Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0988
(428 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A pro... 29 2.0
AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati... 29 2.0
AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,... 29 2.0
AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,... 29 2.0
AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,... 29 2.0
BT022701-1|AAY55117.1| 157|Drosophila melanogaster IP07196p pro... 28 4.6
AE014297-1019|AAN13441.1| 157|Drosophila melanogaster CG31415-P... 28 4.6
BT003470-1|AAO39473.1| 506|Drosophila melanogaster RE70685p pro... 28 6.1
AE014134-789|AAF50967.3| 790|Drosophila melanogaster CG31660-PB... 28 6.1
AE014134-788|AAX52647.1| 944|Drosophila melanogaster CG31660-PC... 28 6.1
AY129451-1|AAM76193.1| 787|Drosophila melanogaster RE01517p pro... 27 8.1
AE014298-1891|AAF48260.1| 787|Drosophila melanogaster CG10617-P... 27 8.1
>DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A protein.
Length = 3790
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 159 WQHWLRMLAMEEVACAIWNLV 97
WQ++L L+ E+V C +W+L+
Sbjct: 1604 WQNYLSTLSSEDVLCDLWHLI 1624
>AY142217-1|AAN52145.1| 3803|Drosophila melanogaster
transformation/transcription domain-associated protein
protein.
Length = 3803
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 159 WQHWLRMLAMEEVACAIWNLV 97
WQ++L L+ E+V C +W+L+
Sbjct: 1666 WQNYLSTLSSEDVLCDLWHLI 1686
>AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,
isoform A protein.
Length = 3805
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 159 WQHWLRMLAMEEVACAIWNLV 97
WQ++L L+ E+V C +W+L+
Sbjct: 1668 WQNYLSTLSSEDVLCDLWHLI 1688
>AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,
isoform C protein.
Length = 3628
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 159 WQHWLRMLAMEEVACAIWNLV 97
WQ++L L+ E+V C +W+L+
Sbjct: 1512 WQNYLSTLSSEDVLCDLWHLI 1532
>AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,
isoform B protein.
Length = 3400
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 159 WQHWLRMLAMEEVACAIWNLV 97
WQ++L L+ E+V C +W+L+
Sbjct: 1342 WQNYLSTLSSEDVLCDLWHLI 1362
>BT022701-1|AAY55117.1| 157|Drosophila melanogaster IP07196p
protein.
Length = 157
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 171 PCRASKCPPQSNNEDHSMFPG 233
PC PPQSNN D PG
Sbjct: 5 PCSGRSLPPQSNNPDSCPAPG 25
>AE014297-1019|AAN13441.1| 157|Drosophila melanogaster CG31415-PA
protein.
Length = 157
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 171 PCRASKCPPQSNNEDHSMFPG 233
PC PPQSNN D PG
Sbjct: 5 PCSGRSLPPQSNNPDSCPAPG 25
>BT003470-1|AAO39473.1| 506|Drosophila melanogaster RE70685p
protein.
Length = 506
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -2
Query: 256 LGSSWYSTPGNMEWSSLF-DC 197
LG++W ST G EW + F DC
Sbjct: 375 LGAAWNSTDGTQEWGAPFRDC 395
>AE014134-789|AAF50967.3| 790|Drosophila melanogaster CG31660-PB,
isoform B protein.
Length = 790
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -2
Query: 256 LGSSWYSTPGNMEWSSLF-DC 197
LG++W ST G EW + F DC
Sbjct: 375 LGAAWNSTDGTQEWGAPFRDC 395
>AE014134-788|AAX52647.1| 944|Drosophila melanogaster CG31660-PC,
isoform C protein.
Length = 944
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -2
Query: 256 LGSSWYSTPGNMEWSSLF-DC 197
LG++W ST G EW + F DC
Sbjct: 375 LGAAWNSTDGTQEWGAPFRDC 395
>AY129451-1|AAM76193.1| 787|Drosophila melanogaster RE01517p
protein.
Length = 787
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 177 CTVG*GWQHWLRMLAMEEVACAIWNLV 97
C VG G +HW +ML+ A+W+++
Sbjct: 726 CAVGKGLRHWHQMLSSLRKPVAMWHVL 752
>AE014298-1891|AAF48260.1| 787|Drosophila melanogaster CG10617-PA
protein.
Length = 787
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 177 CTVG*GWQHWLRMLAMEEVACAIWNLV 97
C VG G +HW +ML+ A+W+++
Sbjct: 726 CAVGKGLRHWHQMLSSLRKPVAMWHVL 752
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,828,526
Number of Sequences: 53049
Number of extensions: 405982
Number of successful extensions: 1125
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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