Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0979
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   1.9  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   1.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   1.9  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   1.9  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   1.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.6  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 387 RVPPLSLFLSSCRRQP 340
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLTLCHAEP 17


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 387 RVPPLSLFLSSCRRQP 340
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLTLCHAEP 17


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 387 RVPPLSLFLSSCRRQP 340
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLALCHAEP 17


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 387 RVPPLSLFLSSCRRQP 340
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLTLCHAEP 17


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 387 RVPPLSLFLSSCRRQP 340
           RV PL++FL+ C  +P
Sbjct: 2   RVVPLAIFLTLCHAEP 17


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 578 EQTALGSLGAVQSPL 534
           +  ++GSLGA QSPL
Sbjct: 12  QNLSMGSLGAPQSPL 26


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 321 LVAFTINFSSVSCFKTSP 268
           +VAF + FSSVS F   P
Sbjct: 31  MVAFYVVFSSVSTFFKIP 48


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 321 LVAFTINFSSVSCFKTSP 268
           +VAF + FSSVS F   P
Sbjct: 31  MVAFYVVFSSVSTFFKIP 48


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 242 LSDHFHSCHIVWSNLLVGHDLL*VL 168
           L   F + H  W++  VG+ ++ +L
Sbjct: 56  LGRDFRAIHFTWASARVGYTIVTIL 80


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 242 LSDHFHSCHIVWSNLLVGHDLL*VL 168
           L   F + H  W++  VG+ ++ +L
Sbjct: 56  LGRDFRAIHFTWASARVGYTIVTIL 80


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 242 LSDHFHSCHIVWSNLLVGHDLL*VL 168
           L   F + H  W++  VG+ ++ +L
Sbjct: 56  LGRDFRAIHFTWASARVGYTIVTIL 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,240
Number of Sequences: 336
Number of extensions: 2588
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)