDPDHVRNIQH 447
P Q+ DDPDHV+N+ H
Sbjct: 393 PHETNQEDLDDPDHVKNLLH 412
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 352 PRGTPRPAY*GSPQPQGQQREDDPDHVRNIQ 444
P +PA GS P G R DDPD RN++
Sbjct: 95 PSSASQPAAGGSKFP-GLSRPDDPDRARNLR 124
>08_01_1006 -
10191817-10191822,10192449-10192745,10192826-10192975,
10194558-10195370
Length = 421
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 207 CPIPTITP*WRGLPTIEGNTARGASSPAK 121
C +P P +RG P++ T RG + PA+
Sbjct: 142 CDMPLAPPGFRGFPSLVSLTLRGVTLPAE 170
>03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093
Length = 435
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 218 KSPSVPYRPSRPDGGAFPR 162
+ P+V +RP+ PDGGA P+
Sbjct: 207 RCPTVQHRPTPPDGGAPPK 225
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 215 SPSVPYRPSRPDGGAFP 165
+P PYRP P GG FP
Sbjct: 294 APGGPYRPLGPPGGGFP 310
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAV 151
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 68 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 166
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 89 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 220
++N S K GF + V +++G P H G + G+ K S+
Sbjct: 322 IENLSSSQKKGFFKPKREKDVLSTVLGTPEHGGRVRGVSSKMSW 365
>09_02_0082 - 4060018-4061604
Length = 528
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 150 TARGASSPAKPALHIPEPLSTTNAATSSSH 61
TA G S+P +P +P PL T + T++ +
Sbjct: 105 TAAGHSTPPEPVPSVPVPLGLTMSPTTAHY 134
>07_03_0916 + 22565620-22566463,22566566-22566792,22566892-22567509
Length = 562
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 365 GVPRGRHAAHCRRYDAKSSPCHP 297
G+ GRH HC D P +P
Sbjct: 203 GIDTGRHEVHCTAADGDGLPANP 225
>05_06_0166 + 26093618-26095381,26095820-26096039,26096345-26096674,
26097481-26098029,26098366-26098426,26099737-26099824,
26100240-26100299
Length = 1023
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 239 SVPHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSH 96
S PH+L + + PS+ D + P + +R+E+ +L+ R H
Sbjct: 880 SDPHILTEGEIIEVGPSQVDWHSEPNNSAGVRKENIVLQGREVVNNEH 927
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,981,088
Number of Sequences: 37544
Number of extensions: 367704
Number of successful extensions: 1165
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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