BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0981 (689 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF106573-10|AAC78155.2| 862|Caenorhabditis elegans Gex interact... 33 0.25 Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 32 0.44 Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical p... 31 0.59 Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 31 0.78 Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 31 1.0 Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 31 1.0 AC084197-1|AAG23478.1| 328|Caenorhabditis elegans Serpentine re... 30 1.4 U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 30 1.8 AC006748-2|AAF60515.2| 215|Caenorhabditis elegans Hypothetical ... 30 1.8 AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 29 2.4 AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 2.4 U56963-12|AAB38128.1| 341|Caenorhabditis elegans Serpentine rec... 29 3.1 AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine re... 29 3.1 U56963-11|AAB38127.1| 342|Caenorhabditis elegans Serpentine rec... 29 4.1 AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 29 4.1 AC084197-6|AAO38572.1| 328|Caenorhabditis elegans Serpentine re... 29 4.1 U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical pr... 28 7.2 U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila odd-... 28 7.2 Z81583-6|CAB04674.1| 397|Caenorhabditis elegans Hypothetical pr... 27 9.6 U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical pr... 27 9.6 AL132851-2|CAB60412.1| 180|Caenorhabditis elegans Hypothetical ... 27 9.6 AF106573-8|ABC48249.1| 309|Caenorhabditis elegans Hypothetical ... 27 9.6 AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine r... 27 9.6 >AF106573-10|AAC78155.2| 862|Caenorhabditis elegans Gex interacting protein protein 12 protein. Length = 862 Score = 32.7 bits (71), Expect = 0.25 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Frame = +3 Query: 156 VHSCCLVCGNY-FPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNK 332 VH CL GN F + + H KKGHK N A+G +E IN + + + N+ Sbjct: 212 VHQQCL--GNKSFNAQAGVHGHAFKKGHKDNKNASG--KEVINSSLVQKHDAIKSRNLNQ 267 Query: 333 YISGPTKIRLHILENTHINNKGIRNLERVGNN 428 SG ++N ++ R R +N Sbjct: 268 SFSGFPTHETSSMKNQQQKSRNDRKKSRGSSN 299 >Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical protein F58G1.2 protein. Length = 445 Score = 31.9 bits (69), Expect = 0.44 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = +3 Query: 291 REVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAW 470 R +GF C CN+ P K+R H + H+ ++ + ++ VTI + Sbjct: 309 RGYHSGFRCPDCNQKFLTPRKLRKH-RKMAHVFSRTFQ-CHFCEEFFISDTAVTIHERVH 366 Query: 471 HGIVGHTCLICNIKFGD-MEIHISTKEH 551 GI+ C +C+ + +++ TKEH Sbjct: 367 TGILKFECTVCDFRASRYLQMEEHTKEH 394 >Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical protein F55C5.11 protein. Length = 205 Score = 31.5 bits (68), Expect = 0.59 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = +3 Query: 63 LSRVLSTAAGSHSRTSKMIPKLNRNAILVGKVHSCCLV-CGNYFPTEKDANRHISKKGHK 239 L R ++ S S K K++ +A+ + ++H+C + CG F + + NRH S K Sbjct: 103 LKRRVACDICSKSFCDKGALKIHTSAVHLREMHTCTVTGCGKQFSSRRSRNRHSSNNNPK 162 Query: 240 KNL 248 ++ Sbjct: 163 LHM 165 >Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical protein K12G11.4 protein. Length = 351 Score = 31.1 bits (67), Expect = 0.78 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%) Frame = +3 Query: 216 HISKKGHKKNLEANGFVEEF----INDHIREVKNG 308 HISK+ H +NL A FV+ F I HIR++ NG Sbjct: 206 HISKEDHCRNLGAEWFVDAFDTPDIVAHIRKLTNG 240 >Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical protein T09F3.1 protein. Length = 355 Score = 30.7 bits (66), Expect = 1.0 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 96 HSRTSKMIPKLNRNAIL-VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEE 272 H + + ++ L+R+A L K CC CG F A+ HI + + L+ + F E Sbjct: 221 HGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLASTHIKEVHGEPKLQPHDFAAE 280 Query: 273 FINDHIR 293 ++ R Sbjct: 281 LREEYRR 287 >Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical protein T09F3.1 protein. Length = 355 Score = 30.7 bits (66), Expect = 1.0 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = +3 Query: 96 HSRTSKMIPKLNRNAIL-VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEE 272 H + + ++ L+R+A L K CC CG F A+ HI + + L+ + F E Sbjct: 221 HGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLASTHIKEVHGEPKLQPHDFAAE 280 Query: 273 FINDHIR 293 ++ R Sbjct: 281 LREEYRR 287 >AC084197-1|AAG23478.1| 328|Caenorhabditis elegans Serpentine receptor, class v protein24 protein. Length = 328 Score = 30.3 bits (65), Expect = 1.4 Identities = 16/68 (23%), Positives = 34/68 (50%) Frame = +3 Query: 333 YISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIK 512 Y PT I L +L++T+ + ++ + V +N +A +V TC++C++ Sbjct: 131 YWGVPTLISLVVLKDTNFKYDSLESMSIIAEQEVIKRNTLMALI----VVSLTCILCSLA 186 Query: 513 FGDMEIHI 536 +G + +I Sbjct: 187 YGALFYYI 194 >U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical protein ZC395.8 protein. Length = 687 Score = 29.9 bits (64), Expect = 1.8 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +3 Query: 177 CGNYFPTEKDANRHISKKGHKKNLE--ANGFVEEFIN 281 C F T+++ N H SK GHK++ + N ++++ I+ Sbjct: 36 CDMGFYTQQELNAHCSKHGHKRSFQKTVNPYIDKMIS 72 >AC006748-2|AAF60515.2| 215|Caenorhabditis elegans Hypothetical protein Y39A3B.3 protein. Length = 215 Score = 29.9 bits (64), Expect = 1.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 147 LRSHSCSASVSSLRFVNVNQLLYLKHEIIDKYTE 46 ++ C S LRF Q+ YLK+EII+ ++E Sbjct: 66 MKQDICGHGASELRFTLKTQIKYLKNEIINFFSE 99 >AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical protein Y111B2A.10b protein. Length = 312 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/66 (24%), Positives = 27/66 (40%) Frame = +3 Query: 168 CLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNKYISGP 347 C VCG F + + RH+ +K + N +I+ K+ + C C K + Sbjct: 194 CQVCGESFASRQSMLRHVGRKHPDAKNDPNVTAVRYIS--AESPKHPYACIECGKRFTTV 251 Query: 348 TKIRLH 365 T + H Sbjct: 252 TALSTH 257 >AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical protein Y111B2A.10a protein. Length = 430 Score = 29.5 bits (63), Expect = 2.4 Identities = 16/66 (24%), Positives = 27/66 (40%) Frame = +3 Query: 168 CLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNKYISGP 347 C VCG F + + RH+ +K + N +I+ K+ + C C K + Sbjct: 312 CQVCGESFASRQSMLRHVGRKHPDAKNDPNVTAVRYIS--AESPKHPYACIECGKRFTTV 369 Query: 348 TKIRLH 365 T + H Sbjct: 370 TALSTH 375 >U56963-12|AAB38128.1| 341|Caenorhabditis elegans Serpentine receptor, class v protein33 protein. Length = 341 Score = 29.1 bits (62), Expect = 3.1 Identities = 15/64 (23%), Positives = 32/64 (50%) Frame = +3 Query: 345 PTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIKFGDM 524 PT I +L++T + + + + V +N +A +VG TC++C++ +G + Sbjct: 150 PTVISAVVLKDTDFSYDSFERMAIIADQDVIQRNTLMALV----VVGLTCILCSLAYGAL 205 Query: 525 EIHI 536 +I Sbjct: 206 FYYI 209 >AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine receptor, class w protein40 protein. Length = 363 Score = 29.1 bits (62), Expect = 3.1 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -1 Query: 335 VLVTVFTEES----VFDLPNVVIYKFFHEAVSFQILLVAFFRNMSVSILLS 195 +L F+EES VF V +F+ + VSF I V FF N+ I+LS Sbjct: 10 ILFENFSEESRNFWVFIYLKVRCIRFYADFVSFTICFVGFFANIVHLIILS 60 >U56963-11|AAB38127.1| 342|Caenorhabditis elegans Serpentine receptor, class v protein32 protein. Length = 342 Score = 28.7 bits (61), Expect = 4.1 Identities = 17/81 (20%), Positives = 38/81 (46%) Frame = +3 Query: 294 EVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWH 473 +V+N + Y S PT I + +L++ + + + + V +N +A Sbjct: 129 KVQNASKLQIITVYWSVPTIISIVVLKDYKFSYDNLEAMSIIAEQDVIKRNTLMALI--- 185 Query: 474 GIVGHTCLICNIKFGDMEIHI 536 +V TC++C++ +G + +I Sbjct: 186 -VVSLTCILCSVLYGSLFYYI 205 >AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical protein C27A12.2 protein. Length = 625 Score = 28.7 bits (61), Expect = 4.1 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 309 FFCEYCNKYISGPTKIRLHILENT 380 + C CNK+I P+KI HI ++T Sbjct: 71 YHCVQCNKHIKYPSKITEHIRKHT 94 Score = 27.9 bits (59), Expect = 7.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +3 Query: 315 CEYCNKYISGPTKIRLHILENTHINNK 395 CEYC + P+KIR H+ TH K Sbjct: 453 CEYCGRVDKYPSKIRAHM--RTHTGEK 477 >AC084197-6|AAO38572.1| 328|Caenorhabditis elegans Serpentine receptor, class v protein25 protein. Length = 328 Score = 28.7 bits (61), Expect = 4.1 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = +3 Query: 345 PTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIKFGDM 524 PT I L +L++ + + I + V V +N +A +VG TC +C+I +G + Sbjct: 148 PTIISLVVLKDINFHYDNIVVMTVVAEKSVIQRNTLMALI----VVGLTCALCSISYGAL 203 Query: 525 EIHI-STKEHLFKLVQTEVKFA 587 + I + K + E+ A Sbjct: 204 FLFIRKHSNRISKSLSREIHLA 225 >U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical protein F53B3.1 protein. Length = 543 Score = 27.9 bits (59), Expect = 7.2 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%) Frame = +3 Query: 291 REVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAW 470 R +GF C +CN P K+R H + +H+ K + I + + Sbjct: 407 RGANSGFRCSFCNMKFLTPRKLRKH-KKMSHVFTKTFQC--HFCEEIFISEVAVMTHERM 463 Query: 471 H-GIVGHTCLICNIK 512 H GI+ C +C+ + Sbjct: 464 HTGIIKFECKVCDFR 478 >U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila odd-skipped-like protein1 protein. Length = 242 Score = 27.9 bits (59), Expect = 7.2 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%) Frame = +3 Query: 279 NDHIRE-VKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTI 455 N+ IR+ K F C+YC ++ + + +H E TH N + + E G + ++ Sbjct: 117 NNAIRKRPKKEFICKYCARHFTKSYNLMIH--ERTHTNERPF-HCETCGKSFRRQDHLRD 173 Query: 456 AKAAWHGIVGHTCLICNIKF 515 K H C IC F Sbjct: 174 HKYIHAKEKPHKCEICGKGF 193 >Z81583-6|CAB04674.1| 397|Caenorhabditis elegans Hypothetical protein T02G6.6 protein. Length = 397 Score = 27.5 bits (58), Expect = 9.6 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 36 LTHILCIYLLSRVLSTAAGSHSRTSKMIPKLNRNAILVGK 155 L +LCI + ++ + K IP+LNRN IL K Sbjct: 88 LVSVLCICICICIVKYTVDNLDWPHKSIPRLNRNIILFKK 127 >U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical protein C24B5.1 protein. Length = 427 Score = 27.5 bits (58), Expect = 9.6 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = -2 Query: 406 FRMPLLLICVFSKIWSLILVGPDMYLLQY 320 F L +C F+ +W ++LVG + LL Y Sbjct: 160 FNTFLAHVCDFASVWLIVLVGLERLLLLY 188 >AL132851-2|CAB60412.1| 180|Caenorhabditis elegans Hypothetical protein Y53H1B.4 protein. Length = 180 Score = 27.5 bits (58), Expect = 9.6 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = +3 Query: 180 GNYFPTEKDANRHISKKGHKKNLE---ANGFVE-EFINDHIREVKNGFFCEY 323 G F E NR +S KG + + F++ E I+ R + GF+CEY Sbjct: 88 GIMFMVENHMNRFVSVKGSQDETGYEISQCFLQFETISPKSRHIVGGFYCEY 139 >AF106573-8|ABC48249.1| 309|Caenorhabditis elegans Hypothetical protein F52D2.8b protein. Length = 309 Score = 27.5 bits (58), Expect = 9.6 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Frame = +3 Query: 147 VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCE-- 320 + K H ++ GN+ K + ++ KGHKK ++ + F+E D +K+ E Sbjct: 66 IRKDHIDLILDGNWIRYRKRGST-VTYKGHKKQIKGDNFMETAFKDLKTSLKHVSKLEIY 124 Query: 321 YC--NKY 335 YC N+Y Sbjct: 125 YCIPNRY 131 >AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine receptor, class t protein7 protein. Length = 353 Score = 27.5 bits (58), Expect = 9.6 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = -2 Query: 472 CQAALAIVTFLKATILFPTLSRFRMPL----LLICVFSKIWSLILVGPDMYLLQYS 317 C LA+ ++ FP FR + L+ + WSL+ V P ++ LQYS Sbjct: 124 CSIFLAVERCVEINPKFPLEFIFRKRVFRFVLVAMIMLSFWSLVCVKPVLFSLQYS 179 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,952,896 Number of Sequences: 27780 Number of extensions: 379985 Number of successful extensions: 1287 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1221 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1285 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1581836700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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