Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0979
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 277 4e-75
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 88 4e-18
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 62 4e-10
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 38 0.006
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3) 33 0.13
SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058) 33 0.17
SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33) 33 0.22
SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0) 32 0.29
SB_870| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09) 32 0.29
SB_56686| Best HMM Match : Cadherin (HMM E-Value=0) 32 0.39
SB_32575| Best HMM Match : SNF7 (HMM E-Value=1.1) 32 0.39
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 31 0.51
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 31 0.51
SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18) 31 0.51
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_10910| Best HMM Match : Peptidase_M41 (HMM E-Value=0.6) 31 0.68
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_11059| Best HMM Match : KID (HMM E-Value=0.046) 30 1.2
SB_23641| Best HMM Match : DUF837 (HMM E-Value=0.37) 30 1.2
SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_22253| Best HMM Match : Pkinase (HMM E-Value=0) 29 2.1
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 29 2.1
SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_4672| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 2.7
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 29 2.7
SB_8536| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 3.6
SB_34818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_2668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_43701| Best HMM Match : ubiquitin (HMM E-Value=0.003) 28 4.8
SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 28 4.8
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_4559| Best HMM Match : ICAM_N (HMM E-Value=5.3) 28 4.8
SB_35430| Best HMM Match : Vicilin_N (HMM E-Value=0.43) 28 6.3
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 6.3
SB_24811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0) 28 6.3
SB_29416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 27 8.4
SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11) 27 8.4
SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07) 27 8.4
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056) 27 8.4
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 277 bits (680), Expect = 4e-75
Identities = 130/155 (83%), Positives = 146/155 (94%)
Frame = +2
Query: 110 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQL 289
REKA +Y+KKL+EH+E+++RLKE R+QLKD TK+YDKSENDLKALQSVGQIVGEVLKQL
Sbjct: 7 REKALLEYKKKLLEHRELDARLKEMREQLKDFTKEYDKSENDLKALQSVGQIVGEVLKQL 66
Query: 290 TEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSH 469
TEEKFIVKATNGPRYVVGCRRQ+DK KLK GTRVALDMTTLTIMR+LPREVDPLVYNMSH
Sbjct: 67 TEEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVYNMSH 126
Query: 470 EDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
EDPG+++YS +GGL EQIR+LREVIELPL NPELF
Sbjct: 127 EDPGNISYSDVGGLSEQIRELREVIELPLTNPELF 161
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 88.2 bits (209), Expect = 4e-18
Identities = 48/167 (28%), Positives = 95/167 (56%)
Frame = +2
Query: 74 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQS 253
T+ + S ++P + + Y+K + + +E + + +D+ K+L K+ ++ ++K +QS
Sbjct: 24 TISSLCSPVDPEMDDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQS 83
Query: 254 VGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLP 433
V ++G+ L+ + + IV +T G Y V +DK LK VAL + ++ LP
Sbjct: 84 VPLVIGQFLEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILP 143
Query: 434 REVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
E D + +++E+ +V+Y+ IGG+ Q +++RE +ELPL + EL+
Sbjct: 144 PEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELY 190
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 68.1 bits (159), Expect = 5e-12
Identities = 37/138 (26%), Positives = 73/138 (52%)
Frame = +2
Query: 161 VESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVV 340
+E + +++LK +++++ + + L+ VG + + + + IV + G + V
Sbjct: 269 MEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYV 328
Query: 341 GCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGGLQEQ 520
+DK+ L+ G V L+ ++ L + DP+V M E +Y+ IGGL Q
Sbjct: 329 SILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVTVMKLEKAPQESYADIGGLDTQ 388
Query: 521 IRQLREVIELPLMNPELF 574
I++++E +ELPL +PEL+
Sbjct: 389 IQEIKESVELPLTHPELY 406
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 65.7 bits (153), Expect = 3e-11
Identities = 49/145 (33%), Positives = 77/145 (53%)
Frame = +2
Query: 140 KLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKAT 319
KL+ +++++ L+ Q +L + +L+ LQ G VGEV+K + ++K +VK
Sbjct: 83 KLVVTEKIKN-LRRLEAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVH 141
Query: 320 NGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSA 499
++VV +DK +DM EVDPLV M E D TY
Sbjct: 142 PEGKFVV----DIDKG---------IDMA----------EVDPLVSLMMVEKVPDSTYEM 178
Query: 500 IGGLQEQIRQLREVIELPLMNPELF 574
+GGL +QI++++EVIELP+ +PELF
Sbjct: 179 VGGLDKQIKEIKEVIELPVKHPELF 203
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +2
Query: 428 LPREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNPELFV 577
LP ++DP V M E+ DVTYS IGG +EQI +LREV+E PL++PE FV
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFV 111
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +2
Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574
V++ +IGGL+ QI+ +RE+IE+PL NPELF
Sbjct: 253 VSFQSIGGLKTQIQAVREMIEMPLTNPELF 282
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 485 VTYSAIGGLQEQIRQLREVIELPLMNPELF 574
V +S +GG + R+L+E +E PL +PE F
Sbjct: 534 VHWSDVGGNEMIKRKLKEAVEWPLKHPEAF 563
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Frame = +2
Query: 350 RQLDKNKLKGGTR-VALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVT----YSAIGGLQ 514
R+ K+ K R + +++T I + + R+ + + +++ DP V + ++GGL
Sbjct: 831 RRKSKSMAKARNRALPINLTIEDISKGVLRDRERIGSSLADVDPMSVDRKVKFDSVGGLN 890
Query: 515 EQIRQLREVIELPLMNPELF 574
+QI+ L+E+I PL+ PE+F
Sbjct: 891 KQIQALKEMILFPLVYPEVF 910
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +2
Query: 83 ASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
+S D + L + A +D K +E +E E RL+ D+L + KQ +K+E++LKAL+
Sbjct: 1590 SSPFDFDEL-DGAKRDRDKYQLEKEEAEKRLQSYEDELNEKQKQKEKAEDNLKALK 1644
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 33.9 bits (74), Expect = 0.096
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 482 DVTYSAIGGLQEQIRQLREVIELPLMNPELF 574
D+++ +GGL ++ + I+LPL++PELF
Sbjct: 808 DISWKDVGGLDSVKEEILDTIQLPLLHPELF 838
>SB_34460| Best HMM Match : Borrelia_orfA (HMM E-Value=0.3)
Length = 1102
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 47 SLK*QFKLFTMPASTSDMEPLREKAFQDYRKKLM-EHKEVESRLKEGRDQLKDLTKQYDK 223
+LK +L + S + E A QD + +L + ++E R+ G ++K+LTK+ +
Sbjct: 537 TLKENAQLLVVLDSREERIRALEGAQQDKKAELSTDISKLEYRVNIGNSRIKELTKRNKE 596
Query: 224 SENDLKALQSVGQIVGEVLKQLTEEKFIVKA 316
S +D+K ++ ++ KQ+ ++K I +A
Sbjct: 597 SSSDIKGIKK--KLDACAKKQIADQKSIKRA 625
>SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058)
Length = 333
Score = 33.1 bits (72), Expect = 0.17
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +2
Query: 74 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSE--NDLKAL 247
T+ + + + L+ K +++LME K + S+ K+ RD+LK K E +L+AL
Sbjct: 73 TLSMTEKERDELKSKMNTGLKEELMEVKNLLSKTKQERDELKRKAATGLKEEFTEELQAL 132
Query: 248 -QSVGQIVGEVLKQLTEEKFIVKATNG 325
+ V ++ ++K L E++ V++ +G
Sbjct: 133 NEKVEKLKDLLVKALLEQEPKVQSRSG 159
>SB_50808| Best HMM Match : Ricin_B_lectin (HMM E-Value=0.33)
Length = 680
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = -2
Query: 427 MSHYCKSGHVKGNSCSSFKLVLVKLPTTANNVARAISSFYNKFFFCELFQDFSNY 263
++ YCK G ++ FK + ++ AN +AR + Y +F++ +LF + Y
Sbjct: 236 LAKYCKGGFLR----QGFKTLPLQDIVKANQIAREVIESYPEFYYLDLFYNLPKY 286
>SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1038
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +2
Query: 107 LREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQ 286
LR++ +D KK + E K+G D++ L ++++K +DLK QI+ + +Q
Sbjct: 856 LRKRVDKDL-KKSEKIGSYEEAYKKGMDEINVLNQEHNKMVDDLKR-DHREQIITLLRRQ 913
Query: 287 LTEEKFIVKATNGPRY 334
L E+ + K P+Y
Sbjct: 914 LAEQFSLAKQQLEPQY 929
>SB_870| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-09)
Length = 334
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = -3
Query: 312 FTINFSSVSCFKTSPTICPTLCRAFRSFSLLSYCLVKSFSWSRPSLSLDSTS 157
FT VSCF T PT+ ++ SF LL Y ++ + S SLS+ STS
Sbjct: 169 FTFRPDKVSCFITFYPGLPTIKSSYTSFLLLVYTVIPMVTIS--SLSIPSTS 218
>SB_56686| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1888
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEND 235
EP+ E+ Q Y + H+E+ ++LKE R + L YD + D
Sbjct: 1022 EPINERDTQIYFELASTHEELSNQLKESRPDVGGLVIVYDGDKTD 1066
>SB_32575| Best HMM Match : SNF7 (HMM E-Value=1.1)
Length = 579
Score = 31.9 bits (69), Expect = 0.39
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 113 EKAFQDYRKKLMEH-KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQL 289
EK F + +K + + KE++ +++EG D+ L K D ALQ+ E+ + +
Sbjct: 121 EKRFDNRKKAVTDKSKELDKKIQEGLDEKNALEKLGD-------ALQTTW---NEIERIV 170
Query: 290 TEEKFIVKATNGPRYVVGCRRQLDKNKL 373
T ++ I+KA N PR V + ++D K+
Sbjct: 171 TLQREILKAVN-PRVYVALKNRIDDMKI 197
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +2
Query: 74 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL----K 241
T+ + + M+ + E+ D K E+E LKE + L K +K E ++ +
Sbjct: 174 TLEQTVAKMKEVMERKGGDANKVNARVAELEKELKEKTKSAEKLVKASEKREKEVDALKR 233
Query: 242 ALQSVGQIVGEVLKQLTEEKFIVKA 316
ALQ Q++ E LTE + +++
Sbjct: 234 ALQDQDQVMEEQQDALTERQLGIES 258
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 31.5 bits (68), Expect = 0.51
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 110 REKAFQDYRKKLMEHKEVESRLKEGR-DQLKDLTKQYDKSENDLKALQSVGQIVG-EVLK 283
RE+AFQD KLM H ++ S+L + + + + D QY S D +++GQ+ G + +
Sbjct: 653 REQAFQDLATKLMSH-QINSKLAQLKPNDIPDPKWQYWPSLFD----KNIGQVAGSQQMS 707
Query: 284 QLTEEKFIVKATNGPRY 334
L E + T P Y
Sbjct: 708 VLPEGAVDLMQTEFPEY 724
>SB_14572| Best HMM Match : ANF_receptor (HMM E-Value=6.7e-18)
Length = 808
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 125 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQ 286
++ K+ + K++E RLK+ + + K+L +++E L+ + Q V E LKQ
Sbjct: 37 KELEKERAKRKDLEQRLKKLQSKEKELNSIREETEQKLREANNESQQVSENLKQ 90
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 31.1 bits (67), Expect = 0.68
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +2
Query: 155 KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTE-EKFIVKATNGPR 331
K+ SRL + ++ +K L ++ DL+ Q I +KQ E E+ + N +
Sbjct: 2124 KKKSSRLAQEKEDMKLLLEEEQTRNTDLEKKQRKFDIESNHMKQEVEHERMLKDKINREK 2183
Query: 332 YVVGCRRQLDKNKLKGG-TRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIGG 508
+ Q DK +L+ +V D+ T +H +++ + S E G+V A+
Sbjct: 2184 E----KFQADKYRLEQELDQVQEDLDRATKDKH---KLEQDLLEFSKEPGGEVNADAV-A 2235
Query: 509 LQEQIRQLREVIE 547
L+ QIR+L + ++
Sbjct: 2236 LKRQIRELEQKVQ 2248
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +2
Query: 95 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGE 274
++E L+EK+ R+ ++KE+E L E + L DL+K EN +K + + + +
Sbjct: 145 NVEELKEKSTLLEREVNQQNKEIERILSENKVTLADLSK---TQENLMKKAKELEDLQQK 201
Query: 275 VLKQ 286
+LKQ
Sbjct: 202 LLKQ 205
>SB_10910| Best HMM Match : Peptidase_M41 (HMM E-Value=0.6)
Length = 181
Score = 31.1 bits (67), Expect = 0.68
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +2
Query: 107 LREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL-KALQSVGQIVGEVLK 283
L E+ F +K+L+E E +K+ R++ + L + Y+K + L KA Q V + ++ K
Sbjct: 29 LTEEDFNK-KKELLEW-ETREEIKDIREERRILNELYNKHQTALQKATQMVTETKTKLEK 86
Query: 284 QLTEEKFIV 310
L EKF++
Sbjct: 87 HLESEKFML 95
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +2
Query: 74 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL----K 241
T+ + + M+ + E+ D K E+E LKE + L K + E ++ +
Sbjct: 618 TLEQTVAKMKEVMERKGGDANKVNARVAELEKELKEKTKSAEKLVKASENREKEIDALKR 677
Query: 242 ALQSVGQIVGEVLKQLTEEKFIVKA 316
ALQ Q++ E LTE + +++
Sbjct: 678 ALQDQDQVMEEQQDALTERQLEIES 702
>SB_11059| Best HMM Match : KID (HMM E-Value=0.046)
Length = 296
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +2
Query: 74 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL----K 241
T+ + + M+ + E+ + K E+E LKE + L K +K E ++ +
Sbjct: 82 TLEQTVAKMKEVMERKGGNANKVNARVAELEKELKEKTKSAEKLVKASEKREKEIDALKR 141
Query: 242 ALQSVGQIVGEVLKQLTEEKFIVKA 316
ALQ Q++ E LTE + +++
Sbjct: 142 ALQDQDQVMEEQQDALTERQLEIES 166
>SB_23641| Best HMM Match : DUF837 (HMM E-Value=0.37)
Length = 201
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +2
Query: 98 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK----ALQSVGQI 265
+E LRE R++ +H+ S LK+G +++ T Q ++ N+L+ +
Sbjct: 17 LEDLREVVAATEREEHAKHERRVSALKDGEKIIEERTTQLARTHNELQKQTAEYHELNTC 76
Query: 266 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTT 409
+ K L+E + + G RR+ ++ +G + D T
Sbjct: 77 IARARKDLSELELAMATRRREIEEQGLRREKEREYHEGVLQQTADRLT 124
>SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +2
Query: 125 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKF 304
+DY+ KL EHK L+ QL+ KQY + +D K GQ+ + L K+
Sbjct: 581 KDYKDKLEEHKFQVVALQTENAQLRSNVKQYKRLIDDYK-----GQVHRD---NLPGPKY 632
Query: 305 IVKATNGPRY 334
+ T PRY
Sbjct: 633 SARNTVQPRY 642
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 113 EKAFQDYRK-KLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ-SVGQIVGEVLKQ 286
EK +Q YR+ K E K + ++K ++LKD K +DLK LQ Q+V + K+
Sbjct: 579 EKKYQQYREEKEPELKSLRDQVKNLGERLKDAEFVKKKQLDDLKKLQKKYDQMVEDFEKR 638
Query: 287 L 289
+
Sbjct: 639 I 639
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 500 IGGLQEQIRQLREVIELPLMNPELF 574
+GGL+ + LR+ IE PL++PE F
Sbjct: 486 VGGLEGVKQALRQAIEWPLLHPEAF 510
>SB_22253| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 870
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 86 STSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 247
S S + EKA + +K + +ES ++ RD+ KD ++ +SEN+L L
Sbjct: 263 SGSKHDDAEEKARRKEKKMKKDRPSLESSSRKKRDKDKDAMRERLRSENELPHL 316
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 500 IGGLQEQIRQLREVIELPLMNPELF 574
+GGL+ + LR+ IE PL++PE F
Sbjct: 15 VGGLEGVKQALRQAIEWPLLHPEAF 39
>SB_43496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +2
Query: 134 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEK 301
R + EH+E E+ L+ +D+L + K Y++ + DL+ ++ Q + + EE+
Sbjct: 275 RDRRREHREEETVLR--KDELDKVAKLYEEEKQDLREMEQEFQNMEAKYNAILEER 328
>SB_4672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = +2
Query: 239 KALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTRVALDMTTLTI 418
K ++++G+ V ++ +T+EK ++K T+ P YV +K+ VA+ T+
Sbjct: 469 KTMENLGKKV--YVRLVTDEKKLLKMTSKPAYV--------SSKIFNEDLVAVHKIKETL 518
Query: 419 MRHLPREVDPLVYNMSHED 475
+ P VD L Y + ED
Sbjct: 519 TLNRPAYVDSLTYEIEAED 537
>SB_38432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +2
Query: 74 TMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
T+ + +D+E R+ + +RK++ E + +S L+ Q K+ K+ E+D+K L+
Sbjct: 367 TLQQTANDLEAQRKASEYSFRKRIHETDQAKSELEW---QQKNTMKEIATLEDDIKGLK 422
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +2
Query: 113 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
EK DYRK E+ ++ +++ +++DL D++E + +A++
Sbjct: 1229 EKLESDYRKLQQENVDLRAKVNALNKRIRDLEAAKDRAEKEKQAIK 1274
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 188 DQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKN 367
+Q++DL +YD SE K L Q V + LK+ + E + G R + + +N
Sbjct: 307 EQMRDLLDKYDHSEGQKKQLADELQNVTKKLKETSSEYERLSEELGERENLLKESEKKRN 366
Query: 368 KLK 376
+LK
Sbjct: 367 ELK 369
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 125 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 241
Q+ KKL E RL E + ++L K+ +K N+LK
Sbjct: 331 QNVTKKLKETSSEYERLSEELGERENLLKESEKKRNELK 369
>SB_8536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1029
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 107 LREKAFQDYRKKLMEHK-EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLK 283
L+ K+ ++ +K K E+E+R K D+++ K D + ALQ G+ V E +
Sbjct: 574 LQYKSLCNFEEKFNTQKREIETRAKNLDDRIEKAIKTRDNIDEFYNALQRSGEEV-ERIV 632
Query: 284 QLTEEKFIVKATNGPRYVVGCRRQL 358
L EE I++A + PR +G +++
Sbjct: 633 SLQEE--ILEAMD-PRLRMGMTKKI 654
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +2
Query: 95 DMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGE 274
D+E L + + E +E++++L + RDQ L D+ L+ E
Sbjct: 1992 DIEQLNSQISSGDVQGYEETEELKAQLSQLRDQNNKLDNDLASQSRDVITLKEENDKANE 2051
Query: 275 VLKQLTEEKFIVKATNG 325
V+KQL ++ +V T G
Sbjct: 2052 VIKQL--QRALVGKTEG 2066
>SB_34818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 92 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKAL 247
SD+E K +KK E +E RL+ D L D+ +K +++ +
Sbjct: 51 SDVEEYEGKKKAARKKKAAEKRETSKRLRPVEDDLDDIFTNVEKRRKEMEEI 102
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 REKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ 250
REK Q+ + ME++++ L E R QL+D+ + +EN+ + L+
Sbjct: 299 REKGLQN---QSMENRKLAQSLDELRQQLRDMKNKLSYAENEAQRLR 342
>SB_2668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 419 MRHL-PREVDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIELPLMNP 565
++HL PR VD ++ + P VT+ I GL+ ++E++ P++ P
Sbjct: 34 LKHLEPRMVDLIMSEIMDHGP-PVTWDDIAGLEFAKNVIKEIVVWPMLRP 82
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = +2
Query: 158 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIV 268
E +++LKE D++++L +QYD+ + L++ +++
Sbjct: 2576 EAKAKLKEVTDRMEELKRQYDEKSAQKEELRAKAELL 2612
>SB_43701| Best HMM Match : ubiquitin (HMM E-Value=0.003)
Length = 227
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/42 (35%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 173 LKEGRDQLKDLTKQYD-KSENDLKALQSVGQIVGEVLKQLTE 295
+K+G ++ L K+YD ++++++KA++SV Q VGE+ +L +
Sbjct: 155 IKKG-SRIMVLGKKYDPEADDNMKAIRSVEQQVGELKSRLDQ 195
>SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +2
Query: 134 RKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLT 292
+ L+E++E+ R+K+ R+QL+ L S+N +K L + +V E +++ T
Sbjct: 751 KTSLLENQEL--RIKKLREQLEVLESAASSSKNIVKRLHAKATVVKERIRKKT 801
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 158 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTE 295
E+E +L+ ++LKD Q K +N+L LQ+ Q LK L +
Sbjct: 907 ELEEKLRRTEEELKDRDGQVAKLDNELTKLQNDFQDTITQLKTLED 952
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +2
Query: 137 KKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDL----KALQSVGQIVGEVLKQLTE 295
K+ ++ +E+++R R+ KQ+D+SEN KAL + + V V +++TE
Sbjct: 447 KRNLQLQELKARADAAREAATSCKKQFDESENQRRQLEKALAAAREEVHSVNQKVTE 503
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +2
Query: 113 EKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQL 289
E+ Q + KL KEVE+ E DQLK ++ DK E +++ + + + E +++L
Sbjct: 13 EETLQSFLTKL---KEVEAERAELEDQLKTEEEKIDKLEGEIEQRATKEKDLKEKMRKL 68
>SB_4559| Best HMM Match : ICAM_N (HMM E-Value=5.3)
Length = 244
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 110 REKAFQDYRKKLMEHKEVESRLKEGR----DQLKDLTKQYDKSENDLKAL 247
REK + +KKL E +++E++ G DQLK L+++ D E +L AL
Sbjct: 193 REKLGRKLKKKLCEIQQLEAKKNSGGKLDCDQLKKLSRKRD-LEEELAAL 241
>SB_35430| Best HMM Match : Vicilin_N (HMM E-Value=0.43)
Length = 238
Score = 27.9 bits (59), Expect = 6.3
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +2
Query: 92 SDMEPLREKAFQDYRKKL----MEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVG 259
S M REK QD ++ + ++ RL+E D+ L + K +K L+
Sbjct: 145 SAMHDEREKKVQDLMTQMERMRAQQDQLTKRLREESDRKARLERDMQKQLQRVKELEQQT 204
Query: 260 QIVGEVLKQLTEE 298
+VLK+ TEE
Sbjct: 205 SQQQKVLKRKTEE 217
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +2
Query: 92 SDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYD 220
SD+E L+E+ +D +HK++++R + +D+L +T++ D
Sbjct: 179 SDVEELQEQV-EDMAALAKKHKQLKTRNDDLQDELDQVTRKRD 220
>SB_24811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -3
Query: 324 PLVAFTINFSSVSCFKTSPTICPTLCRAFRSFSLLSYCLVKSFSWSRPSLSLDSTSLCSM 145
PL++ S C S T+CP L + + YC + S + P LSL L S+
Sbjct: 210 PLLSVRYCLSVTVCLLLSITVCPLLSVCYCPLLFVRYCPLLSVRYC-PLLSLRYCPLLSV 268
Query: 144 SF 139
+
Sbjct: 269 RY 270
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 149 EHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGP 328
E ++ +RLKE Q++ LT+Q + L ++ V EV +L E F +A P
Sbjct: 703 ERDKMMTRLKELETQMEILTRQASEYRGKLVDVEEKPSRVREVHSELVENTFAEEAQIEP 762
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +2
Query: 236 LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKLKGGTR-VALDMTTL 412
++ L VG + + KQL + K + K +G +L +K+K R L +
Sbjct: 356 VEKLDCVGHVQKRMGKQLLKLKTLTKGKLADGRSIGGHGRLSDSKIKDIQRKYGLAIRQN 415
Query: 413 TIMRHLP--REVDPLVYNM 463
T+ R P REVD VY M
Sbjct: 416 TVKRPNPTEREVDIAVYTM 434
>SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)
Length = 758
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 232
+P R++ F++ K+ E + + K+G +LKD KQ EN
Sbjct: 238 KPDRDEMFRENMKEYEEQAKKYVKPKKGPPKLKDRLKQQQSHEN 281
>SB_29416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +2
Query: 98 MEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 277
M+ +REK Q + K+ E +E E+ K +LKD ++ + E+DL ++Q ++ E
Sbjct: 2 MDKVREK-MQGIKNKIEEAEEREAMAKM---ELKDAEERAYQHESDLDSMQKRINLLSED 57
Query: 278 LKQLTE 295
L + E
Sbjct: 58 LDKTLE 63
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 341 GCRRQLDKNKLKGGTRVALDMTTLTIMRHLPREVD 445
G LD NKL GT+++ + + + H P+ D
Sbjct: 429 GENEDLDSNKLNAGTKISEEQEQMIVDSHAPQTND 463
>SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11)
Length = 396
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 101 EPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDK 223
E +REK +D R++ ++V R + R+Q KD + DK
Sbjct: 120 EKIREKRERDRREERDRERDVRMRERFEREQEKDRERDRDK 160
>SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)
Length = 507
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 111 EKRPSRITERNS-WSIRKSSQDSKKVVTN 194
E+ SRIT+RN W ++S+ SKK TN
Sbjct: 160 EESRSRITQRNRFWIFKRSAVKSKKYDTN 188
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 158 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEV 277
E+++RL E QL+D +YD + D Q++ Q+ E+
Sbjct: 4 ELQARLAETEQQLRDALSEYDSLKRDYD--QAMAQLQEEI 41
>SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056)
Length = 416
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 65 KLFTMPASTSDMEPLREKAFQDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSEN 232
++ M + + L+E Q +++ KE R KE RD++KD + DK+ +
Sbjct: 279 QIVVMASGDENDNKLKEDELQRSKREREREKE-RDRNKEDRDRVKDRDRDRDKARD 333
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,571,717
Number of Sequences: 59808
Number of extensions: 322673
Number of successful extensions: 1037
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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