Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0982
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   0.73 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.9  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 52  RGRSESDGTGGPCH 93
           RG + +DG GGP H
Sbjct: 291 RGAARADGAGGPLH 304


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -3

Query: 334 KCFVQRDSGSDQQHSV--LCGLTEYFGLSNLEY 242
           K +V +    + +HSV  +  L+E FGL NL+Y
Sbjct: 361 KQYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKY 393


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 247  QGWTGQSTPSVRKGP 291
            QGWT    P+ R GP
Sbjct: 1689 QGWTVVQDPNRRMGP 1703


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 122 FYPSDAVSTERAVELAANTRG 184
           FYP +A   +  +  A+ +RG
Sbjct: 252 FYPEEAPQRKELLRFASESRG 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,299
Number of Sequences: 336
Number of extensions: 2298
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)