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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0981
         (689 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106573-10|AAC78155.2|  862|Caenorhabditis elegans Gex interact...    33   0.25 
Z81556-2|CAB04525.2|  445|Caenorhabditis elegans Hypothetical pr...    32   0.44 
Z78198-12|CAJ85750.1|  205|Caenorhabditis elegans Hypothetical p...    31   0.59 
Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z49908-11|CAA90104.2|  355|Caenorhabditis elegans Hypothetical p...    31   1.0  
Z49070-5|CAA88872.2|  355|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AC084197-1|AAG23478.1|  328|Caenorhabditis elegans Serpentine re...    30   1.4  
U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AC006748-2|AAF60515.2|  215|Caenorhabditis elegans Hypothetical ...    30   1.8  
AL132904-23|CAC35839.2|  312|Caenorhabditis elegans Hypothetical...    29   2.4  
AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical ...    29   2.4  
U56963-12|AAB38128.1|  341|Caenorhabditis elegans Serpentine rec...    29   3.1  
AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine re...    29   3.1  
U56963-11|AAB38127.1|  342|Caenorhabditis elegans Serpentine rec...    29   4.1  
AF003137-3|AAB93640.1|  625|Caenorhabditis elegans Hypothetical ...    29   4.1  
AC084197-6|AAO38572.1|  328|Caenorhabditis elegans Serpentine re...    29   4.1  
U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U10438-3|AAA19082.2|  242|Caenorhabditis elegans Drosophila odd-...    28   7.2  
Z81583-6|CAB04674.1|  397|Caenorhabditis elegans Hypothetical pr...    27   9.6  
U53149-5|AAA96121.2|  427|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL132851-2|CAB60412.1|  180|Caenorhabditis elegans Hypothetical ...    27   9.6  
AF106573-8|ABC48249.1|  309|Caenorhabditis elegans Hypothetical ...    27   9.6  
AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine r...    27   9.6  

>AF106573-10|AAC78155.2|  862|Caenorhabditis elegans Gex interacting
           protein protein 12 protein.
          Length = 862

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = +3

Query: 156 VHSCCLVCGNY-FPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNK 332
           VH  CL  GN  F  +   + H  KKGHK N  A+G  +E IN  + +  +       N+
Sbjct: 212 VHQQCL--GNKSFNAQAGVHGHAFKKGHKDNKNASG--KEVINSSLVQKHDAIKSRNLNQ 267

Query: 333 YISGPTKIRLHILENTHINNKGIRNLERVGNN 428
             SG        ++N    ++  R   R  +N
Sbjct: 268 SFSGFPTHETSSMKNQQQKSRNDRKKSRGSSN 299


>Z81556-2|CAB04525.2|  445|Caenorhabditis elegans Hypothetical
           protein F58G1.2 protein.
          Length = 445

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = +3

Query: 291 REVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAW 470
           R   +GF C  CN+    P K+R H  +  H+ ++  +         ++   VTI +   
Sbjct: 309 RGYHSGFRCPDCNQKFLTPRKLRKH-RKMAHVFSRTFQ-CHFCEEFFISDTAVTIHERVH 366

Query: 471 HGIVGHTCLICNIKFGD-MEIHISTKEH 551
            GI+   C +C+ +    +++   TKEH
Sbjct: 367 TGILKFECTVCDFRASRYLQMEEHTKEH 394


>Z78198-12|CAJ85750.1|  205|Caenorhabditis elegans Hypothetical
           protein F55C5.11 protein.
          Length = 205

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +3

Query: 63  LSRVLSTAAGSHSRTSKMIPKLNRNAILVGKVHSCCLV-CGNYFPTEKDANRHISKKGHK 239
           L R ++    S S   K   K++ +A+ + ++H+C +  CG  F + +  NRH S    K
Sbjct: 103 LKRRVACDICSKSFCDKGALKIHTSAVHLREMHTCTVTGCGKQFSSRRSRNRHSSNNNPK 162

Query: 240 KNL 248
            ++
Sbjct: 163 LHM 165


>Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical
           protein K12G11.4 protein.
          Length = 351

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
 Frame = +3

Query: 216 HISKKGHKKNLEANGFVEEF----INDHIREVKNG 308
           HISK+ H +NL A  FV+ F    I  HIR++ NG
Sbjct: 206 HISKEDHCRNLGAEWFVDAFDTPDIVAHIRKLTNG 240


>Z49908-11|CAA90104.2|  355|Caenorhabditis elegans Hypothetical
           protein T09F3.1 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +3

Query: 96  HSRTSKMIPKLNRNAIL-VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEE 272
           H + + ++  L+R+A L   K   CC  CG  F     A+ HI +   +  L+ + F  E
Sbjct: 221 HGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLASTHIKEVHGEPKLQPHDFAAE 280

Query: 273 FINDHIR 293
              ++ R
Sbjct: 281 LREEYRR 287


>Z49070-5|CAA88872.2|  355|Caenorhabditis elegans Hypothetical
           protein T09F3.1 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +3

Query: 96  HSRTSKMIPKLNRNAIL-VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEE 272
           H + + ++  L+R+A L   K   CC  CG  F     A+ HI +   +  L+ + F  E
Sbjct: 221 HGQYANLLNHLSRHARLHASKKQYCCPKCGASFTRRYLASTHIKEVHGEPKLQPHDFAAE 280

Query: 273 FINDHIR 293
              ++ R
Sbjct: 281 LREEYRR 287


>AC084197-1|AAG23478.1|  328|Caenorhabditis elegans Serpentine
           receptor, class v protein24 protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/68 (23%), Positives = 34/68 (50%)
 Frame = +3

Query: 333 YISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIK 512
           Y   PT I L +L++T+     + ++  +    V  +N  +A      +V  TC++C++ 
Sbjct: 131 YWGVPTLISLVVLKDTNFKYDSLESMSIIAEQEVIKRNTLMALI----VVSLTCILCSLA 186

Query: 513 FGDMEIHI 536
           +G +  +I
Sbjct: 187 YGALFYYI 194


>U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical
           protein ZC395.8 protein.
          Length = 687

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 177 CGNYFPTEKDANRHISKKGHKKNLE--ANGFVEEFIN 281
           C   F T+++ N H SK GHK++ +   N ++++ I+
Sbjct: 36  CDMGFYTQQELNAHCSKHGHKRSFQKTVNPYIDKMIS 72


>AC006748-2|AAF60515.2|  215|Caenorhabditis elegans Hypothetical
           protein Y39A3B.3 protein.
          Length = 215

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 147 LRSHSCSASVSSLRFVNVNQLLYLKHEIIDKYTE 46
           ++   C    S LRF    Q+ YLK+EII+ ++E
Sbjct: 66  MKQDICGHGASELRFTLKTQIKYLKNEIINFFSE 99


>AL132904-23|CAC35839.2|  312|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10b protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = +3

Query: 168 CLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNKYISGP 347
           C VCG  F + +   RH+ +K      + N     +I+      K+ + C  C K  +  
Sbjct: 194 CQVCGESFASRQSMLRHVGRKHPDAKNDPNVTAVRYIS--AESPKHPYACIECGKRFTTV 251

Query: 348 TKIRLH 365
           T +  H
Sbjct: 252 TALSTH 257


>AL132904-7|CAC35838.1|  430|Caenorhabditis elegans Hypothetical
           protein Y111B2A.10a protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/66 (24%), Positives = 27/66 (40%)
 Frame = +3

Query: 168 CLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCEYCNKYISGP 347
           C VCG  F + +   RH+ +K      + N     +I+      K+ + C  C K  +  
Sbjct: 312 CQVCGESFASRQSMLRHVGRKHPDAKNDPNVTAVRYIS--AESPKHPYACIECGKRFTTV 369

Query: 348 TKIRLH 365
           T +  H
Sbjct: 370 TALSTH 375


>U56963-12|AAB38128.1|  341|Caenorhabditis elegans Serpentine
           receptor, class v protein33 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/64 (23%), Positives = 32/64 (50%)
 Frame = +3

Query: 345 PTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIKFGDM 524
           PT I   +L++T  +      +  + +  V  +N  +A      +VG TC++C++ +G +
Sbjct: 150 PTVISAVVLKDTDFSYDSFERMAIIADQDVIQRNTLMALV----VVGLTCILCSLAYGAL 205

Query: 525 EIHI 536
             +I
Sbjct: 206 FYYI 209


>AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine
           receptor, class w protein40 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -1

Query: 335 VLVTVFTEES----VFDLPNVVIYKFFHEAVSFQILLVAFFRNMSVSILLS 195
           +L   F+EES    VF    V   +F+ + VSF I  V FF N+   I+LS
Sbjct: 10  ILFENFSEESRNFWVFIYLKVRCIRFYADFVSFTICFVGFFANIVHLIILS 60


>U56963-11|AAB38127.1|  342|Caenorhabditis elegans Serpentine
           receptor, class v protein32 protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/81 (20%), Positives = 38/81 (46%)
 Frame = +3

Query: 294 EVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWH 473
           +V+N    +    Y S PT I + +L++   +   +  +  +    V  +N  +A     
Sbjct: 129 KVQNASKLQIITVYWSVPTIISIVVLKDYKFSYDNLEAMSIIAEQDVIKRNTLMALI--- 185

Query: 474 GIVGHTCLICNIKFGDMEIHI 536
            +V  TC++C++ +G +  +I
Sbjct: 186 -VVSLTCILCSVLYGSLFYYI 205


>AF003137-3|AAB93640.1|  625|Caenorhabditis elegans Hypothetical
           protein C27A12.2 protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 309 FFCEYCNKYISGPTKIRLHILENT 380
           + C  CNK+I  P+KI  HI ++T
Sbjct: 71  YHCVQCNKHIKYPSKITEHIRKHT 94



 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 315 CEYCNKYISGPTKIRLHILENTHINNK 395
           CEYC +    P+KIR H+   TH   K
Sbjct: 453 CEYCGRVDKYPSKIRAHM--RTHTGEK 477


>AC084197-6|AAO38572.1|  328|Caenorhabditis elegans Serpentine
           receptor, class v protein25 protein.
          Length = 328

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +3

Query: 345 PTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGIVGHTCLICNIKFGDM 524
           PT I L +L++ + +   I  +  V    V  +N  +A      +VG TC +C+I +G +
Sbjct: 148 PTIISLVVLKDINFHYDNIVVMTVVAEKSVIQRNTLMALI----VVGLTCALCSISYGAL 203

Query: 525 EIHI-STKEHLFKLVQTEVKFA 587
            + I      + K +  E+  A
Sbjct: 204 FLFIRKHSNRISKSLSREIHLA 225


>U40414-1|AAA81404.2|  543|Caenorhabditis elegans Hypothetical
           protein F53B3.1 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = +3

Query: 291 REVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAW 470
           R   +GF C +CN     P K+R H  + +H+  K  +        I   +   +     
Sbjct: 407 RGANSGFRCSFCNMKFLTPRKLRKH-KKMSHVFTKTFQC--HFCEEIFISEVAVMTHERM 463

Query: 471 H-GIVGHTCLICNIK 512
           H GI+   C +C+ +
Sbjct: 464 HTGIIKFECKVCDFR 478


>U10438-3|AAA19082.2|  242|Caenorhabditis elegans Drosophila
           odd-skipped-like protein1 protein.
          Length = 242

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +3

Query: 279 NDHIRE-VKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTI 455
           N+ IR+  K  F C+YC ++ +    + +H  E TH N +   + E  G +     ++  
Sbjct: 117 NNAIRKRPKKEFICKYCARHFTKSYNLMIH--ERTHTNERPF-HCETCGKSFRRQDHLRD 173

Query: 456 AKAAWHGIVGHTCLICNIKF 515
            K        H C IC   F
Sbjct: 174 HKYIHAKEKPHKCEICGKGF 193


>Z81583-6|CAB04674.1|  397|Caenorhabditis elegans Hypothetical
           protein T02G6.6 protein.
          Length = 397

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 36  LTHILCIYLLSRVLSTAAGSHSRTSKMIPKLNRNAILVGK 155
           L  +LCI +   ++     +     K IP+LNRN IL  K
Sbjct: 88  LVSVLCICICICIVKYTVDNLDWPHKSIPRLNRNIILFKK 127


>U53149-5|AAA96121.2|  427|Caenorhabditis elegans Hypothetical
           protein C24B5.1 protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 406 FRMPLLLICVFSKIWSLILVGPDMYLLQY 320
           F   L  +C F+ +W ++LVG +  LL Y
Sbjct: 160 FNTFLAHVCDFASVWLIVLVGLERLLLLY 188


>AL132851-2|CAB60412.1|  180|Caenorhabditis elegans Hypothetical
           protein Y53H1B.4 protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = +3

Query: 180 GNYFPTEKDANRHISKKGHKKNLE---ANGFVE-EFINDHIREVKNGFFCEY 323
           G  F  E   NR +S KG +       +  F++ E I+   R +  GF+CEY
Sbjct: 88  GIMFMVENHMNRFVSVKGSQDETGYEISQCFLQFETISPKSRHIVGGFYCEY 139


>AF106573-8|ABC48249.1|  309|Caenorhabditis elegans Hypothetical
           protein F52D2.8b protein.
          Length = 309

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
 Frame = +3

Query: 147 VGKVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKNGFFCE-- 320
           + K H   ++ GN+    K  +  ++ KGHKK ++ + F+E    D    +K+    E  
Sbjct: 66  IRKDHIDLILDGNWIRYRKRGST-VTYKGHKKQIKGDNFMETAFKDLKTSLKHVSKLEIY 124

Query: 321 YC--NKY 335
           YC  N+Y
Sbjct: 125 YCIPNRY 131


>AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine
           receptor, class t protein7 protein.
          Length = 353

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = -2

Query: 472 CQAALAIVTFLKATILFPTLSRFRMPL----LLICVFSKIWSLILVGPDMYLLQYS 317
           C   LA+   ++    FP    FR  +    L+  +    WSL+ V P ++ LQYS
Sbjct: 124 CSIFLAVERCVEINPKFPLEFIFRKRVFRFVLVAMIMLSFWSLVCVKPVLFSLQYS 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,952,896
Number of Sequences: 27780
Number of extensions: 379985
Number of successful extensions: 1287
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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