Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0981
         (689 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g26610.2 68418.m03181 D111/G-patch domain-containing protein ...    30   1.3  
At5g26610.1 68418.m03180 D111/G-patch domain-containing protein ...    30   1.3  
At4g27220.1 68417.m03909 disease resistance protein (NBS-LRR cla...    30   1.3  
At1g53470.1 68414.m06061 mechanosensitive ion channel domain-con...    29   2.9  
At3g58760.1 68416.m06549 ankyrin protein kinase, putative simila...    29   3.8  
At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger) fa...    28   5.1  
At3g51520.1 68416.m05642 diacylglycerol acyltransferase family c...    28   5.1  
At5g39690.1 68418.m04806 no apical meristem (NAM) protein-relate...    28   6.7  
At2g43850.2 68415.m05452 ankyrin protein kinase, putative (APK1)...    28   6.7  
At2g43850.1 68415.m05451 ankyrin protein kinase, putative (APK1)...    28   6.7  
At2g31760.1 68415.m03878 zinc finger protein-related contains lo...    28   6.7  
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea...    27   8.9  
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta...    27   8.9  

>At5g26610.2 68418.m03181 D111/G-patch domain-containing protein
           contains Pfam PF01585: G-patch domain
          Length = 301

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = +3

Query: 267 EEFINDHIREVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERV 419
           E+ I   ++E++  F+CE C+K      +   H+    H + K  + ++ +
Sbjct: 147 EQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEM 197


>At5g26610.1 68418.m03180 D111/G-patch domain-containing protein
           contains Pfam PF01585: G-patch domain
          Length = 301

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = +3

Query: 267 EEFINDHIREVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERV 419
           E+ I   ++E++  F+CE C+K      +   H+    H + K  + ++ +
Sbjct: 147 EQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEM 197


>At4g27220.1 68417.m03909 disease resistance protein (NBS-LRR
           class), putative domain signature NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 919

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 279 NDHIREVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNL 410
           N H++EV NGF   + N  I   + +R+  L ++  N   +R+L
Sbjct: 503 NSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSL 546


>At1g53470.1 68414.m06061 mechanosensitive ion channel
           domain-containing protein / MS ion channel
           domain-containing protein contains Pfam profile PF00924:
           Mechanosensitive ion channel
          Length = 881

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +3

Query: 276 INDHIREVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNI 431
           ++ +   ++   F +Y  + +SGP +I +HI E    N+  ++  E VG  +
Sbjct: 404 MSTYFDRIQESLFTQYVIETLSGPPRIEIHIEEEKVAND--VKTFEIVGRKL 453


>At3g58760.1 68416.m06549 ankyrin protein kinase, putative similar
           to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674
          Length = 471

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +3

Query: 300 KNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGNNIVAFKNVTIAKAAWHGI 479
           KN    +   K+ + PT   +H+L +  +    I   E   +N V     T  KA+W GI
Sbjct: 126 KNHDVIKLLEKHGAKPTIAPMHVLTDKEVPEYEIHPTELDFSNSVKISKGTFNKASWRGI 185


>At5g41430.1 68418.m05032 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097 zinc
           finger, C3HC4 type (RING finger)
          Length = 161

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 324 CNKYISGPTKIRLHILENTH 383
           CNKYI  PT++ L   +N+H
Sbjct: 33  CNKYIQPPTELALETHQNSH 52


>At3g51520.1 68416.m05642 diacylglycerol acyltransferase family
           contains Pfam PF03982: Diacylglycerol acyltransferase
          Length = 314

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
 Frame = -3

Query: 402 GCPYY*YACFPKYGALFWWAPICTCY-SIHRRIRF*P 295
           G P     CF +     WW P C  Y  + R IRF P
Sbjct: 209 GSPLVPVFCFGQARVYKWWKPDCDLYLKLSRAIRFTP 245


>At5g39690.1 68418.m04806 no apical meristem (NAM) protein-related
           contains Pfam PF02365 : No apical meristem (NAM)
           protein;  similar to NAC domain protein NAC2
           (GI:21554255) {Arabidopsis thaliana}
          Length = 294

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/79 (22%), Positives = 31/79 (39%)
 Frame = +3

Query: 246 LEANGFVEEFINDHIREVKNGFFCEYCNKYISGPTKIRLHILENTHINNKGIRNLERVGN 425
           +   G + E +N  + +V      +   ++  G  K    I E   ++ +G+   +RVGN
Sbjct: 11  ISMGGIMWEGLNSSLIKVDEALLKQQIREFEKGNDKEWFIITERNKVD-QGLSQTKRVGN 69

Query: 426 NIVAFKNVTIAKAAWHGIV 482
                K V      WH  V
Sbjct: 70  GAKRQKRVDTNGGYWHATV 88


>At2g43850.2 68415.m05452 ankyrin protein kinase, putative (APK1)
           similar to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674;contains Pfam profile PF00069:
           Protein kinase domain; contains Pfam profile PF00023:
           Ankyrin repeat
          Length = 479

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -1

Query: 557 KEMLLSRNVNLHISKFNIADQAGMSNDSMPSCFGDSHIFESNYIISHSFQVSDALIIDMR 378
           K +LL R   L IS F +   + +S D        +HI  SNY I+   +V    I D+R
Sbjct: 323 KNILLDRGGQLKISGFGMIRLSKISQDKAKVANHKAHIDLSNYYIAP--EVYKDEIFDLR 380

Query: 377 V 375
           V
Sbjct: 381 V 381


>At2g43850.1 68415.m05451 ankyrin protein kinase, putative (APK1)
           similar to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674;contains Pfam profile PF00069:
           Protein kinase domain; contains Pfam profile PF00023:
           Ankyrin repeat
          Length = 479

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -1

Query: 557 KEMLLSRNVNLHISKFNIADQAGMSNDSMPSCFGDSHIFESNYIISHSFQVSDALIIDMR 378
           K +LL R   L IS F +   + +S D        +HI  SNY I+   +V    I D+R
Sbjct: 323 KNILLDRGGQLKISGFGMIRLSKISQDKAKVANHKAHIDLSNYYIAP--EVYKDEIFDLR 380

Query: 377 V 375
           V
Sbjct: 381 V 381


>At2g31760.1 68415.m03878 zinc finger protein-related contains low
           similarity to zinc finger proteins and Pfam PF01485: IBR
           domain
          Length = 514

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/49 (20%), Positives = 21/49 (42%)
 Frame = +3

Query: 159 HSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEEFINDHIREVKN 305
           H  C +CG  +      N ++    H K       ++ + + ++R V+N
Sbjct: 302 HRFCWICGKSYSDHYACNNYVEDADHDKRTLLQSEIKRYTHYYVRWVEN 350


>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
           family protein similar to Transcriptional repressor
           rco-1 (SP:P78706) [Neurospora crassa]; similar to
           TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
          Length = 648

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 153 KVHSCCLVCGNYFPTEKDANRHISKKGHKKNLEANGFVEE 272
           K H C L CG + P  K+     S+ G  +  + N F+ +
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQ 314


>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
           domain-containing protein contains Pfam domains PF00226:
           DnaJ domain and PF00096: Zinc finger, C2H2 type
          Length = 630

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 168 CLVCGNYFPTEKDANRHISKKGHKKNL 248
           C+VC   F +EK    H   K HK+ +
Sbjct: 310 CIVCSKKFKSEKQWKNHEQSKKHKEKV 336


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,861,875
Number of Sequences: 28952
Number of extensions: 348271
Number of successful extensions: 1069
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)