Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0983
(600 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061318-1|AAL28866.1| 331|Drosophila melanogaster LD23604p pro... 62 6e-10
AE014298-2747|AAF48866.1| 331|Drosophila melanogaster CG6540-PA... 62 6e-10
BT024354-1|ABC86416.1| 885|Drosophila melanogaster IP09037p pro... 32 0.69
BT022132-1|AAY51527.1| 885|Drosophila melanogaster IP08837p pro... 32 0.69
AY484701-1|AAR85347.1| 881|Drosophila melanogaster dysfusion pr... 32 0.69
AE014297-3920|AAF56569.3| 881|Drosophila melanogaster CG32474-P... 32 0.69
AB095028-1|BAE53416.1| 918|Drosophila melanogaster bHLH-PAS pro... 32 0.69
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 30 2.8
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 30 2.8
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 30 2.8
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 30 2.8
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 30 2.8
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 30 2.8
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 30 2.8
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 24 3.1
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 24 3.1
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 24 3.1
AY147847-1|AAN64333.1| 1282|Drosophila melanogaster cytokine rec... 29 3.7
AY075427-1|AAL68243.1| 1282|Drosophila melanogaster LD46805p pro... 29 3.7
AJ420377-1|CAD12503.1| 1282|Drosophila melanogaster interleukine... 29 3.7
AE014298-2912|AAF49002.1| 1282|Drosophila melanogaster CG14226-P... 29 3.7
L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprot... 28 8.4
AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG... 28 8.4
AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC... 28 8.4
AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA... 28 8.4
>AY061318-1|AAL28866.1| 331|Drosophila melanogaster LD23604p
protein.
Length = 331
Score = 62.1 bits (144), Expect = 6e-10
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +2
Query: 152 MEPMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKGR-NLAFGXXXXXXX 328
MEPM LGSP +SP GS YLPPFLLG+ TP N+LSP GR N++F
Sbjct: 1 MEPMNLGSPVNSP-GSNQTQYLPPFLLGD-PQGITPHKNTLSPKTGRSNISFATSPGGSS 58
Query: 329 XXXXDQKIYRQNISMHQQALYNQQSTYTNIPTSPNISYSTKPNGPPIEDLFDTIKSNEPS 508
++ Q + + T+ ++S GPP + LFD+++ +
Sbjct: 59 PHELNRSALSTRTLFAAQGGAHTAVGANSSTTAHGQTHSHHQTGPPTQGLFDSLREQSVT 118
Query: 509 VNK 517
K
Sbjct: 119 PKK 121
>AE014298-2747|AAF48866.1| 331|Drosophila melanogaster CG6540-PA
protein.
Length = 331
Score = 62.1 bits (144), Expect = 6e-10
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = +2
Query: 152 MEPMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKGR-NLAFGXXXXXXX 328
MEPM LGSP +SP GS YLPPFLLG+ TP N+LSP GR N++F
Sbjct: 1 MEPMNLGSPVNSP-GSNQTQYLPPFLLGD-PQGITPHKNTLSPKTGRSNISFATSPGGSS 58
Query: 329 XXXXDQKIYRQNISMHQQALYNQQSTYTNIPTSPNISYSTKPNGPPIEDLFDTIKSNEPS 508
++ Q + + T+ ++S GPP + LFD+++ +
Sbjct: 59 PHELNRSALSTRTLFAAQGGAHTAVGANSSTTAHGQTHSHHQTGPPTQGLFDSLREQSVT 118
Query: 509 VNK 517
K
Sbjct: 119 PKK 121
>BT024354-1|ABC86416.1| 885|Drosophila melanogaster IP09037p
protein.
Length = 885
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 89 LKEIKRANLVAKSYTYKRFTKMEPMTLGSPTHS----PSGSPNVGYLPPFLLGEINPPTT 256
L + + + ++A S+ Y +T + G P S P G+P+ GY P +PP T
Sbjct: 476 LNDREASIMLANSWLYHYYTVQSKIQFGMPLDSGIRVPPGTPSSGYYSPH---SSHPPAT 532
Query: 257 PRTNSLSPTKGRNLAFG 307
P +P G +FG
Sbjct: 533 P--GGATPNLGIASSFG 547
>BT022132-1|AAY51527.1| 885|Drosophila melanogaster IP08837p
protein.
Length = 885
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 89 LKEIKRANLVAKSYTYKRFTKMEPMTLGSPTHS----PSGSPNVGYLPPFLLGEINPPTT 256
L + + + ++A S+ Y +T + G P S P G+P+ GY P +PP T
Sbjct: 476 LNDREASIMLANSWLYHYYTVQSKIQFGMPLDSGIRVPPGTPSSGYYSPH---SSHPPAT 532
Query: 257 PRTNSLSPTKGRNLAFG 307
P +P G +FG
Sbjct: 533 P--GGATPNLGIASSFG 547
>AY484701-1|AAR85347.1| 881|Drosophila melanogaster dysfusion
protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 89 LKEIKRANLVAKSYTYKRFTKMEPMTLGSPTHS----PSGSPNVGYLPPFLLGEINPPTT 256
L + + + ++A S+ Y +T + G P S P G+P+ GY P +PP T
Sbjct: 476 LNDREASIMLANSWLYHYYTVQSKIQFGMPLDSGIRVPPGTPSSGYYSPH---SSHPPAT 532
Query: 257 PRTNSLSPTKGRNLAFG 307
P +P G +FG
Sbjct: 533 P--GGATPNLGIASSFG 547
>AE014297-3920|AAF56569.3| 881|Drosophila melanogaster CG32474-PA
protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 89 LKEIKRANLVAKSYTYKRFTKMEPMTLGSPTHS----PSGSPNVGYLPPFLLGEINPPTT 256
L + + + ++A S+ Y +T + G P S P G+P+ GY P +PP T
Sbjct: 476 LNDREASIMLANSWLYHYYTVQSKIQFGMPLDSGIRVPPGTPSSGYYSPH---SSHPPAT 532
Query: 257 PRTNSLSPTKGRNLAFG 307
P +P G +FG
Sbjct: 533 P--GGATPNLGIASSFG 547
>AB095028-1|BAE53416.1| 918|Drosophila melanogaster bHLH-PAS
protein similar to humanNXF protein.
Length = 918
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +2
Query: 89 LKEIKRANLVAKSYTYKRFTKMEPMTLGSPTHS----PSGSPNVGYLPPFLLGEINPPTT 256
L + + + ++A S+ Y +T + G P S P G+P+ GY P +PP T
Sbjct: 512 LNDREASIMLANSWLYHYYTVQSKIQFGMPLDSGIRVPPGTPSSGYYSPH---SSHPPAT 568
Query: 257 PRTNSLSPTKGRNLAFG 307
P +P G +FG
Sbjct: 569 P--GGATPNLGIASSFG 583
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p protein.
Length = 1521
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKG 289
P SP +SPS SP+VG + LG++ P P T S + G
Sbjct: 1162 PQASMSPYNSPSPSPSVGGVTA-CLGQLTKPAAPGTASAGLSGG 1204
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKG 289
P SP +SPS SP+VG + LG++ P P T S + G
Sbjct: 1640 PQASMSPYNSPSPSPSVGGVTA-CLGQLTKPAAPGTASAGLSGG 1682
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKG 289
P SP +SPS SP+VG + LG++ P P T S + G
Sbjct: 1646 PQASMSPYNSPSPSPSVGGVTA-CLGQLTKPAAPGTASAGLSGG 1688
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKG 289
P SP +SPS SP+VG + LG++ P P T S + G
Sbjct: 1589 PQASMSPYNSPSPSPSVGGVTA-CLGQLTKPAAPGTASAGLSGG 1631
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKG 289
P SP +SPS SP+VG + LG++ P P T S + G
Sbjct: 1589 PQASMSPYNSPSPSPSVGGVTA-CLGQLTKPAAPGTASAGLSGG 1631
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKG 289
P SP +SPS SP+VG + LG++ P P T S + G
Sbjct: 1646 PQASMSPYNSPSPSPSVGGVTA-CLGQLTKPAAPGTASAGLSGG 1688
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPTKG 289
P SP +SPS SP+VG + LG++ P P T S + G
Sbjct: 1646 PQASMSPYNSPSPSPSVGGVTA-CLGQLTKPAAPGTASAGLSGG 1688
>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
protein.
Length = 2176
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPT 283
P T P PS + LPP L PP T ++ PT
Sbjct: 912 PATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPT 953
Score = 23.8 bits (49), Expect(2) = 3.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 398 QSTYTNIPTSPNISYSTKPNGPPIEDLFDTIKSNEPSVNKS 520
QS T P + I+ T P+GPP T +PSV +S
Sbjct: 958 QSAQTLPPPTSAINVYTTPDGPP------TASQTKPSVTES 992
>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
protein.
Length = 2165
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPT 283
P T P PS + LPP L PP T ++ PT
Sbjct: 901 PATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPT 942
Score = 23.8 bits (49), Expect(2) = 3.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 398 QSTYTNIPTSPNISYSTKPNGPPIEDLFDTIKSNEPSVNKS 520
QS T P + I+ T P+GPP T +PSV +S
Sbjct: 947 QSAQTLPPPTSAINVYTTPDGPP------TASQTKPSVTES 981
>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
protein.
Length = 1984
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +2
Query: 158 PMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLSPT 283
P T P PS + LPP L PP T ++ PT
Sbjct: 705 PATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPT 746
Score = 23.8 bits (49), Expect(2) = 3.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 398 QSTYTNIPTSPNISYSTKPNGPPIEDLFDTIKSNEPSVNKS 520
QS T P + I+ T P+GPP T +PSV +S
Sbjct: 751 QSAQTLPPPTSAINVYTTPDGPP------TASQTKPSVTES 785
>AY147847-1|AAN64333.1| 1282|Drosophila melanogaster cytokine receptor
domeless protein.
Length = 1282
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 164 TLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPR 262
T+GSPTH+ G+P G L +IN TP+
Sbjct: 1238 TVGSPTHAAGGAPGGGNQHSRLQPQINGYVTPQ 1270
>AY075427-1|AAL68243.1| 1282|Drosophila melanogaster LD46805p protein.
Length = 1282
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 164 TLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPR 262
T+GSPTH+ G+P G L +IN TP+
Sbjct: 1238 TVGSPTHAAGGAPGGGNQHSRLQPQINGYVTPQ 1270
>AJ420377-1|CAD12503.1| 1282|Drosophila melanogaster interleukine
JAK/STAT receptor protein.
Length = 1282
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 164 TLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPR 262
T+GSPTH+ G+P G L +IN TP+
Sbjct: 1238 TVGSPTHAAGGAPGGGNQHSRLQPQINGYVTPQ 1270
>AE014298-2912|AAF49002.1| 1282|Drosophila melanogaster CG14226-PA
protein.
Length = 1282
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 164 TLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPR 262
T+GSPTH+ G+P G L +IN TP+
Sbjct: 1238 TVGSPTHAAGGAPGGGNQHSRLQPQINGYVTPQ 1270
>L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprotein
protein.
Length = 465
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 149 KMEPMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLS 277
+M P + G P P N G LPP G + PPT + +S
Sbjct: 409 RMNPYSAGPPNSYPYTGYNAGPLPP--NGSVPPPTGAKAVGVS 449
>AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG,
isoform G protein.
Length = 465
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 149 KMEPMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLS 277
+M P + G P P N G LPP G + PPT + +S
Sbjct: 409 RMNPYSAGPPNSYPYTGYNAGPLPP--NGSVPPPTGAKAVGVS 449
>AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC,
isoform C protein.
Length = 465
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 149 KMEPMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLS 277
+M P + G P P N G LPP G + PPT + +S
Sbjct: 409 RMNPYSAGPPNSYPYTGYNAGPLPP--NGSVPPPTGAKAVGVS 449
>AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA,
isoform A protein.
Length = 465
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 149 KMEPMTLGSPTHSPSGSPNVGYLPPFLLGEINPPTTPRTNSLS 277
+M P + G P P N G LPP G + PPT + +S
Sbjct: 409 RMNPYSAGPPNSYPYTGYNAGPLPP--NGSVPPPTGAKAVGVS 449
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,482,125
Number of Sequences: 53049
Number of extensions: 553108
Number of successful extensions: 1895
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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