Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0982
         (531 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   2.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   4.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   8.4  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 470 DLQQQVFFPQQPEHSPELQPRP 405
           DLQQ+    +Q +H P  QP P
Sbjct: 118 DLQQKNQMKRQQQHQPPQQPGP 139


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +2

Query: 374  RVLDPFTIKPL--DEAAVLENARAAEGRI-LVVEDHYQAGGVGEAVLSAV 514
            ++L     KP+  D++       A + +I ++VED     GVGE  L+ +
Sbjct: 1056 QILQDIQSKPIVIDDSEFAGKLHAVQEKIDILVEDAKSGSGVGEKTLNEI 1105


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 476 DNDLQQQVFFPQQPEHSPELQPRP 405
           +N L+      QQP+  P  QP+P
Sbjct: 274 NNGLRAPPSSQQQPQQQPSQQPQP 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,184
Number of Sequences: 2352
Number of extensions: 12341
Number of successful extensions: 46
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)