BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0988 (428 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 30 2.9 BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 30 2.9 AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 30 2.9 AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 30 2.9 AY028897-1|AAK30022.1| 1642|Homo sapiens ATP-binding cassette A5... 30 3.8 AK056533-1|BAB71208.1| 865|Homo sapiens protein ( Homo sapiens ... 30 3.8 AJ275973-1|CAB93535.3| 1642|Homo sapiens ATP-binding cassette pr... 30 3.8 AB067475-1|BAB67781.1| 737|Homo sapiens KIAA1888 protein protein. 30 3.8 >U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. Length = 884 Score = 30.3 bits (65), Expect = 2.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 168 PPCRASKCPPQSNNEDHSMFPGVEYHELP 254 PP + PP N++D S+ P V Y +LP Sbjct: 591 PPHMRRQGPPHINHDDPSLVPNVPYFDLP 619 >BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis endoplasmic reticulum protein protein. Length = 884 Score = 30.3 bits (65), Expect = 2.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 168 PPCRASKCPPQSNNEDHSMFPGVEYHELP 254 PP + PP N++D S+ P V Y +LP Sbjct: 591 PPHMRRQGPPHINHDDPSLVPNVPYFDLP 619 >AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated factor 6 protein. Length = 916 Score = 30.3 bits (65), Expect = 2.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 168 PPCRASKCPPQSNNEDHSMFPGVEYHELP 254 PP + PP N++D S+ P V Y +LP Sbjct: 623 PPHMRRQGPPHINHDDPSLVPNVPYFDLP 651 >AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis endoplasmic reticulum protein variant protein. Length = 399 Score = 30.3 bits (65), Expect = 2.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 168 PPCRASKCPPQSNNEDHSMFPGVEYHELP 254 PP + PP N++D S+ P V Y +LP Sbjct: 106 PPHMRRQGPPHINHDDPSLVPNVPYFDLP 134 >AY028897-1|AAK30022.1| 1642|Homo sapiens ATP-binding cassette A5 protein. Length = 1642 Score = 29.9 bits (64), Expect = 3.8 Identities = 10/33 (30%), Positives = 23/33 (69%) Frame = -3 Query: 285 IINLISSYHVWAVHGTQLLETWSGPRCSIVEDI 187 ++N+IS+Y+++ ++ T+ ++ WS P + DI Sbjct: 983 LVNIISNYYLYHLNVTETIQIWSTPFFQEITDI 1015 >AK056533-1|BAB71208.1| 865|Homo sapiens protein ( Homo sapiens cDNA FLJ31971 fis, clone NT2RP7008137, weakly similar to ATP-BINDING CASSETTE, SUB-FAMILY A, MEMBER 1. ). Length = 865 Score = 29.9 bits (64), Expect = 3.8 Identities = 10/33 (30%), Positives = 23/33 (69%) Frame = -3 Query: 285 IINLISSYHVWAVHGTQLLETWSGPRCSIVEDI 187 ++N+IS+Y+++ ++ T+ ++ WS P + DI Sbjct: 206 LVNIISNYYLYHLNVTETIQIWSTPFFQEITDI 238 >AJ275973-1|CAB93535.3| 1642|Homo sapiens ATP-binding cassette protein protein. Length = 1642 Score = 29.9 bits (64), Expect = 3.8 Identities = 10/33 (30%), Positives = 23/33 (69%) Frame = -3 Query: 285 IINLISSYHVWAVHGTQLLETWSGPRCSIVEDI 187 ++N+IS+Y+++ ++ T+ ++ WS P + DI Sbjct: 983 LVNIISNYYLYHLNVTETIQIWSTPFFQEITDI 1015 >AB067475-1|BAB67781.1| 737|Homo sapiens KIAA1888 protein protein. Length = 737 Score = 29.9 bits (64), Expect = 3.8 Identities = 10/33 (30%), Positives = 23/33 (69%) Frame = -3 Query: 285 IINLISSYHVWAVHGTQLLETWSGPRCSIVEDI 187 ++N+IS+Y+++ ++ T+ ++ WS P + DI Sbjct: 78 LVNIISNYYLYHLNVTETIQIWSTPFFQEITDI 110 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 66,642,215 Number of Sequences: 237096 Number of extensions: 1464303 Number of successful extensions: 2851 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2736 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2850 length of database: 76,859,062 effective HSP length: 83 effective length of database: 57,180,094 effective search space used: 3373625546 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -