Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0981
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   3.9  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    24   3.9  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   6.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   6.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.1  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 286 WSFINSSTKPLASKFFLWPFFEICLLASFSV 194
           W F++     +  +FFLW F   C+  +F +
Sbjct: 454 WKFVSM----VLDRFFLWVFTISCIFGTFGI 480


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -2

Query: 385 ICVFSKIWSLILVGPDMYL-LQYSQKNPFLTSLMWSFINSSTKPLASKFFLWPFFEICLL 209
           IC    IW  + +    Y+ + Y Q+N       W  ++ +   + S + + PF  + + 
Sbjct: 140 ICHTISIWLTVTLAIWRYIAVAYPQRNR-----QWCDMSKTLAAIFSSYVVCPFLAVPIY 194

Query: 208 ASFSV 194
            SFS+
Sbjct: 195 LSFSI 199


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 309 FFCEYCNKYIS--GPTKIRLHILENTHINN 392
           ++C+YC+ Y++   P+  + H     H +N
Sbjct: 4   YYCDYCDTYLTHDSPSVRKTHCTGRKHKDN 33


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 207 HPSQWGSNCHRQDSRSGLSP 148
           HP    S+C  QDS S  SP
Sbjct: 252 HPYHTDSDCSTQDSTSAPSP 271


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 207 HPSQWGSNCHRQDSRSGLSP 148
           HP    S+C  QDS S  SP
Sbjct: 252 HPYHTDSDCSTQDSTSAPSP 271


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +2

Query: 44   YSVYLSIISCFKYSSWFTFTNLKDDTEAEQE---CDL 145
            Y +Y+ II+ F  + +  F  +    E EQE   CDL
Sbjct: 1102 YIIYIIIIAFFMVNIFVGFVIVTFQNEGEQEYKNCDL 1138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,098
Number of Sequences: 2352
Number of extensions: 16419
Number of successful extensions: 246
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)