Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0981
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106573-10|AAC78155.2| 862|Caenorhabditis elegans Gex interact... 33 0.25
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical p... 31 0.59
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 31 1.0
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 31 1.0
AC084197-1|AAG23478.1| 328|Caenorhabditis elegans Serpentine re... 30 1.4
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC006748-2|AAF60515.2| 215|Caenorhabditis elegans Hypothetical ... 30 1.8
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 29 2.4
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 2.4
U56963-12|AAB38128.1| 341|Caenorhabditis elegans Serpentine rec... 29 3.1
AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine re... 29 3.1
U56963-11|AAB38127.1| 342|Caenorhabditis elegans Serpentine rec... 29 4.1
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 29 4.1
AC084197-6|AAO38572.1| 328|Caenorhabditis elegans Serpentine re... 29 4.1
U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical pr... 28 7.2
U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila odd-... 28 7.2
Z81583-6|CAB04674.1| 397|Caenorhabditis elegans Hypothetical pr... 27 9.6
U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL132851-2|CAB60412.1| 180|Caenorhabditis elegans Hypothetical ... 27 9.6
AF106573-8|ABC48249.1| 309|Caenorhabditis elegans Hypothetical ... 27 9.6
AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine r... 27 9.6
>AF106573-10|AAC78155.2| 862|Caenorhabditis elegans Gex interacting
protein protein 12 protein.
Length = 862
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +3
Query: 156 VHSCCLVCGNY-FPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNK 332
VH CL GN F + + H KKGHK N A+G +E IN + + + N+
Sbjct: 212 VHQQCL--GNKSFNAQAGVHGHAFKKGHKDNKNASG--KEVINSSLVQKHDAIKSRNLNQ 267
Query: 333 YISGPTKIRLHILENTHINNKGIRNLERVGNN 428
SG ++N ++ R R +N
Sbjct: 268 SFSGFPTHETSSMKNQQQKSRNDRKKSRGSSN 299
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 291 REVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAW 470
R +GF C CN+ P K+R H + H+ ++ + ++ VTI +
Sbjct: 309 RGYHSGFRCPDCNQKFLTPRKLRKH-RKMAHVFSRTFQ-CHFCEEFFISDTAVTIHERVH 366
Query: 471 HGIVGHTCLICNIKFGD-MEIHISTKEH 551
GI+ C +C+ + +++ TKEH
Sbjct: 367 TGILKFECTVCDFRASRYLQMEEHTKEH 394
>Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical
protein F55C5.11 protein.
Length = 205
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 63 LSRVLSTAAGSHSRTSKMIPKLNRNAILVGKVHSCCLV-CGNYFPTEKDANRHISKKGHK 239
L R ++ S S K K++ +A+ + ++H+C + CG F + + NRH S K
Sbjct: 103 LKRRVACDICSKSFCDKGALKIHTSAVHLREMHTCTVTGCGKQFSSRRSRNRHSSNNNPK 162
Query: 240 KNL 248
++
Sbjct: 163 LHM 165
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = +3
Query: 216 HISKKGHKKNLEANGFVEEF----INDHIREVKNG 308
HISK+ H +NL A FV+ F I HIR++ NG
Sbjct: 206 HISKEDHCRNLGAEWFVDAFDTPDIVAHIRKLTNG 240
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 96 HSRTSKMIPKLNRNAIL-VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEE 272
H + + ++ L+R+A L K CC CG F A+ HI + + L+ + F E
Sbjct: 221 HGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLASTHIKEVHGEPKLQPHDFAAE 280
Query: 273 FINDHIR 293
++ R
Sbjct: 281 LREEYRR 287
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 96 HSRTSKMIPKLNRNAIL-VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEE 272
H + + ++ L+R+A L K CC CG F A+ HI + + L+ + F E
Sbjct: 221 HGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLASTHIKEVHGEPKLQPHDFAAE 280
Query: 273 FINDHIR 293
++ R
Sbjct: 281 LREEYRR 287
>AC084197-1|AAG23478.1| 328|Caenorhabditis elegans Serpentine
receptor, class v protein24 protein.
Length = 328
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +3
Query: 333 YISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIK 512
Y PT I L +L++T+ + ++ + V +N +A +V TC++C++
Sbjct: 131 YWGVPTLISLVVLKDTNFKYDSLESMSIIAEQEVIKRNTLMALI----VVSLTCILCSLA 186
Query: 513 FGDMEIHI 536
+G + +I
Sbjct: 187 YGALFYYI 194
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 177 CGNYFPTEKDANRHISKKGHKKNLE--ANGFVEEFIN 281
C F T+++ N H SK GHK++ + N ++++ I+
Sbjct: 36 CDMGFYTQQELNAHCSKHGHKRSFQKTVNPYIDKMIS 72
>AC006748-2|AAF60515.2| 215|Caenorhabditis elegans Hypothetical
protein Y39A3B.3 protein.
Length = 215
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 147 LRSHSCSASVSSLRFVNVNQLLYLKHEIIDKYTE 46
++ C S LRF Q+ YLK+EII+ ++E
Sbjct: 66 MKQDICGHGASELRFTLKTQIKYLKNEIINFFSE 99
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +3
Query: 168 CLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNKYISGP 347
C VCG F + + RH+ +K + N +I+ K+ + C C K +
Sbjct: 194 CQVCGESFASRQSMLRHVGRKHPDAKNDPNVTAVRYIS--AESPKHPYACIECGKRFTTV 251
Query: 348 TKIRLH 365
T + H
Sbjct: 252 TALSTH 257
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = +3
Query: 168 CLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNKYISGP 347
C VCG F + + RH+ +K + N +I+ K+ + C C K +
Sbjct: 312 CQVCGESFASRQSMLRHVGRKHPDAKNDPNVTAVRYIS--AESPKHPYACIECGKRFTTV 369
Query: 348 TKIRLH 365
T + H
Sbjct: 370 TALSTH 375
>U56963-12|AAB38128.1| 341|Caenorhabditis elegans Serpentine
receptor, class v protein33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/64 (23%), Positives = 32/64 (50%)
Frame = +3
Query: 345 PTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIKFGDM 524
PT I +L++T + + + + V +N +A +VG TC++C++ +G +
Sbjct: 150 PTVISAVVLKDTDFSYDSFERMAIIADQDVIQRNTLMALV----VVGLTCILCSLAYGAL 205
Query: 525 EIHI 536
+I
Sbjct: 206 FYYI 209
>AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine
receptor, class w protein40 protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -1
Query: 335 VLVTVFTEES----VFDLPNVVIYKFFHEAVSFQILLVAFFRNMSVSILLS 195
+L F+EES VF V +F+ + VSF I V FF N+ I+LS
Sbjct: 10 ILFENFSEESRNFWVFIYLKVRCIRFYADFVSFTICFVGFFANIVHLIILS 60
>U56963-11|AAB38127.1| 342|Caenorhabditis elegans Serpentine
receptor, class v protein32 protein.
Length = 342
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = +3
Query: 294 EVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWH 473
+V+N + Y S PT I + +L++ + + + + V +N +A
Sbjct: 129 KVQNASKLQIITVYWSVPTIISIVVLKDYKFSYDNLEAMSIIAEQDVIKRNTLMALI--- 185
Query: 474 GIVGHTCLICNIKFGDMEIHI 536
+V TC++C++ +G + +I
Sbjct: 186 -VVSLTCILCSVLYGSLFYYI 205
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 309 FFCEYCNKYISGPTKIRLHILENT 380
+ C CNK+I P+KI HI ++T
Sbjct: 71 YHCVQCNKHIKYPSKITEHIRKHT 94
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 315 CEYCNKYISGPTKIRLHILENTHINNK 395
CEYC + P+KIR H+ TH K
Sbjct: 453 CEYCGRVDKYPSKIRAHM--RTHTGEK 477
>AC084197-6|AAO38572.1| 328|Caenorhabditis elegans Serpentine
receptor, class v protein25 protein.
Length = 328
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 345 PTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIKFGDM 524
PT I L +L++ + + I + V V +N +A +VG TC +C+I +G +
Sbjct: 148 PTIISLVVLKDINFHYDNIVVMTVVAEKSVIQRNTLMALI----VVGLTCALCSISYGAL 203
Query: 525 EIHI-STKEHLFKLVQTEVKFA 587
+ I + K + E+ A
Sbjct: 204 FLFIRKHSNRISKSLSREIHLA 225
>U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical
protein F53B3.1 protein.
Length = 543
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 291 REVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAW 470
R +GF C +CN P K+R H + +H+ K + I + +
Sbjct: 407 RGANSGFRCSFCNMKFLTPRKLRKH-KKMSHVFTKTFQC--HFCEEIFISEVAVMTHERM 463
Query: 471 H-GIVGHTCLICNIK 512
H GI+ C +C+ +
Sbjct: 464 HTGIIKFECKVCDFR 478
>U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila
odd-skipped-like protein1 protein.
Length = 242
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 279 NDHIRE-VKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTI 455
N+ IR+ K F C+YC ++ + + +H E TH N + + E G + ++
Sbjct: 117 NNAIRKRPKKEFICKYCARHFTKSYNLMIH--ERTHTNERPF-HCETCGKSFRRQDHLRD 173
Query: 456 AKAAWHGIVGHTCLICNIKF 515
K H C IC F
Sbjct: 174 HKYIHAKEKPHKCEICGKGF 193
>Z81583-6|CAB04674.1| 397|Caenorhabditis elegans Hypothetical
protein T02G6.6 protein.
Length = 397
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 36 LTHILCIYLLSRVLSTAAGSHSRTSKMIPKLNRNAILVGK 155
L +LCI + ++ + K IP+LNRN IL K
Sbjct: 88 LVSVLCICICICIVKYTVDNLDWPHKSIPRLNRNIILFKK 127
>U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical
protein C24B5.1 protein.
Length = 427
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 406 FRMPLLLICVFSKIWSLILVGPDMYLLQY 320
F L +C F+ +W ++LVG + LL Y
Sbjct: 160 FNTFLAHVCDFASVWLIVLVGLERLLLLY 188
>AL132851-2|CAB60412.1| 180|Caenorhabditis elegans Hypothetical
protein Y53H1B.4 protein.
Length = 180
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 180 GNYFPTEKDANRHISKKGHKKNLE---ANGFVE-EFINDHIREVKNGFFCEY 323
G F E NR +S KG + + F++ E I+ R + GF+CEY
Sbjct: 88 GIMFMVENHMNRFVSVKGSQDETGYEISQCFLQFETISPKSRHIVGGFYCEY 139
>AF106573-8|ABC48249.1| 309|Caenorhabditis elegans Hypothetical
protein F52D2.8b protein.
Length = 309
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 147 VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCE-- 320
+ K H ++ GN+ K + ++ KGHKK ++ + F+E D +K+ E
Sbjct: 66 IRKDHIDLILDGNWIRYRKRGST-VTYKGHKKQIKGDNFMETAFKDLKTSLKHVSKLEIY 124
Query: 321 YC--NKY 335
YC N+Y
Sbjct: 125 YCIPNRY 131
>AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine
receptor, class t protein7 protein.
Length = 353
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = -2
Query: 472 CQAALAIVTFLKATILFPTLSRFRMPL----LLICVFSKIWSLILVGPDMYLLQYS 317
C LA+ ++ FP FR + L+ + WSL+ V P ++ LQYS
Sbjct: 124 CSIFLAVERCVEINPKFPLEFIFRKRVFRFVLVAMIMLSFWSLVCVKPVLFSLQYS 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,952,896
Number of Sequences: 27780
Number of extensions: 379985
Number of successful extensions: 1287
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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