BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0984 (433 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 1.9 DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 23 1.9 AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 23 1.9 AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 22 2.6 AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 22 2.6 EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 5.9 EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 5.9 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.8 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.8 >DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel protein. Length = 463 Score = 22.6 bits (46), Expect = 1.9 Identities = 10/31 (32%), Positives = 16/31 (51%) Frame = +2 Query: 272 DEKLVDAGDIKEEEYTQNKPLPGKKLTTRQY 364 DE+ D +K+E TQ+ L TR++ Sbjct: 322 DEEEADTRPLKKEPITQSNKRTAGNLATREH 352 >DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid phosphatase protein. Length = 373 Score = 22.6 bits (46), Expect = 1.9 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -3 Query: 239 YQDHLNTPIDCVLFGI 192 Y+D++ P DC+LF I Sbjct: 120 YEDNIFLPEDCLLFTI 135 >AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase precursor protein. Length = 388 Score = 22.6 bits (46), Expect = 1.9 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -3 Query: 239 YQDHLNTPIDCVLFGI 192 Y+D++ P DC+LF I Sbjct: 135 YEDNIFLPEDCLLFTI 150 >AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein ASP1 protein. Length = 144 Score = 22.2 bits (45), Expect = 2.6 Identities = 8/17 (47%), Positives = 14/17 (82%) Frame = -2 Query: 402 NLLCFMYCLIKSAYCLV 352 ++ C+MYCL++ A+ LV Sbjct: 69 SITCYMYCLLE-AFSLV 84 >AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding protein ASP1 protein. Length = 144 Score = 22.2 bits (45), Expect = 2.6 Identities = 8/17 (47%), Positives = 14/17 (82%) Frame = -2 Query: 402 NLLCFMYCLIKSAYCLV 352 ++ C+MYCL++ A+ LV Sbjct: 69 SITCYMYCLLE-AFSLV 84 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 21.0 bits (42), Expect = 5.9 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +3 Query: 138 FSQLPLYKIINLNIPN 185 FS LP YK LN+ N Sbjct: 315 FSSLPYYKYKYLNVIN 330 >EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. Length = 686 Score = 21.0 bits (42), Expect = 5.9 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +3 Query: 138 FSQLPLYKIINLNIPN 185 FS LP YK LN+ N Sbjct: 315 FSSLPYYKYKYLNVIN 330 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 20.6 bits (41), Expect = 7.8 Identities = 6/9 (66%), Positives = 9/9 (100%) Frame = -3 Query: 209 CVLFGILYV 183 CV+FG+L+V Sbjct: 16 CVIFGVLFV 24 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 20.6 bits (41), Expect = 7.8 Identities = 6/9 (66%), Positives = 9/9 (100%) Frame = -3 Query: 209 CVLFGILYV 183 CV+FG+L+V Sbjct: 16 CVIFGVLFV 24 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 112,316 Number of Sequences: 438 Number of extensions: 2308 Number of successful extensions: 9 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 11244597 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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