BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0982 (531 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751,485... 58 4e-09 05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 50 2e-06 06_01_0237 - 1808203-1809159,1809246-1809399,1809488-1809636,180... 40 0.001 04_03_0092 + 11079185-11079589,11081319-11081409,11081507-110816... 38 0.005 06_01_0313 - 2250312-2250516,2250585-2250610,2250792-2251076,225... 36 0.020 12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812 33 0.14 09_04_0141 + 15036249-15036339,15036834-15037768,15037968-15038081 33 0.14 03_05_0477 + 24707460-24707553,24707644-24707711,24707857-247079... 33 0.14 06_03_0570 - 22363197-22363588,22363755-22366782 30 1.3 01_06_1097 + 34507376-34507395,34509380-34511214,34511263-345115... 29 2.3 12_02_1116 + 26189651-26190544 29 3.1 03_01_0351 - 2758646-2759518 29 3.1 11_06_0754 - 26935647-26937780,26940890-26941827 28 4.1 02_04_0138 - 20144653-20144685,20144992-20145081,20145405-201454... 28 4.1 06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053 28 5.4 03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602... 28 5.4 12_02_0347 + 17808819-17809386,17809920-17810005,17810596-17810628 27 7.1 01_06_0141 - 26905855-26906928 27 7.1 08_02_1125 + 24488073-24488244,24488358-24488398,24488621-244888... 27 9.4 02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166... 27 9.4 02_02_0235 + 8114606-8114806,8116530-8116692,8116785-8116887,811... 27 9.4 >07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751, 4856131-4856277 Length = 711 Score = 58.0 bits (134), Expect = 4e-09 Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 6/164 (3%) Frame = +2 Query: 47 IGEDGPSQMGLEDLAMFRTVPTATVFYPSDAVSTERAVELAA--NTRGICYIRTSRPN-- 214 +G DGP+ G D+A +P V P+D V AA + R C+ R R N Sbjct: 496 VGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAAAIDDRPSCF-RFPRGNGI 554 Query: 215 TAILYPNDE--VFKVGQAKVLRQSAKDRVLLIGAGITLHXXXXXXXXXXXXGVEARVLDP 388 A+L PN + +VG+ +VL +RV L+G G + G+ V D Sbjct: 555 GAVLPPNHKGTPLEVGKGRVL--VGGNRVALLGYGTMVQACMKAAEALKEHGIYVTVADA 612 Query: 389 FTIKPLDEAAVLENARAAEGRILVVEDHYQAGGVGEAVLSAVSL 520 KPLD + E AAE +LV + GG G V +SL Sbjct: 613 RFCKPLDTGLIRE--LAAEHEVLVTVEEGSIGGFGSHVAHYLSL 654 >05_04_0284 - 19813179-19813340,19813464-19813748,19813850-19814131, 19814224-19814531,19814654-19814927,19815807-19816175, 19816372-19816434,19817495-19817789,19817818-19818008, 19818123-19818428,19818516-19818638 Length = 885 Score = 49.6 bits (113), Expect = 2e-06 Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 6/164 (3%) Frame = +2 Query: 47 IGEDGPSQMGLEDLAMFRTVPTATVFYPSDAVSTERAVELAA--NTRGICYIRTSRPN-- 214 +G DGP+ G D+ +P V PSD V AA + R C+ R R N Sbjct: 665 VGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCF-RYPRGNGI 723 Query: 215 TAILYPNDE--VFKVGQAKVLRQSAKDRVLLIGAGITLHXXXXXXXXXXXXGVEARVLDP 388 L PN + +VG+ +VL + +RV L+G G + G++ V D Sbjct: 724 GVPLPPNYKGVPLEVGKGRVLLEG--ERVALLGYGSAVQYCLAAASLVERHGLKVTVADA 781 Query: 389 FTIKPLDEAAVLENARAAEGRILVVEDHYQAGGVGEAVLSAVSL 520 KPLD+ + A + E +L+ + GG G V ++L Sbjct: 782 RFCKPLDQTLIRRLASSHE--VLLTVEEGSIGGFGSHVAQFMAL 823 >06_01_0237 - 1808203-1809159,1809246-1809399,1809488-1809636, 1809715-1809997,1810087-1810192,1810293-1810383, 1810779-1811270 Length = 743 Score = 40.3 bits (90), Expect = 0.001 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +2 Query: 29 SHCGVSIGEDGPSQMGLEDLAMFRTVPTATVFYPSDAVSTERAVELAANTR 181 +H + +GEDGP+ +E L FR +P + P+D T A ++A R Sbjct: 541 THDSIGLGEDGPTHQPIEHLVSFRAMPNILMLRPADGNETAGAYKIAVLNR 591 >04_03_0092 + 11079185-11079589,11081319-11081409,11081507-11081612, 11081694-11081976,11082062-11082210,11083582-11083735, 11083837-11084793 Length = 714 Score = 37.9 bits (84), Expect = 0.005 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +2 Query: 8 SNINLAGSHCGVSIGEDGPSQMGLEDLAMFRTVPTATVFYPSDAVSTERAVELAANTR 181 S + +H + +GEDGP+ +E L R +P + P+D T A ++A R Sbjct: 505 SRVIFVMTHDSIGLGEDGPTHQPVEQLFSLRAMPNILMLRPADGNETSGAYKIAVLNR 562 >06_01_0313 - 2250312-2250516,2250585-2250610,2250792-2251076, 2251289-2251567,2251817-2252121,2252581-2252860, 2253209-2253475 Length = 548 Score = 35.9 bits (79), Expect = 0.020 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 4/162 (2%) Frame = +2 Query: 47 IGEDGPSQMGLEDLAMFRTVPTATVFYPSDAVSTERAVELAA--NTRGIC--YIRTSRPN 214 +G +GP+ G D+ +P V PS+ V AA R IC Y + + Sbjct: 306 VGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVG 365 Query: 215 TAILYPNDEVFKVGQAKVLRQSAKDRVLLIGAGITLHXXXXXXXXXXXXGVEARVLDPFT 394 T+ ++G+ ++L + + + +G G + G++A V + Sbjct: 366 TSGTLAYGNPLEIGKGEILAEGKE--IAFLGYGDVVQRCLIARSLLFNFGIQATVANARF 423 Query: 395 IKPLDEAAVLENARAAEGRILVVEDHYQAGGVGEAVLSAVSL 520 KPLD L + L+ + GG G V +SL Sbjct: 424 CKPLD--IDLIRMLCQQHDFLITVEEGTVGGFGSHVSQFISL 463 >12_02_1121 + 26233881-26234000,26234138-26234175,26235840-26236812 Length = 376 Score = 33.1 bits (72), Expect = 0.14 Identities = 16/51 (31%), Positives = 30/51 (58%) Frame = +2 Query: 362 GVEARVLDPFTIKPLDEAAVLENARAAEGRILVVEDHYQAGGVGEAVLSAV 514 G + V+D ++KP D + N+ R+L+VE+ + GG+G ++ SA+ Sbjct: 279 GYDPEVIDIRSLKPFD-LHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAI 328 >09_04_0141 + 15036249-15036339,15036834-15037768,15037968-15038081 Length = 379 Score = 33.1 bits (72), Expect = 0.14 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = -3 Query: 208 SRSSDVTDASSVGCQFYCTLCRDCIRRVEDSSSRHCT 98 SR + T +SS +FYCT+C + + +E + CT Sbjct: 169 SRGAAATASSSASSEFYCTICMETVDAIERFAIPGCT 205 >03_05_0477 + 24707460-24707553,24707644-24707711,24707857-24707903, 24709188-24710160 Length = 393 Score = 33.1 bits (72), Expect = 0.14 Identities = 16/51 (31%), Positives = 30/51 (58%) Frame = +2 Query: 362 GVEARVLDPFTIKPLDEAAVLENARAAEGRILVVEDHYQAGGVGEAVLSAV 514 G + V+D ++KP D + N+ R+L+VE+ + GG+G ++ SA+ Sbjct: 296 GYDPEVIDIRSLKPFD-LHTIGNSIKKTHRVLIVEECMRTGGIGASLRSAI 345 >06_03_0570 - 22363197-22363588,22363755-22366782 Length = 1139 Score = 29.9 bits (64), Expect = 1.3 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = -3 Query: 502 HRLADTSRL--IMIFNNKYSSLSSPSILQNCSLVQWLD 395 H L S L +++ NN + P +L NCS +QWLD Sbjct: 220 HSLGSVSSLTYVVLANNSLTG-GIPPVLANCSSLQWLD 256 >01_06_1097 + 34507376-34507395,34509380-34511214,34511263-34511598, 34511800-34513691 Length = 1360 Score = 29.1 bits (62), Expect = 2.3 Identities = 12/39 (30%), Positives = 23/39 (58%) Frame = +2 Query: 368 EARVLDPFTIKPLDEAAVLENARAAEGRILVVEDHYQAG 484 E RV++ F ++ EA + ++ AA V+E+H++ G Sbjct: 839 EERVVENFNVQEKHEAVIFTDSDAALTGFHVIEEHFEVG 877 >12_02_1116 + 26189651-26190544 Length = 297 Score = 28.7 bits (61), Expect = 3.1 Identities = 18/41 (43%), Positives = 21/41 (51%) Frame = -2 Query: 371 PPHLLFSILQQQQVLRAA*FRLRSTTLGPLRTDGVLWPVQP 249 PPHL FS QQQ AA R G L+++ LWP P Sbjct: 201 PPHLAFSQEQQQHATVAAFDR------GTLQSNASLWPPPP 235 >03_01_0351 - 2758646-2759518 Length = 290 Score = 28.7 bits (61), Expect = 3.1 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +3 Query: 204 LDPTRLSCIPMMKYSRLDRPKYSVSPQRTECC*SE 308 LDP ++ +P++KY R K S SPQ C SE Sbjct: 85 LDPDVVAALPVVKYRRAASGK-SASPQECAVCLSE 118 >11_06_0754 - 26935647-26937780,26940890-26941827 Length = 1023 Score = 28.3 bits (60), Expect = 4.1 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 5/86 (5%) Frame = -3 Query: 310 GSDQQHSVLCGLTEYFGLSNLEYFIIGIQDSRVGSRSSDVTDASSVGCQFYC-TLCRDCI 134 G DQ+ ++ G+ +GL + I G + R+ ++ G C ++ C+ Sbjct: 915 GVDQESTIPVGIQYLYGLKEISVKIGGADPEKYDRRAEELAFMIDSGLHDRCMSITLQCV 974 Query: 133 RRV----EDSSSRHCTEHGKVLQSHL 68 R++ ED SS E K+ Q + Sbjct: 975 RQMFDFNEDKSSLTHEEQRKLKQQEI 1000 >02_04_0138 - 20144653-20144685,20144992-20145081,20145405-20145489, 20146859-20146922,20149388-20149628 Length = 170 Score = 28.3 bits (60), Expect = 4.1 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = -3 Query: 238 IIGIQDSRVGSRSSDVTDASSVGCQFYCTLCRDCIRRVED--SSSRHCT 98 + + D V + + D S C + + C++R+ED + +HCT Sbjct: 99 VASMSDEEVSDPKALLEDRSKAKCVYQWYEYQKCVKRIEDDETGQKHCT 147 >06_01_0418 - 2979418-2981404,2984505-2986469,2987164-2988053 Length = 1613 Score = 27.9 bits (59), Expect = 5.4 Identities = 9/24 (37%), Positives = 14/24 (58%) Frame = +1 Query: 271 PSVRKGPSVVDRSRNHAARSTCCC 342 P +KG ++ +RN +TCCC Sbjct: 974 PDNKKGSRIIVTTRNEDVANTCCC 997 >03_05_0136 + 21158917-21159939,21160183-21160241,21160259-21160294, 21160345-21160387,21160582-21160698,21162090-21162179, 21162329-21162436,21162547-21162588 Length = 505 Score = 27.9 bits (59), Expect = 5.4 Identities = 21/69 (30%), Positives = 30/69 (43%) Frame = -1 Query: 312 PAPINNTRSFAD*RSTLACPTLNTSSLGYKIAVLGLEVLM*QMPRVLAANSTARSVETAS 133 PAP +T S + +T L SL A L + ++PR A++ AR V A Sbjct: 81 PAPAASTPSSSSSVATTLADHLAEDSLDAPPAALSRQRSCTELPRFADADAEARKVVVAR 140 Query: 132 DG*KTVAVG 106 G A+G Sbjct: 141 SGGHASAIG 149 >12_02_0347 + 17808819-17809386,17809920-17810005,17810596-17810628 Length = 228 Score = 27.5 bits (58), Expect = 7.1 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +2 Query: 380 LDPFTIKPLDEAAVLENARAAEGRILVVEDHYQAGGVGEA 499 +DP + P +E L + +G+ LV++ G GEA Sbjct: 1 MDPSAMNPSEEGKALGMDPSGQGKALVIQPAVNPSGEGEA 40 >01_06_0141 - 26905855-26906928 Length = 357 Score = 27.5 bits (58), Expect = 7.1 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = -2 Query: 455 VFFPQQPE-HSPELQPRPMA-*W*TGPTHEPP 366 +F PQ P SP+L P PMA + T TH PP Sbjct: 117 LFSPQIPNLSSPKLSPTPMAGRYYTPQTHPPP 148 >08_02_1125 + 24488073-24488244,24488358-24488398,24488621-24488889, 24489061-24489157,24489407-24489753,24489816-24490173, 24490319-24490894,24491374-24491649 Length = 711 Score = 27.1 bits (57), Expect = 9.4 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +3 Query: 18 TLPVHTAESASERTVRVRWDWRTLPCSVQCLLLLS 122 T+ A SAS R R RW WRT +V LL+ S Sbjct: 3 TMASAAAASASARRWRWRWKWRTRD-AVLALLIAS 36 >02_05_0110 + 25914110-25915006,25915726-25915797,25916411-25916699, 25916864-25916949,25917267-25917490,25917674-25917740, 25917830-25917889,25917995-25918078,25918475-25918555 Length = 619 Score = 27.1 bits (57), Expect = 9.4 Identities = 20/81 (24%), Positives = 34/81 (41%) Frame = +3 Query: 78 WRTLPCSVQCLLLLSSTRLMQSLQSVQ*NWQPTLEASVTSELLDPTRLSCIPMMKYSRLD 257 W + L MQ L+ VQ N +S+ L DP + + +M ++ Sbjct: 142 WTKIASDPTTRAYLEQPDFMQMLRDVQRN-----PSSLNMYLSDPRMMQVLGLMLNIKIQ 196 Query: 258 RPKYSVSPQRTECC*SEPESR 320 RP+ S S Q + S+P+ + Sbjct: 197 RPEASESSQPSSSPPSQPQEQ 217 >02_02_0235 + 8114606-8114806,8116530-8116692,8116785-8116887, 8118584-8118650,8119923-8120486 Length = 365 Score = 27.1 bits (57), Expect = 9.4 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +3 Query: 261 PKYSVSPQRTECC*SEP 311 P Y + Q TECC SEP Sbjct: 123 PSYRCAEQETECCSSEP 139 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,982,755 Number of Sequences: 37544 Number of extensions: 289308 Number of successful extensions: 915 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 890 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 913 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1178343540 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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