BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0988 (428 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A pro... 29 2.0 AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati... 29 2.0 AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,... 29 2.0 AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,... 29 2.0 AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,... 29 2.0 BT022701-1|AAY55117.1| 157|Drosophila melanogaster IP07196p pro... 28 4.6 AE014297-1019|AAN13441.1| 157|Drosophila melanogaster CG31415-P... 28 4.6 BT003470-1|AAO39473.1| 506|Drosophila melanogaster RE70685p pro... 28 6.1 AE014134-789|AAF50967.3| 790|Drosophila melanogaster CG31660-PB... 28 6.1 AE014134-788|AAX52647.1| 944|Drosophila melanogaster CG31660-PC... 28 6.1 AY129451-1|AAM76193.1| 787|Drosophila melanogaster RE01517p pro... 27 8.1 AE014298-1891|AAF48260.1| 787|Drosophila melanogaster CG10617-P... 27 8.1 >DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A protein. Length = 3790 Score = 29.5 bits (63), Expect = 2.0 Identities = 9/21 (42%), Positives = 16/21 (76%) Frame = -3 Query: 159 WQHWLRMLAMEEVACAIWNLV 97 WQ++L L+ E+V C +W+L+ Sbjct: 1604 WQNYLSTLSSEDVLCDLWHLI 1624 >AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformation/transcription domain-associated protein protein. Length = 3803 Score = 29.5 bits (63), Expect = 2.0 Identities = 9/21 (42%), Positives = 16/21 (76%) Frame = -3 Query: 159 WQHWLRMLAMEEVACAIWNLV 97 WQ++L L+ E+V C +W+L+ Sbjct: 1666 WQNYLSTLSSEDVLCDLWHLI 1686 >AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA, isoform A protein. Length = 3805 Score = 29.5 bits (63), Expect = 2.0 Identities = 9/21 (42%), Positives = 16/21 (76%) Frame = -3 Query: 159 WQHWLRMLAMEEVACAIWNLV 97 WQ++L L+ E+V C +W+L+ Sbjct: 1668 WQNYLSTLSSEDVLCDLWHLI 1688 >AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC, isoform C protein. Length = 3628 Score = 29.5 bits (63), Expect = 2.0 Identities = 9/21 (42%), Positives = 16/21 (76%) Frame = -3 Query: 159 WQHWLRMLAMEEVACAIWNLV 97 WQ++L L+ E+V C +W+L+ Sbjct: 1512 WQNYLSTLSSEDVLCDLWHLI 1532 >AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB, isoform B protein. Length = 3400 Score = 29.5 bits (63), Expect = 2.0 Identities = 9/21 (42%), Positives = 16/21 (76%) Frame = -3 Query: 159 WQHWLRMLAMEEVACAIWNLV 97 WQ++L L+ E+V C +W+L+ Sbjct: 1342 WQNYLSTLSSEDVLCDLWHLI 1362 >BT022701-1|AAY55117.1| 157|Drosophila melanogaster IP07196p protein. Length = 157 Score = 28.3 bits (60), Expect = 4.6 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 171 PCRASKCPPQSNNEDHSMFPG 233 PC PPQSNN D PG Sbjct: 5 PCSGRSLPPQSNNPDSCPAPG 25 >AE014297-1019|AAN13441.1| 157|Drosophila melanogaster CG31415-PA protein. Length = 157 Score = 28.3 bits (60), Expect = 4.6 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 171 PCRASKCPPQSNNEDHSMFPG 233 PC PPQSNN D PG Sbjct: 5 PCSGRSLPPQSNNPDSCPAPG 25 >BT003470-1|AAO39473.1| 506|Drosophila melanogaster RE70685p protein. Length = 506 Score = 27.9 bits (59), Expect = 6.1 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%) Frame = -2 Query: 256 LGSSWYSTPGNMEWSSLF-DC 197 LG++W ST G EW + F DC Sbjct: 375 LGAAWNSTDGTQEWGAPFRDC 395 >AE014134-789|AAF50967.3| 790|Drosophila melanogaster CG31660-PB, isoform B protein. Length = 790 Score = 27.9 bits (59), Expect = 6.1 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%) Frame = -2 Query: 256 LGSSWYSTPGNMEWSSLF-DC 197 LG++W ST G EW + F DC Sbjct: 375 LGAAWNSTDGTQEWGAPFRDC 395 >AE014134-788|AAX52647.1| 944|Drosophila melanogaster CG31660-PC, isoform C protein. Length = 944 Score = 27.9 bits (59), Expect = 6.1 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 1/21 (4%) Frame = -2 Query: 256 LGSSWYSTPGNMEWSSLF-DC 197 LG++W ST G EW + F DC Sbjct: 375 LGAAWNSTDGTQEWGAPFRDC 395 >AY129451-1|AAM76193.1| 787|Drosophila melanogaster RE01517p protein. Length = 787 Score = 27.5 bits (58), Expect = 8.1 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3 Query: 177 CTVG*GWQHWLRMLAMEEVACAIWNLV 97 C VG G +HW +ML+ A+W+++ Sbjct: 726 CAVGKGLRHWHQMLSSLRKPVAMWHVL 752 >AE014298-1891|AAF48260.1| 787|Drosophila melanogaster CG10617-PA protein. Length = 787 Score = 27.5 bits (58), Expect = 8.1 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3 Query: 177 CTVG*GWQHWLRMLAMEEVACAIWNLV 97 C VG G +HW +ML+ A+W+++ Sbjct: 726 CAVGKGLRHWHQMLSSLRKPVAMWHVL 752 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,828,526 Number of Sequences: 53049 Number of extensions: 405982 Number of successful extensions: 1125 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1094 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1125 length of database: 24,988,368 effective HSP length: 78 effective length of database: 20,850,546 effective search space used: 1334434944 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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