Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0979
(578 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 27 0.58
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 1.3
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 4.1
EF519497-1|ABP68546.1| 180|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519496-1|ABP68545.1| 233|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519495-1|ABP68544.1| 233|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519493-1|ABP68542.1| 233|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519492-1|ABP68541.1| 180|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519487-1|ABP68536.1| 233|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519485-1|ABP68534.1| 233|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519484-1|ABP68533.1| 212|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519483-1|ABP68532.1| 233|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519482-1|ABP68531.1| 233|Anopheles gambiae ENSANGG00000019219... 23 5.4
EF519481-1|ABP68530.1| 233|Anopheles gambiae ENSANGG00000019219... 23 5.4
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 5.4
Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein. 23 9.5
EF426240-1|ABO26483.1| 64|Anopheles gambiae unknown protein. 23 9.5
AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein. 23 9.5
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 26.6 bits (56), Expect = 0.58
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 158 EVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKAT 319
EV R R+ + DL Q +K+EN++ L + + +LTE K +++ T
Sbjct: 84 EVIPRTPNSREII-DLEAQLEKTENEIVELSENNNALLQNFMELTELKHVLEKT 136
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 25.4 bits (53), Expect = 1.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 125 QDYRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLKALQ-SVGQIVGEVLKQLTE 295
Q +K L E K + RDQ + ++D++ + LKA + ++V E +KQ E
Sbjct: 309 QQIQKYLCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDE 366
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 23.8 bits (49), Expect = 4.1
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 155 KEVESRLKEGRDQLKDLTKQYDKSENDLKALQSVGQIVGEVLKQLT---EEKFIVKATNG 325
KE++ R E R+Q +DL +Q K + ++ Q E+ +L EEK VK
Sbjct: 643 KELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDEEK--VKFERS 700
Query: 326 PRYVVGCRRQLDKNKLK 376
R ++ + LD+ + K
Sbjct: 701 CRTII--EQLLDQQRRK 715
>EF519497-1|ABP68546.1| 180|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 180
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519496-1|ABP68545.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519495-1|ABP68544.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519493-1|ABP68542.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519492-1|ABP68541.1| 180|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 180
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519487-1|ABP68536.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519485-1|ABP68534.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519484-1|ABP68533.1| 212|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 212
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 123 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 158
>EF519483-1|ABP68532.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519482-1|ABP68531.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>EF519481-1|ABP68530.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 23.4 bits (48), Expect = 5.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 440 VDPLVYNMSHEDPGDVTYSAIGGLQEQIRQLREVIE 547
VD +Y + G + + A+G Q+ ++ +R +IE
Sbjct: 144 VDGRLYELDGLKEGPIDHGAVGPGQDWLQVVRPIIE 179
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 23.4 bits (48), Expect = 5.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 131 YRKKLMEHKEVESRLKEGRDQLKDLTKQYDKSENDLK 241
+ K K ++ LK Q+KD +K ++DLK
Sbjct: 385 FSSKEERDKWIQGELKSLNKQIKDKISHQNKLQDDLK 421
>Y17688-1|CAA76813.1| 153|Anopheles gambiae gSG1 protein protein.
Length = 153
Score = 22.6 bits (46), Expect = 9.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 284 VSRLLQLFVQHFVGLSDHFHSCHIVWSNLLV 192
V +L++ V +G + SC +WSNLL+
Sbjct: 22 VIQLVRGMVTRLLGPNQAALSCDNLWSNLLL 52
>EF426240-1|ABO26483.1| 64|Anopheles gambiae unknown protein.
Length = 64
Score = 22.6 bits (46), Expect = 9.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 380 GTRVALDMTTLTIMRHLPREVDPLVYNMSHEDPGDVTYSAIG 505
G +VA ++RHL E + + + DP T + +G
Sbjct: 17 GAQVAGGFMWWWVLRHLFHEYEHITGEFDYPDPSSWTNAELG 58
>AJ130949-1|CAA10258.1| 401|Anopheles gambiae SG1 protein protein.
Length = 401
Score = 22.6 bits (46), Expect = 9.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 284 VSRLLQLFVQHFVGLSDHFHSCHIVWSNLLV 192
V +L++ V +G + SC +WSNLL+
Sbjct: 22 VIQLVRGMVTRLLGPNQAALSCDNLWSNLLL 52
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,781
Number of Sequences: 2352
Number of extensions: 10528
Number of successful extensions: 34
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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